RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 ORAOV1Q8WV07 137 aa10.29□□□□□ -0.76
HDHD3-202ENST00000374180 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
HDHD3-202ENST00000374180 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
HDHD3-202ENST00000374180 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
HDHD3-202ENST00000374180 SYCNQ0VAF6 134 aa10.28□□□□□ -0.76
HDHD3-202ENST00000374180 CARD19Q96LW7 228 aa10.28□□□□□ -0.76
HDHD3-202ENST00000374180 ATP5LO75964 103 aa10.27□□□□□ -0.77
HDHD3-202ENST00000374180 C2orf48Q96LS8 159 aa10.27□□□□□ -0.77
HDHD3-202ENST00000374180 CAMK2N2Q96S95 79 aa10.27□□□□□ -0.77
HDHD3-202ENST00000374180 CHAC1Q9BUX1 264 aa10.27□□□□□ -0.77
HDHD3-202ENST00000374180 LINC01561Q8N1V8 128 aa10.26□□□□□ -0.77
HDHD3-202ENST00000374180 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
HDHD3-202ENST00000374180 COL5A1-AS1Q5SY13 56 aa10.25□□□□□ -0.77
HDHD3-202ENST00000374180 CDKN2A-AS1Q9UH64 79 aa10.25□□□□□ -0.77
HDHD3-202ENST00000374180 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
HDHD3-202ENST00000374180 Q6ZRU5 148 aa10.24□□□□□ -0.77
HDHD3-202ENST00000374180 SCXQ7RTU7 201 aa10.24□□□□□ -0.77
HDHD3-202ENST00000374180 ATOH7Q8N100 152 aa10.24□□□□□ -0.77
HDHD3-202ENST00000374180 Q8N1X5 172 aa10.24□□□□□ -0.77
HDHD3-202ENST00000374180 DPH3Q96FX2 82 aa10.24□□□□□ -0.77
HDHD3-202ENST00000374180 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
HDHD3-202ENST00000374180 F8WDY8 70 aa10.23□□□□□ -0.77
HDHD3-202ENST00000374180 LINC01545Q5VT33 79 aa10.23□□□□□ -0.77
HDHD3-202ENST00000374180 CIRBP-AS1Q8TBR5 109 aa10.23□□□□□ -0.77
HDHD3-202ENST00000374180 KRTAP17-1Q9BYP8 105 aa10.23□□□□□ -0.77
HDHD3-202ENST00000374180 PKIGQ9Y2B9 76 aa10.23□□□□□ -0.77
HDHD3-202ENST00000374180 IFI27L1Q96BM0 104 aa10.22□□□□□ -0.77
HDHD3-202ENST00000374180 PMCHL2Q9BQD1 86 aa10.22□□□□□ -0.77
HDHD3-202ENST00000374180 PANO1I0J062 215 aa10.21□□□□□ -0.78
HDHD3-202ENST00000374180 NDUFA1O15239 70 aa10.21□□□□□ -0.78
HDHD3-202ENST00000374180 PRSS2P07478 247 aa10.21□□□□□ -0.78
HDHD3-202ENST00000374180 CHTF8P0CG12 524 aa10.21□□□□□ -0.78
HDHD3-202ENST00000374180 KIAA0087Q14695 138 aa10.21□□□□□ -0.78
HDHD3-202ENST00000374180 TOMM7Q9P0U1 55 aa10.21□□□□□ -0.78
HDHD3-202ENST00000374180 IGLV5-45A0A087WSX0 123 aa10.2□□□□□ -0.78
HDHD3-202ENST00000374180 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
HDHD3-202ENST00000374180 BATFQ16520 125 aa10.2□□□□□ -0.78
HDHD3-202ENST00000374180 C6orf226Q5I0X4 101 aa10.2□□□□□ -0.78
HDHD3-202ENST00000374180 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
HDHD3-202ENST00000374180 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
HDHD3-202ENST00000374180 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
HDHD3-202ENST00000374180 MAJINQ3KP22 176 aa10.19□□□□□ -0.78
HDHD3-202ENST00000374180 SLC25A34Q6PIV7 304 aa10.19□□□□□ -0.78
HDHD3-202ENST00000374180 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
HDHD3-202ENST00000374180 LOC107984640A0A0U1RRK4 108 aa10.18□□□□□ -0.78
HDHD3-202ENST00000374180 EPM2AB3EWF7 344 aa10.18□□□□□ -0.78
HDHD3-202ENST00000374180 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
HDHD3-202ENST00000374180 C10orf25Q5T742 122 aa10.18□□□□□ -0.78
HDHD3-202ENST00000374180 SPACA4Q8TDM5 124 aa10.18□□□□□ -0.78
HDHD3-202ENST00000374180 FAT1Q14517 4588 aa10.18□□□□□ -0.78
HDHD3-202ENST00000374180 A0A096LNI7 61 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 H3BRM9 83 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 CKS1BP61024 79 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 C2orf82Q6UX34 121 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 Q8IZM0 81 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 CHTOPQ9Y3Y2 248 aaKnown RBP10.17□□□□□ -0.78
HDHD3-202ENST00000374180 A0A087WYN8 130 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 TRAV12-1A0A0B4J245 112 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
HDHD3-202ENST00000374180 VPS13BQ7Z7G8 4022 aa10.16□□□□□ -0.78
HDHD3-202ENST00000374180 H0Y8G0 127 aa10.16□□□□□ -0.78
HDHD3-202ENST00000374180 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
HDHD3-202ENST00000374180 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
HDHD3-202ENST00000374180 Q5VSD8 79 aa10.16□□□□□ -0.78
HDHD3-202ENST00000374180 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
HDHD3-202ENST00000374180 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
HDHD3-202ENST00000374180 PTTG1IPP53801 180 aa10.15□□□□□ -0.78
HDHD3-202ENST00000374180 LINC00528Q8N1L1 170 aa10.15□□□□□ -0.78
HDHD3-202ENST00000374180 TRBV30A0A0K0K1B3 111 aa10.14□□□□□ -0.79
HDHD3-202ENST00000374180 C11orf86A6NJI1 115 aa10.14□□□□□ -0.79
HDHD3-202ENST00000374180 ZNF22P17026 224 aaPredicted RBP10.14□□□□□ -0.79
HDHD3-202ENST00000374180 RPL18AQ02543 176 aaKnown RBP10.14□□□□□ -0.79
HDHD3-202ENST00000374180 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
HDHD3-202ENST00000374180 DLEU1O43261 78 aa10.13□□□□□ -0.79
HDHD3-202ENST00000374180 COX8AP10176 69 aa10.13□□□□□ -0.79
HDHD3-202ENST00000374180 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
HDHD3-202ENST00000374180 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
HDHD3-202ENST00000374180 STPG4Q8N801 248 aa10.13□□□□□ -0.79
HDHD3-202ENST00000374180 PLAC8Q9NZF1 115 aa10.13□□□□□ -0.79
HDHD3-202ENST00000374180 F8VRH5 84 aa10.11□□□□□ -0.79
HDHD3-202ENST00000374180 TLX1NBP0CAT3 122 aa10.11□□□□□ -0.79
HDHD3-202ENST00000374180 CXCL5P42830 114 aa10.11□□□□□ -0.79
HDHD3-202ENST00000374180 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
HDHD3-202ENST00000374180 ODF1Q14990 250 aa10.1□□□□□ -0.79
HDHD3-202ENST00000374180 C9orf116Q5BN46 136 aaPredicted RBP10.1□□□□□ -0.79
HDHD3-202ENST00000374180 IGLV5-39A0A0G2JS06 123 aa10.1□□□□□ -0.79
HDHD3-202ENST00000374180 Q6ZRP5 223 aa10.1□□□□□ -0.79
HDHD3-202ENST00000374180 NDUFC2-KCTD14E9PQ53 114 aa10.09□□□□□ -0.79
HDHD3-202ENST00000374180 GAGE2EQ4V326 116 aa10.08□□□□□ -0.8
HDHD3-202ENST00000374180 GAGE2DQ9UEU5 116 aa10.08□□□□□ -0.8
HDHD3-202ENST00000374180 PLNP26678 52 aa10.07□□□□□ -0.8
HDHD3-202ENST00000374180 ABCA13Q86UQ4 5058 aa10.07□□□□□ -0.8
HDHD3-202ENST00000374180 DPM2O94777 84 aa10.06□□□□□ -0.8
HDHD3-202ENST00000374180 BVES-AS1Q5T3Y7 98 aa10.06□□□□□ -0.8
HDHD3-202ENST00000374180 PCLOQ9Y6V0 5065 aa10.05□□□□□ -0.8
HDHD3-202ENST00000374180 A0A1W2PNN7 141 aa10.05□□□□□ -0.8
HDHD3-202ENST00000374180 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
HDHD3-202ENST00000374180 BOD1L2Q8IYS8 172 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms