RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PPDPFQ9H3Y8 114 aa9.67□□□□□ -0.86
C9orf47-203ENST00000375851 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
C9orf47-203ENST00000375851 A0A1B0GUV1 79 aa9.66□□□□□ -0.86
C9orf47-203ENST00000375851 LINC00315P59091 139 aa9.66□□□□□ -0.86
C9orf47-203ENST00000375851 PRR3P79522 188 aaKnown RBP9.66□□□□□ -0.86
C9orf47-203ENST00000375851 UQCRQO14949 82 aa9.65□□□□□ -0.86
C9orf47-203ENST00000375851 RPL28P46779 137 aaKnown RBP9.65□□□□□ -0.87
C9orf47-203ENST00000375851 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.65□□□□□ -0.87
C9orf47-203ENST00000375851 FAM19A4Q96LR4 140 aa9.65□□□□□ -0.87
C9orf47-203ENST00000375851 C5orf42Q9H799 3197 aa9.64□□□□□ -0.87
C9orf47-203ENST00000375851 J3KT08 172 aa9.64□□□□□ -0.87
C9orf47-203ENST00000375851 TRBV10-3A0A0K0K1G6 114 aa9.63□□□□□ -0.87
C9orf47-203ENST00000375851 CHKB-CPT1BH3BT56 60 aa9.63□□□□□ -0.87
C9orf47-203ENST00000375851 XGP55808 180 aa9.63□□□□□ -0.87
C9orf47-203ENST00000375851 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
C9orf47-203ENST00000375851 LY6G6CO95867 125 aa9.62□□□□□ -0.87
C9orf47-203ENST00000375851 C7orf33Q8WU49 177 aa9.62□□□□□ -0.87
C9orf47-203ENST00000375851 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
C9orf47-203ENST00000375851 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
C9orf47-203ENST00000375851 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
C9orf47-203ENST00000375851 IGKV4-1P06312 121 aa9.61□□□□□ -0.87
C9orf47-203ENST00000375851 NTM-AS1Q6ZSK4 140 aa9.61□□□□□ -0.87
C9orf47-203ENST00000375851 FHL3Q13643 280 aa9.61□□□□□ -0.87
C9orf47-203ENST00000375851 C6orf223Q8N319 242 aa9.6□□□□□ -0.87
C9orf47-203ENST00000375851 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
C9orf47-203ENST00000375851 USP17L23D6RBM5 183 aa9.6□□□□□ -0.87
C9orf47-203ENST00000375851 COL27A1Q8IZC6 1860 aaPredicted RBP9.59□□□□□ -0.87
C9orf47-203ENST00000375851 Q8N814 137 aa9.59□□□□□ -0.87
C9orf47-203ENST00000375851 LINC01546A6NGU7 62 aa9.58□□□□□ -0.88
C9orf47-203ENST00000375851 HTTP42858 3142 aa9.58□□□□□ -0.88
C9orf47-203ENST00000375851 LINC00474Q9P2X8 69 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 CHD9Q3L8U1 2897 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 A0A087WYN8 130 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 PLAC8L1A1L4L8 177 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 NUPR2A6NF83 97 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 NDUFC2-KCTD14E9PQ53 114 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 M0QXV9 152 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 C3orf22Q8N5N4 141 aa9.57□□□□□ -0.88
C9orf47-203ENST00000375851 CENPEQ02224 2701 aa9.56□□□□□ -0.88
C9orf47-203ENST00000375851 Q9UF83 564 aa9.56□□□□□ -0.88
C9orf47-203ENST00000375851 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
C9orf47-203ENST00000375851 FAM240AA0A1B0GVK7 77 aa9.56□□□□□ -0.88
C9orf47-203ENST00000375851 IGHV3OR16-9A0A0B4J2B5 98 aa9.55□□□□□ -0.88
C9orf47-203ENST00000375851 NDUFC2O95298 119 aa9.55□□□□□ -0.88
C9orf47-203ENST00000375851 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
C9orf47-203ENST00000375851 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
C9orf47-203ENST00000375851 KLK9Q2XQG4 91 aa9.54□□□□□ -0.88
C9orf47-203ENST00000375851 ZNF706Q9Y5V0 76 aaPredicted RBP9.54□□□□□ -0.88
C9orf47-203ENST00000375851 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
C9orf47-203ENST00000375851 WFDC13Q8IUB5 93 aa9.54□□□□□ -0.88
C9orf47-203ENST00000375851 BPTFQ12830 3046 aa9.54□□□□□ -0.88
C9orf47-203ENST00000375851 FSHBP01225 129 aa9.54□□□□□ -0.88
C9orf47-203ENST00000375851 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
C9orf47-203ENST00000375851 C2orf48Q96LS8 159 aa9.53□□□□□ -0.88
C9orf47-203ENST00000375851 LINC00337Q8N6G1 96 aa9.53□□□□□ -0.88
C9orf47-203ENST00000375851 Q6JHZ5 121 aa9.52□□□□□ -0.88
C9orf47-203ENST00000375851 IGLV9-49A0A0B4J1Y8 123 aa9.52□□□□□ -0.89
C9orf47-203ENST00000375851 HRCT1Q6UXD1 115 aa9.52□□□□□ -0.89
C9orf47-203ENST00000375851 FAM19A3Q7Z5A8 133 aa9.52□□□□□ -0.89
C9orf47-203ENST00000375851 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
C9orf47-203ENST00000375851 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
C9orf47-203ENST00000375851 Q6ZRU5 148 aa9.51□□□□□ -0.89
C9orf47-203ENST00000375851 C1orf137Q5JT78 98 aa9.5□□□□□ -0.89
C9orf47-203ENST00000375851 MAST4O15021 2626 aa9.5□□□□□ -0.89
C9orf47-203ENST00000375851 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
C9orf47-203ENST00000375851 A8MTW9 85 aa9.49□□□□□ -0.89
C9orf47-203ENST00000375851 X6R8D5 127 aa9.49□□□□□ -0.89
C9orf47-203ENST00000375851 ATRQ13535 2644 aa9.49□□□□□ -0.89
C9orf47-203ENST00000375851 F8WDY8 70 aa9.49□□□□□ -0.89
C9orf47-203ENST00000375851 COX7CP15954 63 aa9.48□□□□□ -0.89
C9orf47-203ENST00000375851 SNURFQ9Y675 71 aa9.48□□□□□ -0.89
C9orf47-203ENST00000375851 Q6Q795 121 aa9.47□□□□□ -0.89
C9orf47-203ENST00000375851 CCDC179H3BU77 68 aa9.46□□□□□ -0.9
C9orf47-203ENST00000375851 LAMA3Q16787 3333 aa9.46□□□□□ -0.9
C9orf47-203ENST00000375851 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
C9orf47-203ENST00000375851 ESRGQ1W209 222 aa9.45□□□□□ -0.9
C9orf47-203ENST00000375851 C10orf25Q5T742 122 aa9.45□□□□□ -0.9
C9orf47-203ENST00000375851 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
C9orf47-203ENST00000375851 MRPL55Q7Z7F7 128 aaKnown RBP9.45□□□□□ -0.9
C9orf47-203ENST00000375851 A0A087WVE0 104 aa9.45□□□□□ -0.9
C9orf47-203ENST00000375851 FLNAP21333 2647 aaKnown RBP9.45□□□□□ -0.9
C9orf47-203ENST00000375851 KRTAP24-1Q3LI83 254 aa9.44□□□□□ -0.9
C9orf47-203ENST00000375851 MKI67P46013 3256 aaKnown RBP9.43□□□□□ -0.9
C9orf47-203ENST00000375851 LINC01556Q5JQF7 62 aa9.43□□□□□ -0.9
C9orf47-203ENST00000375851 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
C9orf47-203ENST00000375851 NDUFC1O43677 76 aa9.43□□□□□ -0.9
C9orf47-203ENST00000375851 HELZ2Q9BYK8 2649 aaKnown RBP9.42□□□□□ -0.9
C9orf47-203ENST00000375851 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
C9orf47-203ENST00000375851 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
C9orf47-203ENST00000375851 PRYO14603 147 aa9.41□□□□□ -0.9
C9orf47-203ENST00000375851 ITPR3Q14573 2671 aa9.41□□□□□ -0.9
C9orf47-203ENST00000375851 PRR4Q16378 134 aa9.4□□□□□ -0.9
C9orf47-203ENST00000375851 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.91
C9orf47-203ENST00000375851 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
C9orf47-203ENST00000375851 NHLRC4P0CG21 123 aaPredicted RBP9.39□□□□□ -0.91
C9orf47-203ENST00000375851 LINC00846Q9NV44 126 aa9.39□□□□□ -0.91
C9orf47-203ENST00000375851 FAM30AQ9NZY2 134 aa9.39□□□□□ -0.91
C9orf47-203ENST00000375851 SEC61GP60059 68 aa9.39□□□□□ -0.91
C9orf47-203ENST00000375851 SBSPONQ8IVN8 264 aa9.38□□□□□ -0.91
C9orf47-203ENST00000375851 Q9BRP9 147 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms