RNA–Protein interactions for RNA: ENST00000371520.5

ECHDC2-202, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 1,606 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-202ENST00000371520 DNAH10Q8IVF4 4471 aa13.18□□□□□ -0.3
ECHDC2-202ENST00000371520 HIGD2BQ4VC39 106 aa13.17□□□□□ -0.3
ECHDC2-202ENST00000371520 DNAH6Q9C0G6 4158 aa13.17□□□□□ -0.3
ECHDC2-202ENST00000371520 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
ECHDC2-202ENST00000371520 NTN5Q8WTR8 489 aaPredicted RBP13.17□□□□□ -0.3
ECHDC2-202ENST00000371520 LINC00526Q96FQ7 95 aa13.17□□□□□ -0.3
ECHDC2-202ENST00000371520 KMT2AQ03164 3969 aa13.16□□□□□ -0.3
ECHDC2-202ENST00000371520 USP17L23D6RBM5 183 aa13.16□□□□□ -0.3
ECHDC2-202ENST00000371520 ZNF561-AS1K7EIQ3 104 aa13.16□□□□□ -0.3
ECHDC2-202ENST00000371520 TIMM17BO60830 172 aa13.16□□□□□ -0.3
ECHDC2-202ENST00000371520 Q6ZRN7 208 aaPredicted RBP13.16□□□□□ -0.3
ECHDC2-202ENST00000371520 LITAFQ99732 161 aa13.16□□□□□ -0.3
ECHDC2-202ENST00000371520 PSCAO43653 123 aa13.15□□□□□ -0.3
ECHDC2-202ENST00000371520 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
ECHDC2-202ENST00000371520 TMEM238C9JI98 176 aa13.14□□□□□ -0.31
ECHDC2-202ENST00000371520 HSD52Q0P140 79 aa13.14□□□□□ -0.31
ECHDC2-202ENST00000371520 MEIG1Q5JSS6 88 aa13.13□□□□□ -0.31
ECHDC2-202ENST00000371520 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
ECHDC2-202ENST00000371520 TAL2Q16559 108 aa13.13□□□□□ -0.31
ECHDC2-202ENST00000371520 CIRBPQ14011 172 aaKnown RBP13.12□□□□□ -0.31
ECHDC2-202ENST00000371520 C10orf25Q5T742 122 aa13.12□□□□□ -0.31
ECHDC2-202ENST00000371520 UNQ6190/PRO20217Q6UXQ8 127 aa13.12□□□□□ -0.31
ECHDC2-202ENST00000371520 HIST1H4GQ99525 98 aa13.12□□□□□ -0.31
ECHDC2-202ENST00000371520 ADAMTSL4-AS1Q5T5F5 129 aa13.11□□□□□ -0.31
ECHDC2-202ENST00000371520 F8WDY8 70 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 LECT2O14960 151 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 SMIM13P0DJ93 91 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 WFDC2Q14508 124 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 SPANXCQ9NY87 97 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
ECHDC2-202ENST00000371520 A0A0U1RRA0 63 aa13.08□□□□□ -0.32
ECHDC2-202ENST00000371520 HINT1P49773 126 aaPredicted RBP13.08□□□□□ -0.32
ECHDC2-202ENST00000371520 Q6ZVH6 145 aa13.08□□□□□ -0.32
ECHDC2-202ENST00000371520 M0R143 59 aa13.07□□□□□ -0.32
ECHDC2-202ENST00000371520 BVES-AS1Q5T3Y7 98 aa13.07□□□□□ -0.32
ECHDC2-202ENST00000371520 CEND1Q8N111 149 aa13.07□□□□□ -0.32
ECHDC2-202ENST00000371520 C6orf48Q9UBA6 75 aa13.07□□□□□ -0.32
ECHDC2-202ENST00000371520 DNAH2Q9P225 4427 aa13.07□□□□□ -0.32
ECHDC2-202ENST00000371520 TRBV30A0A0K0K1B3 111 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 GCSHP23434 173 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 COX17Q14061 63 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 Q6ZRU5 148 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 DAND5Q8N907 189 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 LRCOL1A6NCL2 159 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 PFN2P35080 140 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 LINC00158P58513 81 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 SYCNQ0VAF6 134 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 C9orf116Q5BN46 136 aaPredicted RBP13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 SNHG12Q9BXW3 62 aa13.06□□□□□ -0.32
ECHDC2-202ENST00000371520 C1orf134Q5TEV5 83 aa13.05□□□□□ -0.32
ECHDC2-202ENST00000371520 EREGO14944 169 aa13.04□□□□□ -0.32
ECHDC2-202ENST00000371520 SLPIP03973 132 aa13.04□□□□□ -0.32
ECHDC2-202ENST00000371520 C14orf177Q52M58 125 aa13.04□□□□□ -0.32
ECHDC2-202ENST00000371520 MIR7-3HGQ8N6C7 128 aa13.04□□□□□ -0.32
ECHDC2-202ENST00000371520 FXYD2P54710 66 aa13.03□□□□□ -0.32
ECHDC2-202ENST00000371520 IFITM1P13164 125 aa13.02□□□□□ -0.32
ECHDC2-202ENST00000371520 PTTG1IPP53801 180 aa13.02□□□□□ -0.32
ECHDC2-202ENST00000371520 BATFQ16520 125 aa13.02□□□□□ -0.32
ECHDC2-202ENST00000371520 MUSTN1Q8IVN3 82 aa13.02□□□□□ -0.32
ECHDC2-202ENST00000371520 CARD19Q96LW7 228 aa13.02□□□□□ -0.32
ECHDC2-202ENST00000371520 NPC2P61916 151 aa13.01□□□□□ -0.33
ECHDC2-202ENST00000371520 LINC00308Q8TCZ7 52 aa13.01□□□□□ -0.33
ECHDC2-202ENST00000371520 LCE6AA0A183 80 aa13□□□□□ -0.33
ECHDC2-202ENST00000371520 EIF4EBP3O60516 100 aaPredicted RBP13□□□□□ -0.33
ECHDC2-202ENST00000371520 SOSTDC1Q6X4U4 206 aa13□□□□□ -0.33
ECHDC2-202ENST00000371520 RNF151Q2KHN1 245 aa12.99□□□□□ -0.33
ECHDC2-202ENST00000371520 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
ECHDC2-202ENST00000371520 PPDPFQ9H3Y8 114 aa12.99□□□□□ -0.33
ECHDC2-202ENST00000371520 SACSQ9NZJ4 4579 aa12.99□□□□□ -0.33
ECHDC2-202ENST00000371520 CNBPP62633 177 aaKnown RBP12.99□□□□□ -0.33
ECHDC2-202ENST00000371520 RPL24P83731 157 aaKnown RBP12.99□□□□□ -0.33
ECHDC2-202ENST00000371520 HYDINQ4G0P3 5121 aa12.98□□□□□ -0.33
ECHDC2-202ENST00000371520 A0A087WTM6 91 aa12.98□□□□□ -0.33
ECHDC2-202ENST00000371520 TMEM238LA0A1B0GVL6 79 aa12.97□□□□□ -0.33
ECHDC2-202ENST00000371520 A6NJY4 79 aa12.97□□□□□ -0.33
ECHDC2-202ENST00000371520 A4D1N5 150 aa12.95□□□□□ -0.34
ECHDC2-202ENST00000371520 NDUFC2-KCTD14E9PQ53 114 aa12.95□□□□□ -0.34
ECHDC2-202ENST00000371520 Q8N814 137 aa12.95□□□□□ -0.34
ECHDC2-202ENST00000371520 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
ECHDC2-202ENST00000371520 DNAH17Q9UFH2 4485 aa12.95□□□□□ -0.34
ECHDC2-202ENST00000371520 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.95□□□□□ -0.34
ECHDC2-202ENST00000371520 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.94□□□□□ -0.34
ECHDC2-202ENST00000371520 LOC107984156A0A0G2JMH3 177 aa12.94□□□□□ -0.34
ECHDC2-202ENST00000371520 A6NDN8 102 aa12.94□□□□□ -0.34
ECHDC2-202ENST00000371520 TLX1NBP0CAT3 122 aa12.94□□□□□ -0.34
ECHDC2-202ENST00000371520 ARL17AQ8IVW1 177 aa12.94□□□□□ -0.34
ECHDC2-202ENST00000371520 NHP2Q9NX24 153 aaKnown RBP12.94□□□□□ -0.34
ECHDC2-202ENST00000371520 FRAS1Q86XX4 4008 aa12.93□□□□□ -0.34
ECHDC2-202ENST00000371520 A0A1B0GWB2 263 aa12.92□□□□□ -0.34
ECHDC2-202ENST00000371520 RTL8CO15255 209 aa12.92□□□□□ -0.34
ECHDC2-202ENST00000371520 Q6ZRP5 223 aa12.91□□□□□ -0.34
ECHDC2-202ENST00000371520 COL5A1-AS1Q5SY13 56 aa12.91□□□□□ -0.34
ECHDC2-202ENST00000371520 CFC1BP0CG36 223 aa12.9□□□□□ -0.34
ECHDC2-202ENST00000371520 CFC1P0CG37 223 aa12.9□□□□□ -0.34
ECHDC2-202ENST00000371520 K7ERJ3 54 aa12.89□□□□□ -0.35
ECHDC2-202ENST00000371520 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
ECHDC2-202ENST00000371520 RPL18AQ02543 176 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms