RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 SNURFQ9Y675 71 aa13.94□□□□□ -0.18
LMO4-202ENST00000370544 NDUFC1O43677 76 aa13.91□□□□□ -0.18
LMO4-202ENST00000370544 MYO9AB2RTY4 2548 aa13.91□□□□□ -0.18
LMO4-202ENST00000370544 NDUFC2-KCTD14E9PQ53 114 aa13.91□□□□□ -0.18
LMO4-202ENST00000370544 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
LMO4-202ENST00000370544 F8WDY8 70 aa13.9□□□□□ -0.18
LMO4-202ENST00000370544 KIF25-AS1Q9Y6Z4 181 aa13.89□□□□□ -0.19
LMO4-202ENST00000370544 C1orf137Q5JT78 98 aa13.89□□□□□ -0.19
LMO4-202ENST00000370544 IGLV5-52A0A0A0MRZ9 124 aa13.89□□□□□ -0.19
LMO4-202ENST00000370544 ATP5EP56381 51 aaPredicted RBP13.88□□□□□ -0.19
LMO4-202ENST00000370544 FAM240AA0A1B0GVK7 77 aa13.88□□□□□ -0.19
LMO4-202ENST00000370544 C11orf72Q8NBR9 251 aa13.88□□□□□ -0.19
LMO4-202ENST00000370544 C2orf48Q96LS8 159 aa13.88□□□□□ -0.19
LMO4-202ENST00000370544 FAM30AQ9NZY2 134 aa13.87□□□□□ -0.19
LMO4-202ENST00000370544 COX7CP15954 63 aa13.87□□□□□ -0.19
LMO4-202ENST00000370544 LINC01561Q8N1V8 128 aa13.86□□□□□ -0.19
LMO4-202ENST00000370544 SPTSSBQ8NFR3 76 aa13.86□□□□□ -0.19
LMO4-202ENST00000370544 COL4A2P08572 1712 aa13.84□□□□□ -0.19
LMO4-202ENST00000370544 MRPL55Q7Z7F7 128 aaKnown RBP13.83□□□□□ -0.2
LMO4-202ENST00000370544 CCDC179H3BU77 68 aa13.83□□□□□ -0.2
LMO4-202ENST00000370544 CELA1Q9UNI1 258 aa13.82□□□□□ -0.2
LMO4-202ENST00000370544 FAM19A4Q96LR4 140 aa13.82□□□□□ -0.2
LMO4-202ENST00000370544 PRR4Q16378 134 aa13.81□□□□□ -0.2
LMO4-202ENST00000370544 Q8N9L7 120 aa13.81□□□□□ -0.2
LMO4-202ENST00000370544 FHL3Q13643 280 aa13.8□□□□□ -0.2
LMO4-202ENST00000370544 PRYO14603 147 aa13.8□□□□□ -0.2
LMO4-202ENST00000370544 Q6Q795 121 aa13.8□□□□□ -0.2
LMO4-202ENST00000370544 PRR15LQ9BU68 103 aa13.8□□□□□ -0.2
LMO4-202ENST00000370544 Q6ZRU5 148 aa13.8□□□□□ -0.2
LMO4-202ENST00000370544 LINC01546A6NGU7 62 aa13.79□□□□□ -0.2
LMO4-202ENST00000370544 CIRBP-AS1Q8TBR5 109 aa13.79□□□□□ -0.2
LMO4-202ENST00000370544 SVIPQ8NHG7 77 aa13.79□□□□□ -0.2
LMO4-202ENST00000370544 V9GYY9 64 aa13.79□□□□□ -0.2
LMO4-202ENST00000370544 LINC01556Q5JQF7 62 aa13.78□□□□□ -0.2
LMO4-202ENST00000370544 Q9BRP9 147 aa13.78□□□□□ -0.2
LMO4-202ENST00000370544 C1orf134Q5TEV5 83 aa13.77□□□□□ -0.2
LMO4-202ENST00000370544 LINC00315P59091 139 aa13.76□□□□□ -0.21
LMO4-202ENST00000370544 ESRGQ1W209 222 aa13.76□□□□□ -0.21
LMO4-202ENST00000370544 A0A087WVE0 104 aa13.75□□□□□ -0.21
LMO4-202ENST00000370544 LINC00575Q6W349 94 aa13.74□□□□□ -0.21
LMO4-202ENST00000370544 CEP295Q9C0D2 2601 aa13.74□□□□□ -0.21
LMO4-202ENST00000370544 IGLV5-39A0A0G2JS06 123 aa13.73□□□□□ -0.21
LMO4-202ENST00000370544 TRAV7A0A075B6U4 112 aa13.73□□□□□ -0.21
LMO4-202ENST00000370544 K7ERS5 55 aa13.73□□□□□ -0.21
LMO4-202ENST00000370544 LINC00337Q8N6G1 96 aa13.73□□□□□ -0.21
LMO4-202ENST00000370544 NHLRC4P0CG21 123 aaPredicted RBP13.73□□□□□ -0.21
LMO4-202ENST00000370544 AGRNO00468 2067 aa13.72□□□□□ -0.21
LMO4-202ENST00000370544 A8MTW9 85 aa13.72□□□□□ -0.21
LMO4-202ENST00000370544 ANKRD11Q6UB99 2663 aaPredicted RBP13.71□□□□□ -0.21
LMO4-202ENST00000370544 IGHV6-1A0A0B4J1U7 121 aa13.7□□□□□ -0.22
LMO4-202ENST00000370544 ABCA12Q86UK0 2595 aa13.7□□□□□ -0.22
LMO4-202ENST00000370544 JMJD1CQ15652 2540 aa13.7□□□□□ -0.22
LMO4-202ENST00000370544 IGHV3OR16-9A0A0B4J2B5 98 aa13.68□□□□□ -0.22
LMO4-202ENST00000370544 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
LMO4-202ENST00000370544 A0A087WSZ3 146 aa13.68□□□□□ -0.22
LMO4-202ENST00000370544 LINC00208Q96KT6 92 aa13.67□□□□□ -0.22
LMO4-202ENST00000370544 C22orf24Q9Y442 160 aa13.66□□□□□ -0.22
LMO4-202ENST00000370544 SERP1Q9Y6X1 66 aa13.66□□□□□ -0.22
LMO4-202ENST00000370544 PTPRBP23467 1997 aa13.66□□□□□ -0.22
LMO4-202ENST00000370544 PRLHP81277 87 aa13.66□□□□□ -0.22
LMO4-202ENST00000370544 Q8N3U1 123 aa13.66□□□□□ -0.22
LMO4-202ENST00000370544 USP9XQ93008 2570 aaPredicted RBP13.66□□□□□ -0.22
LMO4-202ENST00000370544 LINC01547P58512 204 aaPredicted RBP13.65□□□□□ -0.22
LMO4-202ENST00000370544 X6R8D5 127 aa13.63□□□□□ -0.23
LMO4-202ENST00000370544 A6NED7 52 aa13.63□□□□□ -0.23
LMO4-202ENST00000370544 Q6ZVQ6 151 aa13.62□□□□□ -0.23
LMO4-202ENST00000370544 TLN2Q9Y4G6 2542 aa13.62□□□□□ -0.23
LMO4-202ENST00000370544 A0A0U1RQV1 116 aa13.61□□□□□ -0.23
LMO4-202ENST00000370544 MDFIQ99750 246 aa13.61□□□□□ -0.23
LMO4-202ENST00000370544 COL27A1Q8IZC6 1860 aaPredicted RBP13.61□□□□□ -0.23
LMO4-202ENST00000370544 DEFB116Q30KQ4 102 aa13.6□□□□□ -0.23
LMO4-202ENST00000370544 SMCR5Q8TEV8 140 aa13.6□□□□□ -0.23
LMO4-202ENST00000370544 LINC00846Q9NV44 126 aa13.6□□□□□ -0.23
LMO4-202ENST00000370544 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
LMO4-202ENST00000370544 CENPFP49454 3210 aa13.59□□□□□ -0.23
LMO4-202ENST00000370544 IGLV5-45A0A087WSX0 123 aa13.59□□□□□ -0.23
LMO4-202ENST00000370544 H3BNG1 76 aa13.58□□□□□ -0.24
LMO4-202ENST00000370544 C6orf48Q9UBA6 75 aa13.57□□□□□ -0.24
LMO4-202ENST00000370544 ZFYVE26Q68DK2 2539 aa13.57□□□□□ -0.24
LMO4-202ENST00000370544 KRTAP24-1Q3LI83 254 aa13.57□□□□□ -0.24
LMO4-202ENST00000370544 Q9UF83 564 aa13.57□□□□□ -0.24
LMO4-202ENST00000370544 RETNLBQ9BQ08 111 aa13.56□□□□□ -0.24
LMO4-202ENST00000370544 SBSPONQ8IVN8 264 aa13.55□□□□□ -0.24
LMO4-202ENST00000370544 FSHBP01225 129 aa13.55□□□□□ -0.24
LMO4-202ENST00000370544 FN1P02751 2386 aaKnown RBP13.55□□□□□ -0.24
LMO4-202ENST00000370544 SMIM26A0A096LP01 95 aa13.54□□□□□ -0.24
LMO4-202ENST00000370544 KLK9Q2XQG4 91 aa13.53□□□□□ -0.24
LMO4-202ENST00000370544 DOPEY1Q5JWR5 2465 aa13.53□□□□□ -0.24
LMO4-202ENST00000370544 HCG22E2RYF7 251 aa13.53□□□□□ -0.24
LMO4-202ENST00000370544 KIAA0087Q14695 138 aa13.53□□□□□ -0.24
LMO4-202ENST00000370544 LINC00167Q96N53 147 aa13.52□□□□□ -0.24
LMO4-202ENST00000370544 PCSK5Q92824 1860 aa13.52□□□□□ -0.25
LMO4-202ENST00000370544 PCOTHQ58A44 107 aa13.51□□□□□ -0.25
LMO4-202ENST00000370544 ZNF462Q96JM2 2506 aa13.51□□□□□ -0.25
LMO4-202ENST00000370544 USP9YO00507 2555 aaPredicted RBP13.51□□□□□ -0.25
LMO4-202ENST00000370544 H0Y9P7 68 aa13.51□□□□□ -0.25
LMO4-202ENST00000370544 TRBV7-6A0A0J9YX20 115 aa13.5□□□□□ -0.25
LMO4-202ENST00000370544 LIMD2Q9BT23 127 aa13.49□□□□□ -0.25
LMO4-202ENST00000370544 CXCL6P80162 114 aa13.49□□□□□ -0.25
LMO4-202ENST00000370544 TRBV7-7A0A0K0K1E9 115 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms