RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 PLAC8L1A1L4L8 177 aa7.9□□□□□ -1.15
HIF3A-205ENST00000377670 SPINK6Q6UWN8 80 aa7.9□□□□□ -1.15
HIF3A-205ENST00000377670 CASC2Q6XLA1 102 aa7.9□□□□□ -1.15
HIF3A-205ENST00000377670 Q6ZTC4 211 aa7.9□□□□□ -1.15
HIF3A-205ENST00000377670 LINC00310P59036 64 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 KRTAP24-1Q3LI83 254 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 PPDPFQ9H3Y8 114 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 M0QY20 66 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 LST1O00453 97 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 TIMM17BO60830 172 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 PRR9Q5T870 116 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 AKAP13Q12802 2813 aa7.89□□□□□ -1.15
HIF3A-205ENST00000377670 TET2Q6N021 2002 aaPredicted RBP7.89□□□□□ -1.15
HIF3A-205ENST00000377670 NRACQ8N912 160 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 PTPRBP23467 1997 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 XAGE1AQ9HD64 81 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 DCANP1Q8TF63 244 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 IBA57-AS1B1ANH7 110 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 C1orf195Q5TG92 126 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 HRCT1Q6UXD1 115 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 C11orf21Q9P2W6 132 aa7.88□□□□□ -1.15
HIF3A-205ENST00000377670 RPL28P46779 137 aaKnown RBP7.87□□□□□ -1.15
HIF3A-205ENST00000377670 ATP5EP56381 51 aaPredicted RBP7.87□□□□□ -1.15
HIF3A-205ENST00000377670 C6orf99Q4VX62 202 aa7.87□□□□□ -1.15
HIF3A-205ENST00000377670 C3orf84H3BNL1 204 aa7.86□□□□□ -1.15
HIF3A-205ENST00000377670 J3QL48 77 aa7.86□□□□□ -1.15
HIF3A-205ENST00000377670 NDUFC1O43677 76 aa7.86□□□□□ -1.15
HIF3A-205ENST00000377670 PRR4Q16378 134 aa7.86□□□□□ -1.15
HIF3A-205ENST00000377670 CCKP06307 115 aa7.85□□□□□ -1.15
HIF3A-205ENST00000377670 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
HIF3A-205ENST00000377670 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
HIF3A-205ENST00000377670 TSHBP01222 138 aa7.85□□□□□ -1.15
HIF3A-205ENST00000377670 TRBV27A0A0K0K1C4 114 aa7.85□□□□□ -1.15
HIF3A-205ENST00000377670 C1orf158Q8N1D5 194 aa7.85□□□□□ -1.15
HIF3A-205ENST00000377670 FRYQ5TBA9 3013 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 IGKV2-28A0A075B6P5 120 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 IGKV2D-28P01615 120 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 FHL3Q13643 280 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 MUC7Q8TAX7 377 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 URB1-AS1Q96HZ7 61 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 MDFIQ99750 246 aa7.84□□□□□ -1.15
HIF3A-205ENST00000377670 Q6Q795 121 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 CD164L2Q6UWJ8 174 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 SMIM11BQ8TCY0 68 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 FAM19A3Q7Z5A8 133 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 A6NED7 52 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 ODF3L2Q3SX64 289 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 PYGO1Q9Y3Y4 419 aa7.83□□□□□ -1.16
HIF3A-205ENST00000377670 USP34Q70CQ2 3546 aa7.82□□□□□ -1.16
HIF3A-205ENST00000377670 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
HIF3A-205ENST00000377670 AGRNO00468 2067 aa7.82□□□□□ -1.16
HIF3A-205ENST00000377670 CRIP2P52943 208 aaPredicted RBP7.82□□□□□ -1.16
HIF3A-205ENST00000377670 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
HIF3A-205ENST00000377670 RNASE3P12724 160 aaKnown RBP7.82□□□□□ -1.16
HIF3A-205ENST00000377670 Q6JHZ5 121 aa7.81□□□□□ -1.16
HIF3A-205ENST00000377670 Q6ZQY7 126 aa7.81□□□□□ -1.16
HIF3A-205ENST00000377670 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
HIF3A-205ENST00000377670 CFAP46Q8IYW2 2715 aa7.8□□□□□ -1.16
HIF3A-205ENST00000377670 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
HIF3A-205ENST00000377670 C1orf137Q5JT78 98 aa7.8□□□□□ -1.16
HIF3A-205ENST00000377670 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
HIF3A-205ENST00000377670 WFDC13Q8IUB5 93 aa7.8□□□□□ -1.16
HIF3A-205ENST00000377670 POM121L12Q8N7R1 296 aa7.8□□□□□ -1.16
HIF3A-205ENST00000377670 F8P00451 2351 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 A0A087WVE0 104 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 NBEAQ8NFP9 2946 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 USP24Q9UPU5 2620 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 LINC01556Q5JQF7 62 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 CHCHD7Q9BUK0 85 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
HIF3A-205ENST00000377670 SOSTDC1Q6X4U4 206 aa7.78□□□□□ -1.16
HIF3A-205ENST00000377670 POLR2KP53803 58 aaKnown RBP7.78□□□□□ -1.16
HIF3A-205ENST00000377670 M0R378 163 aa7.78□□□□□ -1.16
HIF3A-205ENST00000377670 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
HIF3A-205ENST00000377670 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
HIF3A-205ENST00000377670 SPATA3Q8NHX4 192 aa7.77□□□□□ -1.17
HIF3A-205ENST00000377670 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
HIF3A-205ENST00000377670 LINC00959A0A1B0GUT2 108 aa7.76□□□□□ -1.17
HIF3A-205ENST00000377670 IGIPA6NJ69 53 aa7.75□□□□□ -1.17
HIF3A-205ENST00000377670 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
HIF3A-205ENST00000377670 DMXL2Q8TDJ6 3036 aa7.75□□□□□ -1.17
HIF3A-205ENST00000377670 CELA1Q9UNI1 258 aa7.75□□□□□ -1.17
HIF3A-205ENST00000377670 TNRC18O15417 2968 aaPredicted RBP7.75□□□□□ -1.17
HIF3A-205ENST00000377670 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
HIF3A-205ENST00000377670 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
HIF3A-205ENST00000377670 TRAV7A0A075B6U4 112 aa7.74□□□□□ -1.17
HIF3A-205ENST00000377670 KLLNB2CW77 178 aa7.74□□□□□ -1.17
HIF3A-205ENST00000377670 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
HIF3A-205ENST00000377670 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
HIF3A-205ENST00000377670 CFAP47Q6ZTR5 3102 aa7.72□□□□□ -1.17
HIF3A-205ENST00000377670 A0A087WYN8 130 aa7.72□□□□□ -1.17
HIF3A-205ENST00000377670 K7ERS5 55 aa7.72□□□□□ -1.17
HIF3A-205ENST00000377670 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
HIF3A-205ENST00000377670 CSDC2Q9Y534 153 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms