RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 Q9HAA7 133 aa17.6■□□□□ 0.41
ATPAF1-202ENST00000371937 CSMD3Q7Z407 3707 aa17.59■□□□□ 0.41
ATPAF1-202ENST00000371937 DNAH7Q8WXX0 4024 aa17.58■□□□□ 0.41
ATPAF1-202ENST00000371937 RMI2Q96E14 147 aa17.58■□□□□ 0.4
ATPAF1-202ENST00000371937 RPL24P83731 157 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-202ENST00000371937 SPAG11BQ08648 103 aa17.57■□□□□ 0.4
ATPAF1-202ENST00000371937 MUSTN1Q8IVN3 82 aa17.57■□□□□ 0.4
ATPAF1-202ENST00000371937 NHP2Q9NX24 153 aaKnown RBP17.57■□□□□ 0.4
ATPAF1-202ENST00000371937 SMIM13P0DJ93 91 aa17.56■□□□□ 0.4
ATPAF1-202ENST00000371937 IFITM1P13164 125 aa17.56■□□□□ 0.4
ATPAF1-202ENST00000371937 C2orf82Q6UX34 121 aa17.55■□□□□ 0.4
ATPAF1-202ENST00000371937 COPS9Q8WXC6 57 aa17.54■□□□□ 0.4
ATPAF1-202ENST00000371937 A0A0U1RRA0 63 aa17.53■□□□□ 0.4
ATPAF1-202ENST00000371937 DAND5Q8N907 189 aa17.52■□□□□ 0.4
ATPAF1-202ENST00000371937 TAX1BP3O14907 124 aa17.51■□□□□ 0.39
ATPAF1-202ENST00000371937 MUC7Q8TAX7 377 aa17.51■□□□□ 0.39
ATPAF1-202ENST00000371937 A0A1B0GWB2 263 aa17.51■□□□□ 0.39
ATPAF1-202ENST00000371937 ERG28Q9UKR5 140 aa17.51■□□□□ 0.39
ATPAF1-202ENST00000371937 COX11Q9Y6N1 276 aa17.51■□□□□ 0.39
ATPAF1-202ENST00000371937 LINC00158P58513 81 aa17.5■□□□□ 0.39
ATPAF1-202ENST00000371937 A4D1N5 150 aa17.49■□□□□ 0.39
ATPAF1-202ENST00000371937 ZNF561-AS1K7EIQ3 104 aa17.49■□□□□ 0.39
ATPAF1-202ENST00000371937 A0A1B0GV90 55 aa17.49■□□□□ 0.39
ATPAF1-202ENST00000371937 LINC00308Q8TCZ7 52 aa17.49■□□□□ 0.39
ATPAF1-202ENST00000371937 TENM2Q9NT68 2774 aa17.48■□□□□ 0.39
ATPAF1-202ENST00000371937 PLECQ15149 4684 aaKnown RBP17.48■□□□□ 0.39
ATPAF1-202ENST00000371937 K7ERJ3 54 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 NPC2P61916 151 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 C6orf223Q8N319 242 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 C15orf56Q8N910 161 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 NTN5Q8WTR8 489 aaPredicted RBP17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 PFN2P35080 140 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 COX17Q14061 63 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 RAB37Q96AX2 223 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 PPDPFQ9H3Y8 114 aa17.47■□□□□ 0.39
ATPAF1-202ENST00000371937 MIR7-3HGQ8N6C7 128 aa17.46■□□□□ 0.39
ATPAF1-202ENST00000371937 LINC00526Q96FQ7 95 aa17.46■□□□□ 0.39
ATPAF1-202ENST00000371937 WWC2-AS2Q96NR7 200 aa17.45■□□□□ 0.38
ATPAF1-202ENST00000371937 HIGD2BQ4VC39 106 aa17.44■□□□□ 0.38
ATPAF1-202ENST00000371937 TTC32Q5I0X7 151 aa17.44■□□□□ 0.38
ATPAF1-202ENST00000371937 UNQ6190/PRO20217Q6UXQ8 127 aa17.44■□□□□ 0.38
ATPAF1-202ENST00000371937 KRTAP1-5Q9BYS1 174 aa17.44■□□□□ 0.38
ATPAF1-202ENST00000371937 CFC1BP0CG36 223 aa17.44■□□□□ 0.38
ATPAF1-202ENST00000371937 CFC1P0CG37 223 aa17.44■□□□□ 0.38
ATPAF1-202ENST00000371937 STARD9Q9P2P6 4700 aa17.43■□□□□ 0.38
ATPAF1-202ENST00000371937 C2orf48Q96LS8 159 aa17.43■□□□□ 0.38
ATPAF1-202ENST00000371937 GVQW2A0A096LPI5 108 aaPredicted RBP17.42■□□□□ 0.38
ATPAF1-202ENST00000371937 LYSTQ99698 3801 aa17.42■□□□□ 0.38
ATPAF1-202ENST00000371937 C9orf118A6NHY6 69 aa17.42■□□□□ 0.38
ATPAF1-202ENST00000371937 F8WDY8 70 aa17.42■□□□□ 0.38
ATPAF1-202ENST00000371937 EIF4EBP3O60516 100 aaPredicted RBP17.41■□□□□ 0.38
ATPAF1-202ENST00000371937 C10orf25Q5T742 122 aa17.41■□□□□ 0.38
ATPAF1-202ENST00000371937 A0A0B4J2C4 111 aa17.4■□□□□ 0.38
ATPAF1-202ENST00000371937 CAMK2N2Q96S95 79 aa17.4■□□□□ 0.38
ATPAF1-202ENST00000371937 TGP01266 2768 aa17.4■□□□□ 0.38
ATPAF1-202ENST00000371937 NBDYA0A0U1RRE5 68 aa17.4■□□□□ 0.38
ATPAF1-202ENST00000371937 SOSTDC1Q6X4U4 206 aa17.4■□□□□ 0.38
ATPAF1-202ENST00000371937 PRO1854Q9UHT4 67 aa17.38■□□□□ 0.37
ATPAF1-202ENST00000371937 DNAH1Q9P2D7 4330 aa17.38■□□□□ 0.37
ATPAF1-202ENST00000371937 TRBV30A0A0K0K1B3 111 aa17.37■□□□□ 0.37
ATPAF1-202ENST00000371937 C9orf116Q5BN46 136 aaPredicted RBP17.37■□□□□ 0.37
ATPAF1-202ENST00000371937 USP17L23D6RBM5 183 aa17.36■□□□□ 0.37
ATPAF1-202ENST00000371937 H3BUT2 72 aa17.35■□□□□ 0.37
ATPAF1-202ENST00000371937 CASC10Q5T4H9 136 aa17.35■□□□□ 0.37
ATPAF1-202ENST00000371937 C6orf48Q9UBA6 75 aa17.35■□□□□ 0.37
ATPAF1-202ENST00000371937 PGPEP1Q9NXJ5 209 aa17.34■□□□□ 0.37
ATPAF1-202ENST00000371937 PSCAO43653 123 aa17.33■□□□□ 0.36
ATPAF1-202ENST00000371937 SND1-IT1Q9HBX3 110 aa17.32■□□□□ 0.36
ATPAF1-202ENST00000371937 LOC107984156A0A0G2JMH3 177 aa17.31■□□□□ 0.36
ATPAF1-202ENST00000371937 Q6ZRU5 148 aa17.31■□□□□ 0.36
ATPAF1-202ENST00000371937 ARL17AQ8IVW1 177 aa17.31■□□□□ 0.36
ATPAF1-202ENST00000371937 NAA38Q9BRA0 125 aaKnown RBP17.31■□□□□ 0.36
ATPAF1-202ENST00000371937 SYCNQ0VAF6 134 aa17.31■□□□□ 0.36
ATPAF1-202ENST00000371937 A0A1W2PPM0 123 aa17.28■□□□□ 0.36
ATPAF1-202ENST00000371937 TSPAN13O95857 204 aa17.28■□□□□ 0.36
ATPAF1-202ENST00000371937 VAMP3Q15836 100 aa17.28■□□□□ 0.36
ATPAF1-202ENST00000371937 VPS13DQ5THJ4 4388 aa17.27■□□□□ 0.36
ATPAF1-202ENST00000371937 C3orf84H3BNL1 204 aa17.26■□□□□ 0.35
ATPAF1-202ENST00000371937 LECT2O14960 151 aa17.26■□□□□ 0.35
ATPAF1-202ENST00000371937 FABP2P12104 132 aa17.26■□□□□ 0.35
ATPAF1-202ENST00000371937 CARD19Q96LW7 228 aa17.24■□□□□ 0.35
ATPAF1-202ENST00000371937 RNF151Q2KHN1 245 aa17.24■□□□□ 0.35
ATPAF1-202ENST00000371937 TRAV13-2A0A0B4J235 113 aa17.22■□□□□ 0.35
ATPAF1-202ENST00000371937 NDUFC2-KCTD14E9PQ53 114 aa17.22■□□□□ 0.35
ATPAF1-202ENST00000371937 H7C2G1 150 aa17.22■□□□□ 0.35
ATPAF1-202ENST00000371937 Q1RN00 199 aa17.22■□□□□ 0.35
ATPAF1-202ENST00000371937 RPL13AP40429 203 aaKnown RBP17.21■□□□□ 0.35
ATPAF1-202ENST00000371937 M0R2N4 97 aa17.21■□□□□ 0.35
ATPAF1-202ENST00000371937 NDUFC2O95298 119 aa17.21■□□□□ 0.35
ATPAF1-202ENST00000371937 C14orf177Q52M58 125 aa17.21■□□□□ 0.35
ATPAF1-202ENST00000371937 IGKV2-28A0A075B6P5 120 aa17.19■□□□□ 0.34
ATPAF1-202ENST00000371937 IGKV2D-28P01615 120 aa17.19■□□□□ 0.34
ATPAF1-202ENST00000371937 SLPIP03973 132 aa17.19■□□□□ 0.34
ATPAF1-202ENST00000371937 LY6G6CO95867 125 aa17.18■□□□□ 0.34
ATPAF1-202ENST00000371937 WFDC2Q14508 124 aa17.18■□□□□ 0.34
ATPAF1-202ENST00000371937 LYRM7Q5U5X0 104 aa17.17■□□□□ 0.34
ATPAF1-202ENST00000371937 Q6ZR54 194 aa17.17■□□□□ 0.34
ATPAF1-202ENST00000371937 Q6ZRN7 208 aaPredicted RBP17.17■□□□□ 0.34
ATPAF1-202ENST00000371937 PSMB2P49721 201 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms