RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 TRBV6-4A0A1B0GX49 114 aa12.9□□□□□ -0.34
MMP9-201ENST00000372330 CR1P17927 2039 aa12.9□□□□□ -0.34
MMP9-201ENST00000372330 TEX15Q9BXT5 2789 aa12.9□□□□□ -0.35
MMP9-201ENST00000372330 PAX4O43316 350 aa12.89□□□□□ -0.35
MMP9-201ENST00000372330 V9GYY9 64 aa12.89□□□□□ -0.35
MMP9-201ENST00000372330 NBPF19A0A087WUL8 3843 aa12.89□□□□□ -0.35
MMP9-201ENST00000372330 A8MTW9 85 aa12.89□□□□□ -0.35
MMP9-201ENST00000372330 IGHV4-31P0DP07 118 aa12.88□□□□□ -0.35
MMP9-201ENST00000372330 K7EQD1 137 aa12.88□□□□□ -0.35
MMP9-201ENST00000372330 Q8N814 137 aa12.88□□□□□ -0.35
MMP9-201ENST00000372330 WFDC11Q8NEX6 87 aa12.88□□□□□ -0.35
MMP9-201ENST00000372330 SORL1Q92673 2214 aa12.87□□□□□ -0.35
MMP9-201ENST00000372330 TRBV10-1A0A0K0K1A3 114 aa12.87□□□□□ -0.35
MMP9-201ENST00000372330 DEFB113Q30KQ7 82 aa12.87□□□□□ -0.35
MMP9-201ENST00000372330 LINC00482Q8N8I6 264 aa12.87□□□□□ -0.35
MMP9-201ENST00000372330 NAV2Q8IVL1 2488 aa12.87□□□□□ -0.35
MMP9-201ENST00000372330 C11orf72Q8NBR9 251 aa12.87□□□□□ -0.35
MMP9-201ENST00000372330 TRBV7-6A0A0J9YX20 115 aa12.86□□□□□ -0.35
MMP9-201ENST00000372330 F8WEM9 126 aa12.86□□□□□ -0.35
MMP9-201ENST00000372330 SEC61GP60059 68 aa12.86□□□□□ -0.35
MMP9-201ENST00000372330 RBM3P98179 157 aaKnown RBP12.85□□□□□ -0.35
MMP9-201ENST00000372330 C1orf195Q5TG92 126 aa12.85□□□□□ -0.35
MMP9-201ENST00000372330 TOMM7Q9P0U1 55 aa12.85□□□□□ -0.35
MMP9-201ENST00000372330 CREBBPQ92793 2442 aa12.85□□□□□ -0.35
MMP9-201ENST00000372330 NTM-AS1Q6ZSK4 140 aa12.84□□□□□ -0.35
MMP9-201ENST00000372330 ZNF469Q96JG9 3925 aaPredicted RBP12.84□□□□□ -0.35
MMP9-201ENST00000372330 APCP25054 2843 aa12.84□□□□□ -0.35
MMP9-201ENST00000372330 PRM2P04554 102 aa12.83□□□□□ -0.36
MMP9-201ENST00000372330 BRK1Q8WUW1 75 aa12.83□□□□□ -0.36
MMP9-201ENST00000372330 RMI2Q96E14 147 aa12.83□□□□□ -0.36
MMP9-201ENST00000372330 UBE2L6O14933 153 aa12.83□□□□□ -0.36
MMP9-201ENST00000372330 SNURFQ9Y675 71 aa12.82□□□□□ -0.36
MMP9-201ENST00000372330 SLURP1P55000 103 aa12.82□□□□□ -0.36
MMP9-201ENST00000372330 C18orf65Q6ZTR6 163 aa12.82□□□□□ -0.36
MMP9-201ENST00000372330 LINC01547P58512 204 aaPredicted RBP12.81□□□□□ -0.36
MMP9-201ENST00000372330 DEFB136Q30KP8 78 aa12.81□□□□□ -0.36
MMP9-201ENST00000372330 TENM4Q6N022 2769 aa12.8□□□□□ -0.36
MMP9-201ENST00000372330 TLN2Q9Y4G6 2542 aa12.8□□□□□ -0.36
MMP9-201ENST00000372330 LOC110117498A0A087WWA1 95 aa12.8□□□□□ -0.36
MMP9-201ENST00000372330 A0A1W2PRX2 142 aa12.8□□□□□ -0.36
MMP9-201ENST00000372330 CXCL6P80162 114 aa12.8□□□□□ -0.36
MMP9-201ENST00000372330 DEFB131AP59861 70 aa12.79□□□□□ -0.36
MMP9-201ENST00000372330 Q6ZQT0 140 aa12.79□□□□□ -0.36
MMP9-201ENST00000372330 CHD6Q8TD26 2715 aa12.79□□□□□ -0.36
MMP9-201ENST00000372330 KRTAP1-3Q8IUG1 177 aa12.78□□□□□ -0.36
MMP9-201ENST00000372330 LINC00474Q9P2X8 69 aa12.78□□□□□ -0.36
MMP9-201ENST00000372330 MYO9AB2RTY4 2548 aa12.78□□□□□ -0.36
MMP9-201ENST00000372330 TRAV10A0A0B4J240 114 aa12.78□□□□□ -0.36
MMP9-201ENST00000372330 Q6ZTI0 123 aa12.77□□□□□ -0.36
MMP9-201ENST00000372330 IGHV3OR16-9A0A0B4J2B5 98 aa12.77□□□□□ -0.37
MMP9-201ENST00000372330 A0A087WZ39 114 aa12.76□□□□□ -0.37
MMP9-201ENST00000372330 MIFP14174 115 aa12.76□□□□□ -0.37
MMP9-201ENST00000372330 PDE6GP18545 87 aa12.76□□□□□ -0.37
MMP9-201ENST00000372330 INSP01308 110 aa12.75□□□□□ -0.37
MMP9-201ENST00000372330 HAMPP81172 84 aa12.75□□□□□ -0.37
MMP9-201ENST00000372330 C4orf3Q8WVX3 66 aa12.74□□□□□ -0.37
MMP9-201ENST00000372330 TRBV7-4A0A0J9YYF1 115 aa12.74□□□□□ -0.37
MMP9-201ENST00000372330 Q6ZVQ6 151 aa12.74□□□□□ -0.37
MMP9-201ENST00000372330 AKAP9Q99996 3911 aa12.74□□□□□ -0.37
MMP9-201ENST00000372330 SONP18583 2426 aaKnown RBP12.73□□□□□ -0.37
MMP9-201ENST00000372330 ZNF561-AS1K7EIQ3 104 aa12.73□□□□□ -0.37
MMP9-201ENST00000372330 ERC2-IT1O76042 136 aa12.73□□□□□ -0.37
MMP9-201ENST00000372330 NANOS2P60321 138 aaKnown RBP12.73□□□□□ -0.37
MMP9-201ENST00000372330 ITPR3Q14573 2671 aa12.73□□□□□ -0.37
MMP9-201ENST00000372330 A0A0U1RQV1 116 aa12.72□□□□□ -0.37
MMP9-201ENST00000372330 KHDC1LQ5JSQ8 128 aa12.72□□□□□ -0.37
MMP9-201ENST00000372330 NF1P21359 2839 aa12.72□□□□□ -0.37
MMP9-201ENST00000372330 C11orf44Q8N8P7 122 aa12.72□□□□□ -0.37
MMP9-201ENST00000372330 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
MMP9-201ENST00000372330 C6orf223Q8N319 242 aa12.71□□□□□ -0.37
MMP9-201ENST00000372330 Q8N3U1 123 aa12.71□□□□□ -0.37
MMP9-201ENST00000372330 TRGV1A0A0A0MS02 117 aa12.7□□□□□ -0.38
MMP9-201ENST00000372330 DYNLRB2Q8TF09 96 aa12.7□□□□□ -0.38
MMP9-201ENST00000372330 MAP6D1Q9H9H5 199 aa12.7□□□□□ -0.38
MMP9-201ENST00000372330 KMT2BQ9UMN6 2715 aaPredicted RBP12.7□□□□□ -0.38
MMP9-201ENST00000372330 H3BQ85 93 aa12.7□□□□□ -0.38
MMP9-201ENST00000372330 RNASE1P07998 156 aaKnown RBP12.7□□□□□ -0.38
MMP9-201ENST00000372330 PLA2G2AP14555 144 aa12.69□□□□□ -0.38
MMP9-201ENST00000372330 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
MMP9-201ENST00000372330 CUBNO60494 3623 aa12.69□□□□□ -0.38
MMP9-201ENST00000372330 DEFB114Q30KQ6 69 aa12.68□□□□□ -0.38
MMP9-201ENST00000372330 TM2D3Q9BRN9 247 aa12.68□□□□□ -0.38
MMP9-201ENST00000372330 C9orf66Q5T8R8 295 aa12.67□□□□□ -0.38
MMP9-201ENST00000372330 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
MMP9-201ENST00000372330 LAMTOR3Q9UHA4 124 aa12.67□□□□□ -0.38
MMP9-201ENST00000372330 LINC00575Q6W349 94 aa12.66□□□□□ -0.38
MMP9-201ENST00000372330 TMEM254Q8TBM7 123 aa12.66□□□□□ -0.38
MMP9-201ENST00000372330 J3QKU1 62 aa12.66□□□□□ -0.38
MMP9-201ENST00000372330 IGKV3OR2-268A0A0C4DH90 116 aa12.65□□□□□ -0.38
MMP9-201ENST00000372330 NREPQ16612 68 aa12.65□□□□□ -0.39
MMP9-201ENST00000372330 FLNAP21333 2647 aaKnown RBP12.64□□□□□ -0.39
MMP9-201ENST00000372330 PDZD2O15018 2839 aa12.64□□□□□ -0.39
MMP9-201ENST00000372330 NIPBLQ6KC79 2804 aaeCLIP12.64□□□□□ -0.39
MMP9-201ENST00000372330 Q8IZM0 81 aa12.63□□□□□ -0.39
MMP9-201ENST00000372330 HELZ2Q9BYK8 2649 aaKnown RBP12.63□□□□□ -0.39
MMP9-201ENST00000372330 COX17Q14061 63 aa12.62□□□□□ -0.39
MMP9-201ENST00000372330 ESRGQ1W209 222 aa12.62□□□□□ -0.39
MMP9-201ENST00000372330 C6orf99Q4VX62 202 aa12.62□□□□□ -0.39
MMP9-201ENST00000372330 C11orf68Q9H3H3 251 aaKnown RBP12.62□□□□□ -0.39
MMP9-201ENST00000372330 MPLKIPQ8TAP9 179 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms