RNA–Protein interactions for RNA: ENST00000368547.3

ECHS1-201, Transcript of enoyl-CoA hydratase, short chain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHS1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1-201ENST00000368547 USP17L23D6RBM5 183 aa19.48■□□□□ 0.71
ECHS1-201ENST00000368547 LINC00336Q6ZUF6 198 aa19.48■□□□□ 0.71
ECHS1-201ENST00000368547 COX7B2Q8TF08 81 aa19.48■□□□□ 0.71
ECHS1-201ENST00000368547 A0A087WTM6 91 aa19.47■□□□□ 0.71
ECHS1-201ENST00000368547 MALP21145 153 aa19.47■□□□□ 0.71
ECHS1-201ENST00000368547 HSD52Q0P140 79 aa19.46■□□□□ 0.71
ECHS1-201ENST00000368547 M0R143 59 aa19.44■□□□□ 0.7
ECHS1-201ENST00000368547 TAL2Q16559 108 aa19.44■□□□□ 0.7
ECHS1-201ENST00000368547 SFTA2Q6UW10 78 aa19.44■□□□□ 0.7
ECHS1-201ENST00000368547 C15orf56Q8N910 161 aa19.44■□□□□ 0.7
ECHS1-201ENST00000368547 ZNF625Q96I27 306 aaPredicted RBP19.44■□□□□ 0.7
ECHS1-201ENST00000368547 APOMO95445 188 aa19.43■□□□□ 0.7
ECHS1-201ENST00000368547 Q8IZM0 81 aa19.43■□□□□ 0.7
ECHS1-201ENST00000368547 FAT2Q9NYQ8 4349 aa19.43■□□□□ 0.7
ECHS1-201ENST00000368547 A0A0J9YXY3 114 aa19.43■□□□□ 0.7
ECHS1-201ENST00000368547 CFAP161Q6P656 301 aa19.43■□□□□ 0.7
ECHS1-201ENST00000368547 HERV-K104P63124 156 aa19.42■□□□□ 0.7
ECHS1-201ENST00000368547 SPANXB1Q9NS25 103 aaPredicted RBP19.42■□□□□ 0.7
ECHS1-201ENST00000368547 SNHG12Q9BXW3 62 aa19.4■□□□□ 0.7
ECHS1-201ENST00000368547 TOMM7Q9P0U1 55 aa19.4■□□□□ 0.7
ECHS1-201ENST00000368547 EREGO14944 169 aa19.39■□□□□ 0.69
ECHS1-201ENST00000368547 TIMM17BO60830 172 aa19.39■□□□□ 0.69
ECHS1-201ENST00000368547 Q8N814 137 aa19.39■□□□□ 0.69
ECHS1-201ENST00000368547 PRSS2P07478 247 aa19.38■□□□□ 0.69
ECHS1-201ENST00000368547 HIGD2BQ4VC39 106 aa19.38■□□□□ 0.69
ECHS1-201ENST00000368547 C14orf177Q52M58 125 aa19.38■□□□□ 0.69
ECHS1-201ENST00000368547 ORAOV1Q8WV07 137 aa19.38■□□□□ 0.69
ECHS1-201ENST00000368547 TMEM238C9JI98 176 aa19.37■□□□□ 0.69
ECHS1-201ENST00000368547 HINT1P49773 126 aaPredicted RBP19.37■□□□□ 0.69
ECHS1-201ENST00000368547 C6orf226Q5I0X4 101 aa19.37■□□□□ 0.69
ECHS1-201ENST00000368547 BVES-AS1Q5T3Y7 98 aa19.37■□□□□ 0.69
ECHS1-201ENST00000368547 HIST1H4GQ99525 98 aa19.36■□□□□ 0.69
ECHS1-201ENST00000368547 GVQW2A0A096LPI5 108 aaPredicted RBP19.36■□□□□ 0.69
ECHS1-201ENST00000368547 CXCL5P42830 114 aa19.36■□□□□ 0.69
ECHS1-201ENST00000368547 KIAA0087Q14695 138 aa19.36■□□□□ 0.69
ECHS1-201ENST00000368547 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.33■□□□□ 0.69
ECHS1-201ENST00000368547 LBHQ53QV2 105 aaPredicted RBP19.33■□□□□ 0.69
ECHS1-201ENST00000368547 LINC00526Q96FQ7 95 aa19.33■□□□□ 0.69
ECHS1-201ENST00000368547 LITAFQ99732 161 aa19.33■□□□□ 0.69
ECHS1-201ENST00000368547 SRSF9Q13242 221 aaKnown RBP eCLIP19.33■□□□□ 0.68
ECHS1-201ENST00000368547 CEND1Q8N111 149 aa19.33■□□□□ 0.68
ECHS1-201ENST00000368547 CIRBPQ14011 172 aaKnown RBP19.32■□□□□ 0.68
ECHS1-201ENST00000368547 Q6ZVH6 145 aa19.32■□□□□ 0.68
ECHS1-201ENST00000368547 ZNF561-AS1K7EIQ3 104 aa19.31■□□□□ 0.68
ECHS1-201ENST00000368547 SPAG11BQ08648 103 aa19.31■□□□□ 0.68
ECHS1-201ENST00000368547 SPANXDQ9BXN6 97 aa19.3■□□□□ 0.68
ECHS1-201ENST00000368547 SPANXCQ9NY87 97 aa19.3■□□□□ 0.68
ECHS1-201ENST00000368547 PKD1P98161 4303 aa19.3■□□□□ 0.68
ECHS1-201ENST00000368547 BATFQ16520 125 aa19.29■□□□□ 0.68
ECHS1-201ENST00000368547 CKS1BP61024 79 aa19.29■□□□□ 0.68
ECHS1-201ENST00000368547 A0A1B0GVY2 172 aa19.28■□□□□ 0.68
ECHS1-201ENST00000368547 GCSHP23434 173 aa19.28■□□□□ 0.68
ECHS1-201ENST00000368547 DNAH11Q96DT5 4516 aa19.27■□□□□ 0.68
ECHS1-201ENST00000368547 FUSP35637 526 aaKnown RBP eCLIP19.27■□□□□ 0.68
ECHS1-201ENST00000368547 KRTAP10-2P60368 255 aa19.26■□□□□ 0.67
ECHS1-201ENST00000368547 MEIG1Q5JSS6 88 aa19.25■□□□□ 0.67
ECHS1-201ENST00000368547 SLPIP03973 132 aa19.25■□□□□ 0.67
ECHS1-201ENST00000368547 ADAMTSL4-AS1Q5T5F5 129 aa19.24■□□□□ 0.67
ECHS1-201ENST00000368547 NTN5Q8WTR8 489 aaPredicted RBP19.24■□□□□ 0.67
ECHS1-201ENST00000368547 F8WDY8 70 aa19.22■□□□□ 0.67
ECHS1-201ENST00000368547 FXYD2P54710 66 aa19.22■□□□□ 0.67
ECHS1-201ENST00000368547 COL5A1-AS1Q5SY13 56 aa19.22■□□□□ 0.67
ECHS1-201ENST00000368547 C2orf48Q96LS8 159 aa19.22■□□□□ 0.67
ECHS1-201ENST00000368547 IFITM1P13164 125 aa19.22■□□□□ 0.67
ECHS1-201ENST00000368547 C2orf82Q6UX34 121 aa19.22■□□□□ 0.67
ECHS1-201ENST00000368547 A6NDN8 102 aa19.21■□□□□ 0.67
ECHS1-201ENST00000368547 PTTG1IPP53801 180 aa19.21■□□□□ 0.67
ECHS1-201ENST00000368547 CNBPP62633 177 aaKnown RBP19.21■□□□□ 0.67
ECHS1-201ENST00000368547 CAMK2N2Q96S95 79 aa19.21■□□□□ 0.67
ECHS1-201ENST00000368547 IGLV5-52A0A0A0MRZ9 124 aa19.2■□□□□ 0.66
ECHS1-201ENST00000368547 TMEM238LA0A1B0GVL6 79 aa19.2■□□□□ 0.66
ECHS1-201ENST00000368547 A6NJY4 79 aa19.2■□□□□ 0.66
ECHS1-201ENST00000368547 PPDPFQ9H3Y8 114 aa19.2■□□□□ 0.66
ECHS1-201ENST00000368547 PGPEP1Q9NXJ5 209 aa19.2■□□□□ 0.66
ECHS1-201ENST00000368547 HECTD4Q9Y4D8 3996 aa19.19■□□□□ 0.66
ECHS1-201ENST00000368547 SMIM13P0DJ93 91 aa19.19■□□□□ 0.66
ECHS1-201ENST00000368547 COPS9Q8WXC6 57 aa19.19■□□□□ 0.66
ECHS1-201ENST00000368547 ERG28Q9UKR5 140 aa19.19■□□□□ 0.66
ECHS1-201ENST00000368547 SYCNQ0VAF6 134 aa19.18■□□□□ 0.66
ECHS1-201ENST00000368547 COX17Q14061 63 aa19.18■□□□□ 0.66
ECHS1-201ENST00000368547 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.17■□□□□ 0.66
ECHS1-201ENST00000368547 RPL24P83731 157 aaKnown RBP19.17■□□□□ 0.66
ECHS1-201ENST00000368547 Q6ZRU5 148 aa19.17■□□□□ 0.66
ECHS1-201ENST00000368547 MUSTN1Q8IVN3 82 aa19.16■□□□□ 0.66
ECHS1-201ENST00000368547 CARD19Q96LW7 228 aa19.16■□□□□ 0.66
ECHS1-201ENST00000368547 C10orf25Q5T742 122 aa19.15■□□□□ 0.66
ECHS1-201ENST00000368547 UNQ6190/PRO20217Q6UXQ8 127 aa19.15■□□□□ 0.66
ECHS1-201ENST00000368547 LINC00158P58513 81 aa19.13■□□□□ 0.65
ECHS1-201ENST00000368547 LINC01620Q4KN68 170 aa19.13■□□□□ 0.65
ECHS1-201ENST00000368547 A0A1B0GWB2 263 aa19.12■□□□□ 0.65
ECHS1-201ENST00000368547 DAND5Q8N907 189 aa19.12■□□□□ 0.65
ECHS1-201ENST00000368547 C9orf163Q8N9P6 203 aa19.12■□□□□ 0.65
ECHS1-201ENST00000368547 LINC00308Q8TCZ7 52 aa19.12■□□□□ 0.65
ECHS1-201ENST00000368547 TRBV30A0A0K0K1B3 111 aa19.11■□□□□ 0.65
ECHS1-201ENST00000368547 A0A0U1RRA0 63 aa19.11■□□□□ 0.65
ECHS1-201ENST00000368547 MIR7-3HGQ8N6C7 128 aa19.11■□□□□ 0.65
ECHS1-201ENST00000368547 EPPK1P58107 5090 aaKnown RBP19.1■□□□□ 0.65
ECHS1-201ENST00000368547 NHP2Q9NX24 153 aaKnown RBP19.1■□□□□ 0.65
ECHS1-201ENST00000368547 PFN2P35080 140 aa19.09■□□□□ 0.65
ECHS1-201ENST00000368547 C6orf48Q9UBA6 75 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms