RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TMEM243Q9BU79 118 aa10.36□□□□□ -0.75
PRKN-204ENST00000366896 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
PRKN-204ENST00000366896 NOP10Q9NPE3 64 aaKnown RBP10.36□□□□□ -0.75
PRKN-204ENST00000366896 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
PRKN-204ENST00000366896 ATOX1O00244 68 aa10.35□□□□□ -0.75
PRKN-204ENST00000366896 LINC00482Q8N8I6 264 aa10.35□□□□□ -0.75
PRKN-204ENST00000366896 KLK5Q9Y337 293 aaPredicted RBP10.35□□□□□ -0.75
PRKN-204ENST00000366896 A0A1B0GX51 115 aa10.35□□□□□ -0.75
PRKN-204ENST00000366896 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
PRKN-204ENST00000366896 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
PRKN-204ENST00000366896 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
PRKN-204ENST00000366896 PLAC8L1A1L4L8 177 aa10.34□□□□□ -0.75
PRKN-204ENST00000366896 LOC107984640A0A0U1RRK4 108 aa10.33□□□□□ -0.76
PRKN-204ENST00000366896 CRPP02741 224 aa10.33□□□□□ -0.76
PRKN-204ENST00000366896 J3KT08 172 aa10.33□□□□□ -0.76
PRKN-204ENST00000366896 UBE2L6O14933 153 aa10.33□□□□□ -0.76
PRKN-204ENST00000366896 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
PRKN-204ENST00000366896 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
PRKN-204ENST00000366896 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
PRKN-204ENST00000366896 SPATA3Q8NHX4 192 aa10.32□□□□□ -0.76
PRKN-204ENST00000366896 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
PRKN-204ENST00000366896 DNAL4O96015 105 aa10.31□□□□□ -0.76
PRKN-204ENST00000366896 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
PRKN-204ENST00000366896 MDFIQ99750 246 aa10.31□□□□□ -0.76
PRKN-204ENST00000366896 STAB1Q9NY15 2570 aa10.31□□□□□ -0.76
PRKN-204ENST00000366896 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
PRKN-204ENST00000366896 A0A087WYN8 130 aa10.3□□□□□ -0.76
PRKN-204ENST00000366896 RPL18AQ02543 176 aaKnown RBP10.3□□□□□ -0.76
PRKN-204ENST00000366896 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
PRKN-204ENST00000366896 OBSCN-AS1Q96MR7 158 aa10.3□□□□□ -0.76
PRKN-204ENST00000366896 SND1-IT1Q9HBX3 110 aa10.3□□□□□ -0.76
PRKN-204ENST00000366896 C19orf73Q9NVV2 129 aa10.3□□□□□ -0.76
PRKN-204ENST00000366896 TRGV2A0A075B6R0 118 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 Q6JHZ5 121 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 CSNK1G2-AS1Q8NCQ2 148 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 IGLV1-51P01701 117 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 RPS28P62857 69 aaKnown RBP10.29□□□□□ -0.76
PRKN-204ENST00000366896 SMIM11BQ8TCY0 68 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 C14orf132Q9NPU4 83 aa10.29□□□□□ -0.76
PRKN-204ENST00000366896 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
PRKN-204ENST00000366896 COX7B2Q8TF08 81 aa10.28□□□□□ -0.76
PRKN-204ENST00000366896 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 H0YGX0 51 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 TRRAPQ9Y4A5 3859 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 VWFP04275 2813 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 FAM19A5Q7Z5A7 132 aaPredicted RBP10.27□□□□□ -0.77
PRKN-204ENST00000366896 CYSTM1Q9H1C7 97 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 LINC00846Q9NV44 126 aa10.27□□□□□ -0.77
PRKN-204ENST00000366896 TRBV6-8A0A0A6YYG3 113 aa10.26□□□□□ -0.77
PRKN-204ENST00000366896 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
PRKN-204ENST00000366896 ANK2Q01484 3957 aa10.25□□□□□ -0.77
PRKN-204ENST00000366896 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
PRKN-204ENST00000366896 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
PRKN-204ENST00000366896 FHL2Q14192 279 aa10.25□□□□□ -0.77
PRKN-204ENST00000366896 SERP2Q8N6R1 65 aa10.25□□□□□ -0.77
PRKN-204ENST00000366896 TRGV4A0A0C4DH28 118 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 CCL18P55774 89 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 C9orf66Q5T8R8 295 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 A0A087WZ39 114 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 IBA57-AS1B1ANH7 110 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
PRKN-204ENST00000366896 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
PRKN-204ENST00000366896 LECT2O14960 151 aa10.23□□□□□ -0.77
PRKN-204ENST00000366896 LINC00158P58513 81 aa10.23□□□□□ -0.77
PRKN-204ENST00000366896 TMEM258P61165 79 aa10.23□□□□□ -0.77
PRKN-204ENST00000366896 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
PRKN-204ENST00000366896 A0A087WVE0 104 aa10.22□□□□□ -0.77
PRKN-204ENST00000366896 KIR2DL5BQ8NHK3 375 aa10.22□□□□□ -0.77
PRKN-204ENST00000366896 NCR3O14931 201 aa10.21□□□□□ -0.77
PRKN-204ENST00000366896 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
PRKN-204ENST00000366896 CMYA5Q8N3K9 4069 aa10.21□□□□□ -0.78
PRKN-204ENST00000366896 USP17L23D6RBM5 183 aa10.2□□□□□ -0.78
PRKN-204ENST00000366896 DPH3Q96FX2 82 aa10.2□□□□□ -0.78
PRKN-204ENST00000366896 WIPF1O43516 503 aa10.19□□□□□ -0.78
PRKN-204ENST00000366896 SS18Q15532 418 aa10.18□□□□□ -0.78
PRKN-204ENST00000366896 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
PRKN-204ENST00000366896 A0A1B0GUV1 79 aa10.17□□□□□ -0.78
PRKN-204ENST00000366896 LINC00959A0A1B0GUT2 108 aa10.17□□□□□ -0.78
PRKN-204ENST00000366896 SLPIP03973 132 aa10.17□□□□□ -0.78
PRKN-204ENST00000366896 ORMDL1Q9P0S3 153 aa10.17□□□□□ -0.78
PRKN-204ENST00000366896 CCKP06307 115 aa10.16□□□□□ -0.78
PRKN-204ENST00000366896 DEFB130BP0DP73 79 aa10.16□□□□□ -0.78
PRKN-204ENST00000366896 DEFB130AP0DP74 79 aa10.16□□□□□ -0.78
PRKN-204ENST00000366896 PAX4O43316 350 aa10.16□□□□□ -0.78
PRKN-204ENST00000366896 PFN2P35080 140 aa10.16□□□□□ -0.78
PRKN-204ENST00000366896 KRTAP21-3Q3LHN1 58 aa10.16□□□□□ -0.78
PRKN-204ENST00000366896 OXLD1Q5BKU9 147 aa10.15□□□□□ -0.78
PRKN-204ENST00000366896 C11orf68Q9H3H3 251 aaKnown RBP10.15□□□□□ -0.78
PRKN-204ENST00000366896 LINC00167Q96N53 147 aa10.14□□□□□ -0.79
PRKN-204ENST00000366896 Q8IZM0 81 aa10.13□□□□□ -0.79
PRKN-204ENST00000366896 S100A7L2Q5SY68 101 aa10.13□□□□□ -0.79
PRKN-204ENST00000366896 OXTP01178 125 aa10.12□□□□□ -0.79
PRKN-204ENST00000366896 DSCR8Q96T75 97 aa10.12□□□□□ -0.79
PRKN-204ENST00000366896 ATP5EP2Q5VTU8 51 aa10.12□□□□□ -0.79
PRKN-204ENST00000366896 JMJD7-PLA2G4BH0Y9G9 81 aa10.11□□□□□ -0.79
PRKN-204ENST00000366896 GYPEP15421 78 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms