RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 GAGE2EQ4V326 116 aa12.39□□□□□ -0.43
C6orf48-205ENST00000375640 SPINK6Q6UWN8 80 aa12.39□□□□□ -0.43
C6orf48-205ENST00000375640 GAGE2DQ9UEU5 116 aa12.39□□□□□ -0.43
C6orf48-205ENST00000375640 TINCRA0A1B0GVN0 87 aa12.38□□□□□ -0.43
C6orf48-205ENST00000375640 NDUFC2-KCTD14E9PQ53 114 aa12.38□□□□□ -0.43
C6orf48-205ENST00000375640 LINC00614P0C842 121 aa12.38□□□□□ -0.43
C6orf48-205ENST00000375640 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
C6orf48-205ENST00000375640 SERTAD4-AS1Q5TG53 156 aa12.38□□□□□ -0.43
C6orf48-205ENST00000375640 PMVKQ15126 192 aa12.37□□□□□ -0.43
C6orf48-205ENST00000375640 PHF5AQ7RTV0 110 aaKnown RBP12.37□□□□□ -0.43
C6orf48-205ENST00000375640 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
C6orf48-205ENST00000375640 C18orf32Q8TCD1 76 aa12.36□□□□□ -0.43
C6orf48-205ENST00000375640 IGLV5-45A0A087WSX0 123 aa12.35□□□□□ -0.43
C6orf48-205ENST00000375640 MT1HL1P0DM35 61 aa12.35□□□□□ -0.43
C6orf48-205ENST00000375640 FAM168BA1KXE4 195 aa12.34□□□□□ -0.43
C6orf48-205ENST00000375640 CXCL5P42830 114 aa12.34□□□□□ -0.43
C6orf48-205ENST00000375640 RAB5BP61020 215 aa12.34□□□□□ -0.43
C6orf48-205ENST00000375640 PDZD11Q5EBL8 140 aa12.34□□□□□ -0.43
C6orf48-205ENST00000375640 URB1-AS1Q96HZ7 61 aa12.34□□□□□ -0.43
C6orf48-205ENST00000375640 PSORS1C2Q9UIG4 136 aa12.34□□□□□ -0.43
C6orf48-205ENST00000375640 F8VRH5 84 aa12.33□□□□□ -0.44
C6orf48-205ENST00000375640 A0A096LNJ9 63 aa12.32□□□□□ -0.44
C6orf48-205ENST00000375640 SMIM1B2RUZ4 78 aa12.32□□□□□ -0.44
C6orf48-205ENST00000375640 LINC01600Q96MT4 127 aa12.32□□□□□ -0.44
C6orf48-205ENST00000375640 YPEL4Q96NS1 127 aa12.32□□□□□ -0.44
C6orf48-205ENST00000375640 HBDP02042 147 aa12.31□□□□□ -0.44
C6orf48-205ENST00000375640 C9orf129Q5T035 196 aaKnown RBP12.31□□□□□ -0.44
C6orf48-205ENST00000375640 REG3GQ6UW15 175 aa12.31□□□□□ -0.44
C6orf48-205ENST00000375640 FAM19A5Q7Z5A7 132 aaPredicted RBP12.31□□□□□ -0.44
C6orf48-205ENST00000375640 C1orf137Q5JT78 98 aa12.3□□□□□ -0.44
C6orf48-205ENST00000375640 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
C6orf48-205ENST00000375640 COX7B2Q8TF08 81 aa12.3□□□□□ -0.44
C6orf48-205ENST00000375640 H3BRM9 83 aa12.29□□□□□ -0.44
C6orf48-205ENST00000375640 NDUFA6P56556 154 aa12.28□□□□□ -0.44
C6orf48-205ENST00000375640 M0QXV9 152 aa12.27□□□□□ -0.45
C6orf48-205ENST00000375640 ATP5LO75964 103 aa12.27□□□□□ -0.45
C6orf48-205ENST00000375640 IGLC3P0DOY3 106 aa12.27□□□□□ -0.45
C6orf48-205ENST00000375640 SPINK8P0C7L1 97 aa12.26□□□□□ -0.45
C6orf48-205ENST00000375640 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
C6orf48-205ENST00000375640 IGLV7-43P04211 117 aa12.24□□□□□ -0.45
C6orf48-205ENST00000375640 UBE2BP63146 152 aa12.24□□□□□ -0.45
C6orf48-205ENST00000375640 ODF1Q14990 250 aa12.24□□□□□ -0.45
C6orf48-205ENST00000375640 KRTAP11-1Q8IUC1 163 aa12.24□□□□□ -0.45
C6orf48-205ENST00000375640 CHCHD1Q96BP2 118 aaKnown RBP12.24□□□□□ -0.45
C6orf48-205ENST00000375640 XAGE1AQ9HD64 81 aa12.24□□□□□ -0.45
C6orf48-205ENST00000375640 HMCN2Q8NDA2 5059 aa12.22□□□□□ -0.45
C6orf48-205ENST00000375640 BAGE3Q86Y29 109 aa12.22□□□□□ -0.45
C6orf48-205ENST00000375640 IGLV5-39A0A0G2JS06 123 aa12.21□□□□□ -0.45
C6orf48-205ENST00000375640 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
C6orf48-205ENST00000375640 KRTAP10-8P60410 259 aa12.21□□□□□ -0.45
C6orf48-205ENST00000375640 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
C6orf48-205ENST00000375640 CBLN2Q8IUK8 224 aa12.21□□□□□ -0.45
C6orf48-205ENST00000375640 PLA2G2DQ9UNK4 145 aa12.21□□□□□ -0.45
C6orf48-205ENST00000375640 C22orf24Q9Y442 160 aa12.21□□□□□ -0.45
C6orf48-205ENST00000375640 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
C6orf48-205ENST00000375640 TNXBP22105 4242 aa12.2□□□□□ -0.46
C6orf48-205ENST00000375640 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
C6orf48-205ENST00000375640 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
C6orf48-205ENST00000375640 TP73-AS1Q9UF72 201 aa12.18□□□□□ -0.46
C6orf48-205ENST00000375640 C11orf86A6NJI1 115 aa12.17□□□□□ -0.46
C6orf48-205ENST00000375640 SLC7A5P1Q8MH63 180 aa12.17□□□□□ -0.46
C6orf48-205ENST00000375640 CHTOPQ9Y3Y2 248 aaKnown RBP12.16□□□□□ -0.46
C6orf48-205ENST00000375640 TRAV12-1A0A0B4J245 112 aa12.15□□□□□ -0.46
C6orf48-205ENST00000375640 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
C6orf48-205ENST00000375640 IFI27L1Q96BM0 104 aa12.15□□□□□ -0.46
C6orf48-205ENST00000375640 TRGC2P03986 189 aa12.14□□□□□ -0.47
C6orf48-205ENST00000375640 MRPL55Q7Z7F7 128 aaKnown RBP12.14□□□□□ -0.47
C6orf48-205ENST00000375640 H0Y9J4 135 aa12.13□□□□□ -0.47
C6orf48-205ENST00000375640 NUPR1O60356 82 aa12.13□□□□□ -0.47
C6orf48-205ENST00000375640 HSBP1O75506 76 aa12.13□□□□□ -0.47
C6orf48-205ENST00000375640 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
C6orf48-205ENST00000375640 COX17Q14061 63 aa12.11□□□□□ -0.47
C6orf48-205ENST00000375640 IGLV5-37A0A075B6J1 123 aa12.1□□□□□ -0.47
C6orf48-205ENST00000375640 PFN2P35080 140 aa12.1□□□□□ -0.47
C6orf48-205ENST00000375640 FAM19A2Q8N3H0 131 aa12.1□□□□□ -0.47
C6orf48-205ENST00000375640 LINC00167Q96N53 147 aa12.1□□□□□ -0.47
C6orf48-205ENST00000375640 ERG28Q9UKR5 140 aa12.1□□□□□ -0.47
C6orf48-205ENST00000375640 ZNF861PO60384 105 aa12.09□□□□□ -0.47
C6orf48-205ENST00000375640 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
C6orf48-205ENST00000375640 COLCA2A8K830 154 aa12.07□□□□□ -0.48
C6orf48-205ENST00000375640 NKAPP1Q8N9T2 125 aa12.07□□□□□ -0.48
C6orf48-205ENST00000375640 ZNF625Q96I27 306 aaPredicted RBP12.07□□□□□ -0.48
C6orf48-205ENST00000375640 SND1-IT1Q9HBX3 110 aa12.06□□□□□ -0.48
C6orf48-205ENST00000375640 RPL37AP8A6NKH3 93 aa12.05□□□□□ -0.48
C6orf48-205ENST00000375640 BCE1O60756 84 aa12.05□□□□□ -0.48
C6orf48-205ENST00000375640 SERF1AO75920 110 aa12.05□□□□□ -0.48
C6orf48-205ENST00000375640 GAGE10A6NGK3 116 aa12.04□□□□□ -0.48
C6orf48-205ENST00000375640 LEPROTL1O95214 131 aa12.04□□□□□ -0.48
C6orf48-205ENST00000375640 PRR26Q8N8Z3 221 aa12.04□□□□□ -0.48
C6orf48-205ENST00000375640 IGLV1-50A0A075B6I6 118 aa12.03□□□□□ -0.48
C6orf48-205ENST00000375640 KRTAP1-4P0C5Y4 121 aa12.03□□□□□ -0.48
C6orf48-205ENST00000375640 RPL28P46779 137 aaKnown RBP12.03□□□□□ -0.48
C6orf48-205ENST00000375640 RPL24P83731 157 aaKnown RBP12.03□□□□□ -0.48
C6orf48-205ENST00000375640 LINC00310P59036 64 aa12.02□□□□□ -0.49
C6orf48-205ENST00000375640 VPREB1P12018 145 aa12.01□□□□□ -0.49
C6orf48-205ENST00000375640 LINC00158P58513 81 aa12□□□□□ -0.49
C6orf48-205ENST00000375640 HSPB8Q9UJY1 196 aa12□□□□□ -0.49
C6orf48-205ENST00000375640 H0Y8G0 127 aa11.98□□□□□ -0.49
C6orf48-205ENST00000375640 SCO1O75880 301 aa11.97□□□□□ -0.49
C6orf48-205ENST00000375640 HERV-K104P63124 156 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms