RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MED9Q9NWA0 146 aa8.06□□□□□ -1.12
VAMP4-202ENST00000367740 ARPC5O15511 151 aa8.05□□□□□ -1.12
VAMP4-202ENST00000367740 PDE6DO43924 150 aa8.05□□□□□ -1.12
VAMP4-202ENST00000367740 PLEKHB2Q96CS7 222 aa8.05□□□□□ -1.12
VAMP4-202ENST00000367740 CKS1BP61024 79 aa8.04□□□□□ -1.12
VAMP4-202ENST00000367740 IGLV8-61A0A075B6I0 122 aa8.03□□□□□ -1.12
VAMP4-202ENST00000367740 LINC01561Q8N1V8 128 aa8.03□□□□□ -1.12
VAMP4-202ENST00000367740 Q8NBF4 154 aa8.03□□□□□ -1.12
VAMP4-202ENST00000367740 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
VAMP4-202ENST00000367740 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
VAMP4-202ENST00000367740 TOMM7Q9P0U1 55 aa8.03□□□□□ -1.12
VAMP4-202ENST00000367740 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 A8MWL6 223 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 PPP1R2P9O14990 202 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 PPP1R17O96001 155 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 PRSS2P07478 247 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 PCOTHQ58A44 107 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 BORCS7Q96B45 105 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
VAMP4-202ENST00000367740 A0A1B0GUT8 65 aa8.01□□□□□ -1.13
VAMP4-202ENST00000367740 GATCO43716 136 aaKnown RBP8.01□□□□□ -1.13
VAMP4-202ENST00000367740 FAM19A1Q7Z5A9 133 aa8.01□□□□□ -1.13
VAMP4-202ENST00000367740 SPINK1P00995 79 aa8□□□□□ -1.13
VAMP4-202ENST00000367740 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
VAMP4-202ENST00000367740 Q8IZM0 81 aa8□□□□□ -1.13
VAMP4-202ENST00000367740 SCO1O75880 301 aa7.99□□□□□ -1.13
VAMP4-202ENST00000367740 HIGD1CA8MV81 97 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 F8VRH5 84 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 KRTAP19-4Q3LI73 84 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 CT83Q5H943 113 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 Q6ZN92 141 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 Q8N377 158 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 SPRR4Q96PI1 79 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
VAMP4-202ENST00000367740 IGLV4-3A0A075B6K6 122 aa7.97□□□□□ -1.13
VAMP4-202ENST00000367740 TMEM238C9JI98 176 aa7.97□□□□□ -1.13
VAMP4-202ENST00000367740 TCAPO15273 167 aa7.97□□□□□ -1.13
VAMP4-202ENST00000367740 FAM19A2Q8N3H0 131 aa7.97□□□□□ -1.13
VAMP4-202ENST00000367740 ALKBH7Q9BT30 221 aaPredicted RBP7.97□□□□□ -1.13
VAMP4-202ENST00000367740 NDUFA13Q9P0J0 144 aa7.97□□□□□ -1.13
VAMP4-202ENST00000367740 KRTAP4-16G5E9R7 235 aaPredicted RBP7.96□□□□□ -1.14
VAMP4-202ENST00000367740 S100A1P23297 94 aa7.96□□□□□ -1.14
VAMP4-202ENST00000367740 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
VAMP4-202ENST00000367740 C20orf78Q9BR46 151 aa7.96□□□□□ -1.14
VAMP4-202ENST00000367740 H3BS24 57 aa7.95□□□□□ -1.14
VAMP4-202ENST00000367740 IFI27P40305 119 aaPredicted RBP7.95□□□□□ -1.14
VAMP4-202ENST00000367740 MRPL51Q4U2R6 128 aaKnown RBP7.95□□□□□ -1.14
VAMP4-202ENST00000367740 SMIM2Q9BVW6 85 aa7.95□□□□□ -1.14
VAMP4-202ENST00000367740 GNB1LQ9BYB4 327 aa7.95□□□□□ -1.14
VAMP4-202ENST00000367740 TRBV24-1A0A075B6N3 115 aa7.94□□□□□ -1.14
VAMP4-202ENST00000367740 ZNF345Q14585 488 aa7.94□□□□□ -1.14
VAMP4-202ENST00000367740 TMEM141Q96I45 108 aa7.94□□□□□ -1.14
VAMP4-202ENST00000367740 HIGD2AQ9BW72 106 aa7.94□□□□□ -1.14
VAMP4-202ENST00000367740 M0R378 163 aa7.93□□□□□ -1.14
VAMP4-202ENST00000367740 PYGO1Q9Y3Y4 419 aa7.93□□□□□ -1.14
VAMP4-202ENST00000367740 RPS29P62273 56 aaKnown RBP7.92□□□□□ -1.14
VAMP4-202ENST00000367740 ZC2HC1BQ5TFG8 222 aa7.92□□□□□ -1.14
VAMP4-202ENST00000367740 COX6B2Q6YFQ2 88 aa7.92□□□□□ -1.14
VAMP4-202ENST00000367740 TEX43Q6ZNM6 134 aa7.92□□□□□ -1.14
VAMP4-202ENST00000367740 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
VAMP4-202ENST00000367740 TEX46H3BTG2 121 aa7.91□□□□□ -1.14
VAMP4-202ENST00000367740 FAM104BQ5XKR9 115 aa7.91□□□□□ -1.14
VAMP4-202ENST00000367740 EIF5A2Q9GZV4 153 aaKnown RBP7.91□□□□□ -1.14
VAMP4-202ENST00000367740 LINC00862A6NCI5 91 aa7.9□□□□□ -1.14
VAMP4-202ENST00000367740 SMLR1H3BR10 107 aa7.9□□□□□ -1.14
VAMP4-202ENST00000367740 SLC25A20O43772 301 aa7.9□□□□□ -1.14
VAMP4-202ENST00000367740 CXCL5P42830 114 aa7.9□□□□□ -1.14
VAMP4-202ENST00000367740 RIGQ13278 110 aa7.9□□□□□ -1.14
VAMP4-202ENST00000367740 C2orf88Q9BSF0 95 aa7.89□□□□□ -1.15
VAMP4-202ENST00000367740 CKS2P33552 79 aa7.88□□□□□ -1.15
VAMP4-202ENST00000367740 NDUFA5Q16718 116 aa7.88□□□□□ -1.15
VAMP4-202ENST00000367740 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
VAMP4-202ENST00000367740 KANTRA0A1W2PQU2 76 aa7.87□□□□□ -1.15
VAMP4-202ENST00000367740 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
VAMP4-202ENST00000367740 CDKN2A-AS1Q9UH64 79 aa7.87□□□□□ -1.15
VAMP4-202ENST00000367740 NPYP01303 97 aa7.86□□□□□ -1.15
VAMP4-202ENST00000367740 VPREB1P12018 145 aa7.86□□□□□ -1.15
VAMP4-202ENST00000367740 RAB5BP61020 215 aa7.86□□□□□ -1.15
VAMP4-202ENST00000367740 SVIPQ8NHG7 77 aa7.86□□□□□ -1.15
VAMP4-202ENST00000367740 AMELXQ99217 191 aa7.86□□□□□ -1.15
VAMP4-202ENST00000367740 D6R8Y8 96 aa7.85□□□□□ -1.15
VAMP4-202ENST00000367740 CFC1P0CG37 223 aa7.85□□□□□ -1.15
VAMP4-202ENST00000367740 TAGLN2P37802 199 aaKnown RBP7.84□□□□□ -1.15
VAMP4-202ENST00000367740 C2orf66Q6UXQ4 117 aa7.84□□□□□ -1.15
VAMP4-202ENST00000367740 GEMIN7Q9H840 131 aaKnown RBP7.83□□□□□ -1.16
VAMP4-202ENST00000367740 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
VAMP4-202ENST00000367740 RAB5AP20339 215 aa7.82□□□□□ -1.16
VAMP4-202ENST00000367740 HERVK_113P63121 156 aa7.82□□□□□ -1.16
VAMP4-202ENST00000367740 MOBPQ13875 183 aa7.82□□□□□ -1.16
VAMP4-202ENST00000367740 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 HMSDA8MTL9 139 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 TMEM250H0YL14 139 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 LINC01551Q86U37 167 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 Q8NDZ9 215 aa7.81□□□□□ -1.16
VAMP4-202ENST00000367740 COX7B2Q8TF08 81 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms