RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 TMEM254Q8TBM7 123 aa12.39□□□□□ -0.43
CHTOP-201ENST00000368686 H3BQ85 93 aa12.39□□□□□ -0.43
CHTOP-201ENST00000368686 TLN1Q9Y490 2541 aaKnown RBP12.38□□□□□ -0.43
CHTOP-201ENST00000368686 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
CHTOP-201ENST00000368686 LOC100131303A0A0U1RQF7 123 aa12.37□□□□□ -0.43
CHTOP-201ENST00000368686 MSMBP08118 114 aa12.37□□□□□ -0.43
CHTOP-201ENST00000368686 COX17Q14061 63 aa12.37□□□□□ -0.43
CHTOP-201ENST00000368686 DYNLRB2Q8TF09 96 aa12.37□□□□□ -0.43
CHTOP-201ENST00000368686 FAM229BQ4G0N7 80 aa12.35□□□□□ -0.43
CHTOP-201ENST00000368686 STHQ8IWL8 128 aa12.35□□□□□ -0.43
CHTOP-201ENST00000368686 ZNF843Q8N446 348 aa12.35□□□□□ -0.43
CHTOP-201ENST00000368686 MPLKIPQ8TAP9 179 aa12.35□□□□□ -0.43
CHTOP-201ENST00000368686 NOP10Q9NPE3 64 aaKnown RBP12.35□□□□□ -0.43
CHTOP-201ENST00000368686 DEFB136Q30KP8 78 aa12.34□□□□□ -0.43
CHTOP-201ENST00000368686 DEFB112Q30KQ8 113 aa12.34□□□□□ -0.43
CHTOP-201ENST00000368686 BPY2O14599 106 aa12.33□□□□□ -0.44
CHTOP-201ENST00000368686 MUC7Q8TAX7 377 aa12.33□□□□□ -0.44
CHTOP-201ENST00000368686 TRGV2A0A075B6R0 118 aa12.32□□□□□ -0.44
CHTOP-201ENST00000368686 ESRGQ1W209 222 aa12.32□□□□□ -0.44
CHTOP-201ENST00000368686 PIEZO1Q92508 2521 aa12.32□□□□□ -0.44
CHTOP-201ENST00000368686 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
CHTOP-201ENST00000368686 DEFB114Q30KQ6 69 aa12.31□□□□□ -0.44
CHTOP-201ENST00000368686 CREBBPQ92793 2442 aa12.31□□□□□ -0.44
CHTOP-201ENST00000368686 SPTA1P02549 2419 aa12.3□□□□□ -0.44
CHTOP-201ENST00000368686 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
CHTOP-201ENST00000368686 PRYO14603 147 aa12.3□□□□□ -0.44
CHTOP-201ENST00000368686 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
CHTOP-201ENST00000368686 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
CHTOP-201ENST00000368686 SPATA3Q8NHX4 192 aa12.3□□□□□ -0.44
CHTOP-201ENST00000368686 SCXQ7RTU7 201 aa12.29□□□□□ -0.44
CHTOP-201ENST00000368686 GNLYP22749 145 aa12.28□□□□□ -0.44
CHTOP-201ENST00000368686 FUSP35637 526 aaKnown RBP eCLIP12.28□□□□□ -0.442e-8■■■■□ 24.6
CHTOP-201ENST00000368686 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
CHTOP-201ENST00000368686 Q6ZQY7 126 aa12.28□□□□□ -0.44
CHTOP-201ENST00000368686 ZNF702PQ9H963 129 aa12.28□□□□□ -0.44
CHTOP-201ENST00000368686 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.44
CHTOP-201ENST00000368686 C16orf74Q96GX8 76 aa12.27□□□□□ -0.44
CHTOP-201ENST00000368686 RIF1Q5UIP0 2472 aaKnown RBP12.26□□□□□ -0.45
CHTOP-201ENST00000368686 IGHV4-28A0A0C4DH34 117 aa12.26□□□□□ -0.45
CHTOP-201ENST00000368686 PLAC8L1A1L4L8 177 aa12.26□□□□□ -0.45
CHTOP-201ENST00000368686 B4DSR2 109 aa12.26□□□□□ -0.45
CHTOP-201ENST00000368686 IGHV4-30-2A0A087WSY4 118 aa12.25□□□□□ -0.45
CHTOP-201ENST00000368686 KIAA0087Q14695 138 aa12.25□□□□□ -0.45
CHTOP-201ENST00000368686 Q8NDZ9 215 aa12.25□□□□□ -0.45
CHTOP-201ENST00000368686 PLA2G2AP14555 144 aa12.24□□□□□ -0.45
CHTOP-201ENST00000368686 Q6ZTC4 211 aa12.24□□□□□ -0.45
CHTOP-201ENST00000368686 C19orf84I3L1E1 186 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 PRR15Q8IV56 129 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 A0A1B0GUV1 79 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 IGHV4-31P0DP07 118 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 C4orf3Q8WVX3 66 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 OCR1Q9BZK8 76 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 NBASA2RRP1 2371 aa12.23□□□□□ -0.45
CHTOP-201ENST00000368686 ZNF292O60281 2723 aa12.22□□□□□ -0.45
CHTOP-201ENST00000368686 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
CHTOP-201ENST00000368686 IGLV6-57P01721 117 aa12.21□□□□□ -0.45
CHTOP-201ENST00000368686 CCL19Q99731 98 aa12.21□□□□□ -0.45
CHTOP-201ENST00000368686 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.2□□□□□ -0.46
CHTOP-201ENST00000368686 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
CHTOP-201ENST00000368686 IGKV4-1P06312 121 aa12.18□□□□□ -0.46
CHTOP-201ENST00000368686 BBC3Q96PG8 261 aaPredicted RBP12.18□□□□□ -0.46
CHTOP-201ENST00000368686 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
CHTOP-201ENST00000368686 CD164L2Q6UWJ8 174 aa12.18□□□□□ -0.46
CHTOP-201ENST00000368686 COX7BP24311 80 aa12.17□□□□□ -0.46
CHTOP-201ENST00000368686 PMAIP1Q13794 54 aa12.17□□□□□ -0.46
CHTOP-201ENST00000368686 Q6ZRU5 148 aa12.16□□□□□ -0.46
CHTOP-201ENST00000368686 LINC00269Q8N2A0 174 aa12.16□□□□□ -0.46
CHTOP-201ENST00000368686 CCL24O00175 119 aa12.16□□□□□ -0.46
CHTOP-201ENST00000368686 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
CHTOP-201ENST00000368686 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.46
CHTOP-201ENST00000368686 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
CHTOP-201ENST00000368686 hDV103S1A0JD37 113 aa12.14□□□□□ -0.47
CHTOP-201ENST00000368686 HIGD2AQ9BW72 106 aa12.14□□□□□ -0.47
CHTOP-201ENST00000368686 Q6YL49 198 aa12.13□□□□□ -0.47
CHTOP-201ENST00000368686 Q1T7F1 81 aa12.13□□□□□ -0.47
CHTOP-201ENST00000368686 Q8N9L7 120 aa12.13□□□□□ -0.47
CHTOP-201ENST00000368686 SPTBN4Q9H254 2564 aa12.12□□□□□ -0.47
CHTOP-201ENST00000368686 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
CHTOP-201ENST00000368686 CHCHD10Q8WYQ3 142 aaPredicted RBP12.12□□□□□ -0.47
CHTOP-201ENST00000368686 HIVEP3Q5T1R4 2406 aa12.11□□□□□ -0.47
CHTOP-201ENST00000368686 CRYBG3Q68DQ2 2970 aa12.1□□□□□ -0.47
CHTOP-201ENST00000368686 LINC01356Q8N9X3 169 aa12.1□□□□□ -0.47
CHTOP-201ENST00000368686 LINC01006Q8NI28 216 aa12.1□□□□□ -0.47
CHTOP-201ENST00000368686 GYPEP15421 78 aa12.09□□□□□ -0.47
CHTOP-201ENST00000368686 NOTCH3Q9UM47 2321 aa12.08□□□□□ -0.48
CHTOP-201ENST00000368686 CMC4P56277 68 aaPredicted RBP12.08□□□□□ -0.48
CHTOP-201ENST00000368686 ZNF73O43830 326 aaPredicted RBP12.07□□□□□ -0.48
CHTOP-201ENST00000368686 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
CHTOP-201ENST00000368686 DSCR9P59020 149 aa12.07□□□□□ -0.48
CHTOP-201ENST00000368686 A0A0J9YWU9 116 aa12.06□□□□□ -0.48
CHTOP-201ENST00000368686 IGHV4-30-4P0DP06 118 aa12.06□□□□□ -0.48
CHTOP-201ENST00000368686 DAD1P61803 113 aa12.06□□□□□ -0.48
CHTOP-201ENST00000368686 Q6ZRP5 223 aa12.06□□□□□ -0.48
CHTOP-201ENST00000368686 UNQ6190/PRO20217Q6UXQ8 127 aa12.06□□□□□ -0.48
CHTOP-201ENST00000368686 CSNK1G2-AS1Q8NCQ2 148 aa12.06□□□□□ -0.48
CHTOP-201ENST00000368686 PRB1P04280 392 aa12.05□□□□□ -0.48
CHTOP-201ENST00000368686 C10orf25Q5T742 122 aa12.05□□□□□ -0.48
CHTOP-201ENST00000368686 IGLV10-54A0A075B6I4 117 aa12.04□□□□□ -0.48
CHTOP-201ENST00000368686 LCE6AA0A183 80 aa12.04□□□□□ -0.48
CHTOP-201ENST00000368686 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms