RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 Q6ZTC4 211 aa10.17□□□□□ -0.78
RAPGEF1-202ENST00000372190 PLCE1Q9P212 2302 aa10.17□□□□□ -0.78
RAPGEF1-202ENST00000372190 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
RAPGEF1-202ENST00000372190 Q8IZM0 81 aa10.17□□□□□ -0.78
RAPGEF1-202ENST00000372190 CSPG4Q6UVK1 2322 aa10.16□□□□□ -0.78
RAPGEF1-202ENST00000372190 ADAMTS20P59510 1910 aa10.15□□□□□ -0.78
RAPGEF1-202ENST00000372190 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
RAPGEF1-202ENST00000372190 H3BPC8 53 aa10.14□□□□□ -0.79
RAPGEF1-202ENST00000372190 KIAA1549Q9HCM3 1950 aa10.13□□□□□ -0.79
RAPGEF1-202ENST00000372190 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
RAPGEF1-202ENST00000372190 NUPR2A6NF83 97 aa10.13□□□□□ -0.79
RAPGEF1-202ENST00000372190 LINC01561Q8N1V8 128 aa10.12□□□□□ -0.79
RAPGEF1-202ENST00000372190 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
RAPGEF1-202ENST00000372190 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.12□□□□□ -0.79
RAPGEF1-202ENST00000372190 TP53AIP1Q9HCN2 124 aa10.12□□□□□ -0.79
RAPGEF1-202ENST00000372190 C6orf48Q9UBA6 75 aa10.11□□□□□ -0.79
RAPGEF1-202ENST00000372190 SBSPONQ8IVN8 264 aa10.1□□□□□ -0.79
RAPGEF1-202ENST00000372190 RAI1Q7Z5J4 1906 aaPredicted RBP10.1□□□□□ -0.79
RAPGEF1-202ENST00000372190 A0A087WSZ3 146 aa10.1□□□□□ -0.79
RAPGEF1-202ENST00000372190 C9orf116Q5BN46 136 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 CRIPTQ9P021 101 aa10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 NAV2Q8IVL1 2488 aa10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 PROK1P58294 105 aa10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 POLR2KP53803 58 aaKnown RBP10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 HIVEP3Q5T1R4 2406 aa10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 ATRXP46100 2492 aa10.09□□□□□ -0.79
RAPGEF1-202ENST00000372190 ARHGAP32A7KAX9 2087 aa10.08□□□□□ -0.8
RAPGEF1-202ENST00000372190 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
RAPGEF1-202ENST00000372190 DEFB116Q30KQ4 102 aa10.08□□□□□ -0.8
RAPGEF1-202ENST00000372190 H3BS24 57 aa10.07□□□□□ -0.8
RAPGEF1-202ENST00000372190 LINC00310P59036 64 aa10.07□□□□□ -0.8
RAPGEF1-202ENST00000372190 LINC00474Q9P2X8 69 aa10.07□□□□□ -0.8
RAPGEF1-202ENST00000372190 A8MUN3 132 aa10.07□□□□□ -0.8
RAPGEF1-202ENST00000372190 EML5Q05BV3 1969 aa10.07□□□□□ -0.8
RAPGEF1-202ENST00000372190 C11orf21Q9P2W6 132 aa10.06□□□□□ -0.8
RAPGEF1-202ENST00000372190 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
RAPGEF1-202ENST00000372190 LINC01554Q52M75 96 aa10.06□□□□□ -0.8
RAPGEF1-202ENST00000372190 PRR9Q5T870 116 aa10.06□□□□□ -0.8
RAPGEF1-202ENST00000372190 COL4A2P08572 1712 aa10.06□□□□□ -0.8
RAPGEF1-202ENST00000372190 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
RAPGEF1-202ENST00000372190 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
RAPGEF1-202ENST00000372190 PRR14LQ5THK1 2151 aa10.05□□□□□ -0.8
RAPGEF1-202ENST00000372190 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
RAPGEF1-202ENST00000372190 Q9BRP9 147 aa10.05□□□□□ -0.8
RAPGEF1-202ENST00000372190 LINC00336Q6ZUF6 198 aa10.04□□□□□ -0.8
RAPGEF1-202ENST00000372190 CIRBP-AS1Q8TBR5 109 aa10.04□□□□□ -0.8
RAPGEF1-202ENST00000372190 CYSRT1A8MQ03 144 aa10.04□□□□□ -0.8
RAPGEF1-202ENST00000372190 UQCR11O14957 56 aa10.03□□□□□ -0.8
RAPGEF1-202ENST00000372190 FSHBP01225 129 aa10.03□□□□□ -0.8
RAPGEF1-202ENST00000372190 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
RAPGEF1-202ENST00000372190 ERC2-IT1O76042 136 aa10.03□□□□□ -0.8
RAPGEF1-202ENST00000372190 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
RAPGEF1-202ENST00000372190 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 IGKV2-30P06310 120 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 BRI3O95415 125 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 LELP1Q5T871 98 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 CNFNQ9BYD5 112 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 KLLNB2CW77 178 aa10.02□□□□□ -0.81
RAPGEF1-202ENST00000372190 PIEZO2Q9H5I5 2752 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 SONP18583 2426 aaKnown RBP10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 CPAMD8Q8IZJ3 1885 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 ODF3L2Q3SX64 289 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 LINC00242Q5T6M2 205 aa10.01□□□□□ -0.81
RAPGEF1-202ENST00000372190 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
RAPGEF1-202ENST00000372190 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
RAPGEF1-202ENST00000372190 NAV3Q8IVL0 2385 aa10□□□□□ -0.81
RAPGEF1-202ENST00000372190 NHLRC4P0CG21 123 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF1-202ENST00000372190 LOC101927531A0A1B0GV80 90 aa9.99□□□□□ -0.81
RAPGEF1-202ENST00000372190 TNCP24821 2201 aa9.98□□□□□ -0.81
RAPGEF1-202ENST00000372190 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
RAPGEF1-202ENST00000372190 ZNF580Q9UK33 172 aa9.97□□□□□ -0.81
RAPGEF1-202ENST00000372190 FHL2Q14192 279 aa9.97□□□□□ -0.81
RAPGEF1-202ENST00000372190 MRGPRG-AS1Q2M3A8 158 aa9.97□□□□□ -0.81
RAPGEF1-202ENST00000372190 LUZP6Q538Z0 58 aa9.97□□□□□ -0.81
RAPGEF1-202ENST00000372190 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.82
RAPGEF1-202ENST00000372190 PRR3P79522 188 aaKnown RBP9.96□□□□□ -0.82
RAPGEF1-202ENST00000372190 A0A1B0GW54 56 aa9.95□□□□□ -0.82
RAPGEF1-202ENST00000372190 MIR22HGQ0VDD5 57 aa9.95□□□□□ -0.82
RAPGEF1-202ENST00000372190 WNK1Q9H4A3 2382 aa9.95□□□□□ -0.82
RAPGEF1-202ENST00000372190 SPATA3Q8NHX4 192 aa9.95□□□□□ -0.82
RAPGEF1-202ENST00000372190 WIPF1O43516 503 aa9.94□□□□□ -0.82
RAPGEF1-202ENST00000372190 ATG2AQ2TAZ0 1938 aa9.94□□□□□ -0.82
RAPGEF1-202ENST00000372190 ELOF1P60002 83 aaKnown RBP9.93□□□□□ -0.82
RAPGEF1-202ENST00000372190 SRCAPQ6ZRS2 3230 aa9.93□□□□□ -0.82
RAPGEF1-202ENST00000372190 TM2D3Q9BRN9 247 aa9.93□□□□□ -0.82
RAPGEF1-202ENST00000372190 COA5Q86WW8 74 aa9.92□□□□□ -0.82
RAPGEF1-202ENST00000372190 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
RAPGEF1-202ENST00000372190 TRAV22A0A0B4J277 110 aa9.92□□□□□ -0.82
RAPGEF1-202ENST00000372190 KRTAP24-1Q3LI83 254 aa9.92□□□□□ -0.82
RAPGEF1-202ENST00000372190 COX6A2Q02221 97 aa9.91□□□□□ -0.82
RAPGEF1-202ENST00000372190 PRR15Q8IV56 129 aa9.9□□□□□ -0.82
RAPGEF1-202ENST00000372190 PTPRBP23467 1997 aa9.9□□□□□ -0.82
RAPGEF1-202ENST00000372190 PRO0461Q9UI25 63 aa9.89□□□□□ -0.83
RAPGEF1-202ENST00000372190 Q8N2B8 174 aa9.89□□□□□ -0.83
RAPGEF1-202ENST00000372190 AMELXQ99217 191 aa9.89□□□□□ -0.83
RAPGEF1-202ENST00000372190 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms