RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 Q8N9L7 120 aa9.64□□□□□ -0.87
GPC6-201ENST00000377047 ESRGQ1W209 222 aa9.64□□□□□ -0.87
GPC6-201ENST00000377047 PRR15LQ9BU68 103 aa9.64□□□□□ -0.87
GPC6-201ENST00000377047 NTM-AS1Q6ZSK4 140 aa9.63□□□□□ -0.87
GPC6-201ENST00000377047 A0A1B0GUV1 79 aa9.63□□□□□ -0.87
GPC6-201ENST00000377047 PRR4Q16378 134 aa9.63□□□□□ -0.87
GPC6-201ENST00000377047 Q9BRP9 147 aa9.63□□□□□ -0.87
GPC6-201ENST00000377047 TSPEAR-AS2P59090 65 aa9.63□□□□□ -0.87
GPC6-201ENST00000377047 AMELXQ99217 191 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 MDFIQ99750 246 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 C2orf48Q96LS8 159 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 F8WDY8 70 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 IGHV6-1A0A0B4J1U7 121 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 Q6ZVQ6 151 aa9.62□□□□□ -0.87
GPC6-201ENST00000377047 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
GPC6-201ENST00000377047 TLN1Q9Y490 2541 aaKnown RBP9.61□□□□□ -0.87
GPC6-201ENST00000377047 A0A087WYN8 130 aa9.61□□□□□ -0.87
GPC6-201ENST00000377047 Q6ZRU5 148 aa9.61□□□□□ -0.87
GPC6-201ENST00000377047 COX8CQ7Z4L0 72 aa9.61□□□□□ -0.87
GPC6-201ENST00000377047 SERP1Q9Y6X1 66 aa9.61□□□□□ -0.87
GPC6-201ENST00000377047 TET2Q6N021 2002 aaPredicted RBP9.59□□□□□ -0.87
GPC6-201ENST00000377047 ADAMTSL4-AS1Q5T5F5 129 aa9.59□□□□□ -0.87
GPC6-201ENST00000377047 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
GPC6-201ENST00000377047 PRYO14603 147 aa9.59□□□□□ -0.87
GPC6-201ENST00000377047 COL4A2P08572 1712 aa9.58□□□□□ -0.88
GPC6-201ENST00000377047 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
GPC6-201ENST00000377047 AGRNO00468 2067 aa9.58□□□□□ -0.88
GPC6-201ENST00000377047 Q6JHZ5 121 aa9.57□□□□□ -0.88
GPC6-201ENST00000377047 WDR87Q6ZQQ6 2873 aa9.56□□□□□ -0.88
GPC6-201ENST00000377047 SERP2Q8N6R1 65 aa9.56□□□□□ -0.88
GPC6-201ENST00000377047 JMJD1CQ15652 2540 aa9.56□□□□□ -0.88
GPC6-201ENST00000377047 LINC00310P59036 64 aa9.56□□□□□ -0.88
GPC6-201ENST00000377047 PRLHP81277 87 aa9.56□□□□□ -0.88
GPC6-201ENST00000377047 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
GPC6-201ENST00000377047 SBSPONQ8IVN8 264 aa9.55□□□□□ -0.88
GPC6-201ENST00000377047 NDUFC1O43677 76 aa9.55□□□□□ -0.88
GPC6-201ENST00000377047 MYO9AB2RTY4 2548 aa9.54□□□□□ -0.88
GPC6-201ENST00000377047 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
GPC6-201ENST00000377047 LRRK2Q5S007 2527 aa9.53□□□□□ -0.88
GPC6-201ENST00000377047 IMUPQ9GZP8 106 aa9.53□□□□□ -0.88
GPC6-201ENST00000377047 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
GPC6-201ENST00000377047 A8MTW9 85 aa9.53□□□□□ -0.88
GPC6-201ENST00000377047 A0A087WSZ3 146 aa9.52□□□□□ -0.89
GPC6-201ENST00000377047 DEFB116Q30KQ4 102 aa9.52□□□□□ -0.89
GPC6-201ENST00000377047 ATP5EP56381 51 aaPredicted RBP9.52□□□□□ -0.89
GPC6-201ENST00000377047 DOPEY1Q5JWR5 2465 aa9.51□□□□□ -0.89
GPC6-201ENST00000377047 X6R8D5 127 aa9.51□□□□□ -0.89
GPC6-201ENST00000377047 V9GYY9 64 aa9.51□□□□□ -0.89
GPC6-201ENST00000377047 LINC01547P58512 204 aaPredicted RBP9.5□□□□□ -0.89
GPC6-201ENST00000377047 LINC00208Q96KT6 92 aa9.5□□□□□ -0.89
GPC6-201ENST00000377047 LINC00575Q6W349 94 aa9.5□□□□□ -0.89
GPC6-201ENST00000377047 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
GPC6-201ENST00000377047 SMCR5Q8TEV8 140 aa9.5□□□□□ -0.89
GPC6-201ENST00000377047 LIMD2Q9BT23 127 aa9.49□□□□□ -0.89
GPC6-201ENST00000377047 ZFYVE26Q68DK2 2539 aa9.49□□□□□ -0.89
GPC6-201ENST00000377047 A0A096LNJ9 63 aa9.49□□□□□ -0.89
GPC6-201ENST00000377047 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
GPC6-201ENST00000377047 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
GPC6-201ENST00000377047 A6NED7 52 aa9.47□□□□□ -0.89
GPC6-201ENST00000377047 XGP55808 180 aa9.46□□□□□ -0.89
GPC6-201ENST00000377047 COX7CP15954 63 aa9.46□□□□□ -0.9
GPC6-201ENST00000377047 COL27A1Q8IZC6 1860 aaPredicted RBP9.45□□□□□ -0.9
GPC6-201ENST00000377047 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
GPC6-201ENST00000377047 ANKRD11Q6UB99 2663 aaPredicted RBP9.45□□□□□ -0.9
GPC6-201ENST00000377047 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
GPC6-201ENST00000377047 PTPRBP23467 1997 aa9.44□□□□□ -0.9
GPC6-201ENST00000377047 A0A087WVE0 104 aa9.44□□□□□ -0.9
GPC6-201ENST00000377047 FAM19A4Q96LR4 140 aa9.44□□□□□ -0.9
GPC6-201ENST00000377047 LINC00315P59091 139 aa9.44□□□□□ -0.9
GPC6-201ENST00000377047 SPINK1P00995 79 aa9.43□□□□□ -0.9
GPC6-201ENST00000377047 TRBV7-6A0A0J9YX20 115 aa9.43□□□□□ -0.9
GPC6-201ENST00000377047 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
GPC6-201ENST00000377047 TRAV7A0A075B6U4 112 aa9.42□□□□□ -0.9
GPC6-201ENST00000377047 A0A0U1RQV1 116 aa9.42□□□□□ -0.9
GPC6-201ENST00000377047 CCDC179H3BU77 68 aa9.42□□□□□ -0.9
GPC6-201ENST00000377047 TLN2Q9Y4G6 2542 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 H3BNG1 76 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 Q6Q795 121 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 SPACA4Q8TDM5 124 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 LINC00167Q96N53 147 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 RTL8CO15255 209 aa9.41□□□□□ -0.9
GPC6-201ENST00000377047 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.9
GPC6-201ENST00000377047 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
GPC6-201ENST00000377047 CEP295Q9C0D2 2601 aa9.4□□□□□ -0.9
GPC6-201ENST00000377047 NBDYA0A0U1RRE5 68 aa9.4□□□□□ -0.91
GPC6-201ENST00000377047 Q8N3U1 123 aa9.4□□□□□ -0.91
GPC6-201ENST00000377047 HCG22E2RYF7 251 aa9.39□□□□□ -0.91
GPC6-201ENST00000377047 H0Y9P7 68 aa9.39□□□□□ -0.91
GPC6-201ENST00000377047 MOBPQ13875 183 aa9.39□□□□□ -0.91
GPC6-201ENST00000377047 C16orf90A8MZG2 172 aa9.39□□□□□ -0.91
GPC6-201ENST00000377047 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
GPC6-201ENST00000377047 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
GPC6-201ENST00000377047 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
GPC6-201ENST00000377047 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
GPC6-201ENST00000377047 Q8NAQ8 132 aa9.37□□□□□ -0.91
GPC6-201ENST00000377047 USP9XQ93008 2570 aaPredicted RBP9.37□□□□□ -0.91
GPC6-201ENST00000377047 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
GPC6-201ENST00000377047 LINC00588Q9Y4M8 146 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms