RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 C6orf226Q5I0X4 101 aa17.58■□□□□ 0.41
C9orf40-201ENST00000376854 C11orf68Q9H3H3 251 aaKnown RBP17.58■□□□□ 0.41
C9orf40-201ENST00000376854 TRBV7-7A0A0K0K1E9 115 aa17.58■□□□□ 0.4
C9orf40-201ENST00000376854 OTOGQ6ZRI0 2925 aa17.57■□□□□ 0.4
C9orf40-201ENST00000376854 FN1P02751 2386 aaKnown RBP17.57■□□□□ 0.4
C9orf40-201ENST00000376854 MALP21145 153 aa17.57■□□□□ 0.4
C9orf40-201ENST00000376854 NBEAL2Q6ZNJ1 2754 aa17.57■□□□□ 0.4
C9orf40-201ENST00000376854 SS18Q15532 418 aa17.56■□□□□ 0.4
C9orf40-201ENST00000376854 A0A087WYN8 130 aa17.55■□□□□ 0.4
C9orf40-201ENST00000376854 PAX4O43316 350 aa17.55■□□□□ 0.4
C9orf40-201ENST00000376854 X6R8D5 127 aa17.55■□□□□ 0.4
C9orf40-201ENST00000376854 A0A1B0GUV1 79 aa17.55■□□□□ 0.4
C9orf40-201ENST00000376854 LY6G6DO95868 133 aa17.55■□□□□ 0.4
C9orf40-201ENST00000376854 DNAL4O96015 105 aa17.54■□□□□ 0.4
C9orf40-201ENST00000376854 LINC00482Q8N8I6 264 aa17.54■□□□□ 0.4
C9orf40-201ENST00000376854 SPATA3Q8NHX4 192 aa17.54■□□□□ 0.4
C9orf40-201ENST00000376854 SMCR5Q8TEV8 140 aa17.54■□□□□ 0.4
C9orf40-201ENST00000376854 A0A096LPF7 62 aa17.53■□□□□ 0.4
C9orf40-201ENST00000376854 INAFM2P0DMQ5 153 aa17.53■□□□□ 0.4
C9orf40-201ENST00000376854 CLPSL2Q6UWE3 100 aa17.53■□□□□ 0.4
C9orf40-201ENST00000376854 PRO0255Q9UI72 69 aa17.53■□□□□ 0.4
C9orf40-201ENST00000376854 B5MCH6 92 aa17.53■□□□□ 0.4
C9orf40-201ENST00000376854 H0YGX0 51 aa17.53■□□□□ 0.4
C9orf40-201ENST00000376854 CCDC179H3BU77 68 aa17.52■□□□□ 0.4
C9orf40-201ENST00000376854 OR13C6PQ8NH95 151 aa17.51■□□□□ 0.39
C9orf40-201ENST00000376854 TENM1Q9UKZ4 2725 aa17.51■□□□□ 0.39
C9orf40-201ENST00000376854 SMIM9A6NGZ8 99 aa17.5■□□□□ 0.39
C9orf40-201ENST00000376854 Q8IZM0 81 aa17.5■□□□□ 0.39
C9orf40-201ENST00000376854 LINC00643Q86TS7 51 aa17.49■□□□□ 0.39
C9orf40-201ENST00000376854 ATP5G1P05496 136 aa17.48■□□□□ 0.39
C9orf40-201ENST00000376854 GAGE2AQ6NT46 116 aa17.48■□□□□ 0.39
C9orf40-201ENST00000376854 IMUPQ9GZP8 106 aa17.48■□□□□ 0.39
C9orf40-201ENST00000376854 SDIM1Q6ZPB5 146 aa17.47■□□□□ 0.39
C9orf40-201ENST00000376854 NSD1Q96L73 2696 aaPredicted RBP17.46■□□□□ 0.39
C9orf40-201ENST00000376854 SS18L2Q9UHA2 77 aa17.46■□□□□ 0.38
C9orf40-201ENST00000376854 LECT2O14960 151 aa17.45■□□□□ 0.38
C9orf40-201ENST00000376854 LINC01561Q8N1V8 128 aa17.44■□□□□ 0.38
C9orf40-201ENST00000376854 LYRM9A8MSI8 78 aa17.43■□□□□ 0.38
C9orf40-201ENST00000376854 INAFM1C9JVW0 142 aa17.43■□□□□ 0.38
C9orf40-201ENST00000376854 LINC00269Q8N2A0 174 aa17.43■□□□□ 0.38
C9orf40-201ENST00000376854 C9orf129Q5T035 196 aaKnown RBP17.42■□□□□ 0.38
C9orf40-201ENST00000376854 DEFB4AO15263 64 aa17.41■□□□□ 0.38
C9orf40-201ENST00000376854 FAM236AA0A1B0GUQ0 79 aa17.41■□□□□ 0.38
C9orf40-201ENST00000376854 FAM236BA0A1B0GV22 79 aa17.41■□□□□ 0.38
C9orf40-201ENST00000376854 CD164L2Q6UWJ8 174 aa17.39■□□□□ 0.38
C9orf40-201ENST00000376854 C14orf132Q9NPU4 83 aa17.39■□□□□ 0.38
C9orf40-201ENST00000376854 DEFB135Q30KP9 77 aa17.39■□□□□ 0.37
C9orf40-201ENST00000376854 KIAA0087Q14695 138 aa17.37■□□□□ 0.37
C9orf40-201ENST00000376854 CHCHD10Q8WYQ3 142 aaPredicted RBP17.37■□□□□ 0.37
C9orf40-201ENST00000376854 OBSCN-AS1Q96MR7 158 aa17.37■□□□□ 0.37
C9orf40-201ENST00000376854 SLPIP03973 132 aa17.37■□□□□ 0.37
C9orf40-201ENST00000376854 C9orf66Q5T8R8 295 aa17.37■□□□□ 0.37
C9orf40-201ENST00000376854 CFAP161Q6P656 301 aa17.37■□□□□ 0.37
C9orf40-201ENST00000376854 Q8N3U1 123 aa17.37■□□□□ 0.37
C9orf40-201ENST00000376854 IGLV10-54A0A075B6I4 117 aa17.36■□□□□ 0.37
C9orf40-201ENST00000376854 ANGP03950 147 aaKnown RBP17.36■□□□□ 0.37
C9orf40-201ENST00000376854 PRR3P79522 188 aaKnown RBP17.35■□□□□ 0.37
C9orf40-201ENST00000376854 CXCL5P42830 114 aa17.34■□□□□ 0.37
C9orf40-201ENST00000376854 REG3AQ06141 175 aa17.34■□□□□ 0.37
C9orf40-201ENST00000376854 COX17Q14061 63 aa17.33■□□□□ 0.37
C9orf40-201ENST00000376854 HIVEP1P15822 2718 aa17.33■□□□□ 0.36
C9orf40-201ENST00000376854 IGHV4-28A0A0C4DH34 117 aa17.33■□□□□ 0.36
C9orf40-201ENST00000376854 DAD1P61803 113 aa17.33■□□□□ 0.36
C9orf40-201ENST00000376854 ORMDL1Q9P0S3 153 aa17.33■□□□□ 0.36
C9orf40-201ENST00000376854 KLK5Q9Y337 293 aaPredicted RBP17.32■□□□□ 0.36
C9orf40-201ENST00000376854 ATRQ13535 2644 aa17.32■□□□□ 0.36
C9orf40-201ENST00000376854 TRRAPQ9Y4A5 3859 aa17.32■□□□□ 0.36
C9orf40-201ENST00000376854 NCR3O14931 201 aa17.32■□□□□ 0.36
C9orf40-201ENST00000376854 NANOS2P60321 138 aaKnown RBP17.32■□□□□ 0.36
C9orf40-201ENST00000376854 NDUFC2O95298 119 aa17.3■□□□□ 0.36
C9orf40-201ENST00000376854 APOC4P55056 127 aa17.3■□□□□ 0.36
C9orf40-201ENST00000376854 C9orf116Q5BN46 136 aaPredicted RBP17.29■□□□□ 0.36
C9orf40-201ENST00000376854 CELA1Q9UNI1 258 aa17.27■□□□□ 0.36
C9orf40-201ENST00000376854 TMEM126AQ9H061 195 aa17.27■□□□□ 0.35
C9orf40-201ENST00000376854 LINC00167Q96N53 147 aa17.26■□□□□ 0.35
C9orf40-201ENST00000376854 TEP1Q99973 2627 aaKnown RBP17.25■□□□□ 0.35
C9orf40-201ENST00000376854 A0A1B0GX51 115 aa17.25■□□□□ 0.35
C9orf40-201ENST00000376854 LINC00846Q9NV44 126 aa17.25■□□□□ 0.35
C9orf40-201ENST00000376854 Q8N814 137 aa17.24■□□□□ 0.35
C9orf40-201ENST00000376854 Q8NAQ8 132 aa17.24■□□□□ 0.35
C9orf40-201ENST00000376854 HTN3P15516 51 aa17.21■□□□□ 0.35
C9orf40-201ENST00000376854 MIFP14174 115 aa17.21■□□□□ 0.35
C9orf40-201ENST00000376854 Q8NDZ9 215 aa17.21■□□□□ 0.35
C9orf40-201ENST00000376854 LELP1Q5T871 98 aa17.19■□□□□ 0.34
C9orf40-201ENST00000376854 C6orf223Q8N319 242 aa17.19■□□□□ 0.34
C9orf40-201ENST00000376854 SPART-AS1P0CW21 52 aa17.18■□□□□ 0.34
C9orf40-201ENST00000376854 SPAG11BQ08648 103 aa17.18■□□□□ 0.34
C9orf40-201ENST00000376854 C10orf25Q5T742 122 aa17.18■□□□□ 0.34
C9orf40-201ENST00000376854 UNQ6190/PRO20217Q6UXQ8 127 aa17.18■□□□□ 0.34
C9orf40-201ENST00000376854 C6orf99Q4VX62 202 aa17.17■□□□□ 0.34
C9orf40-201ENST00000376854 Q6JHZ5 121 aa17.17■□□□□ 0.34
C9orf40-201ENST00000376854 IGKV3D-7A0A0C4DH55 119 aa17.16■□□□□ 0.34
C9orf40-201ENST00000376854 TMEM256-PLSCR3K7ERE1 68 aa17.16■□□□□ 0.34
C9orf40-201ENST00000376854 CCKP06307 115 aa17.16■□□□□ 0.34
C9orf40-201ENST00000376854 S100A7L2Q5SY68 101 aa17.16■□□□□ 0.34
C9orf40-201ENST00000376854 JMJD7-PLA2G4BH0Y9G9 81 aa17.16■□□□□ 0.34
C9orf40-201ENST00000376854 C3orf56Q8N813 242 aa17.16■□□□□ 0.34
C9orf40-201ENST00000376854 C3orf22Q8N5N4 141 aa17.15■□□□□ 0.34
C9orf40-201ENST00000376854 LINC00526Q96FQ7 95 aa17.15■□□□□ 0.34
C9orf40-201ENST00000376854 HIST1H4AP62805 103 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms