RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TMEM126AQ9H061 195 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 NAT8BQ9UHF3 227 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 EPDR1Q9UM22 224 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 ARL2-SNX15V9GYD0 113 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 TMSB15BA0A087X1C1 80 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 GVQW2A0A096LPI5 108 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 FABP5P3A8MUU1 101 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 SH2D1AO60880 128 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 C3orf79P0CE67 100 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 FABP2P12104 132 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 AMTP48728 403 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 BOD1L2Q8IYS8 172 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 TMEM191AQ9H0A3 160 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 PHLDA3Q9Y5J5 127 aa5.06□□□□□ -1.6
HMGB1P39-201ENST00000366304 TRBV25-1A0A075B6N4 114 aa5.05□□□□□ -1.6
HMGB1P39-201ENST00000366304 A0A1B0GV50 99 aa5.05□□□□□ -1.6
HMGB1P39-201ENST00000366304 NUPR1O60356 82 aa5.05□□□□□ -1.6
HMGB1P39-201ENST00000366304 ZNF56Q15929 161 aa5.05□□□□□ -1.6
HMGB1P39-201ENST00000366304 C1orf137Q5JT78 98 aa5.05□□□□□ -1.6
HMGB1P39-201ENST00000366304 OR10AG1Q8NH19 301 aa5.05□□□□□ -1.6
HMGB1P39-201ENST00000366304 MUC21A0A140T8X8 626 aa5.04□□□□□ -1.6
HMGB1P39-201ENST00000366304 A0A1B0GUV1 79 aa5.04□□□□□ -1.6
HMGB1P39-201ENST00000366304 PAGE4O60829 102 aa5.04□□□□□ -1.6
HMGB1P39-201ENST00000366304 RPL32P62910 135 aaKnown RBP5.04□□□□□ -1.6
HMGB1P39-201ENST00000366304 Q86TA4 180 aa5.04□□□□□ -1.6
HMGB1P39-201ENST00000366304 LINC00474Q9P2X8 69 aa5.04□□□□□ -1.6
HMGB1P39-201ENST00000366304 IGLV1-50A0A075B6I6 118 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 IGHV1-24A0A0C4DH33 117 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 H0Y9J4 135 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 PEX7O00628 323 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 UBE2G1P62253 170 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 FOXI1Q12951 378 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 DIRC1Q969H9 104 aa5.03□□□□□ -1.6
HMGB1P39-201ENST00000366304 IGKV3OR2-268A0A0C4DH90 116 aa5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 A4D1N5 150 aa5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 COX8CQ7Z4L0 72 aa5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 CHCHD10Q8WYQ3 142 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 ANAPC13Q9BS18 74 aa5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
HMGB1P39-201ENST00000366304 HSBP1O75506 76 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 SMIM13P0DJ93 91 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 GAGE2BQ13066 116 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 Q6Q795 121 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 FMC1Q96HJ9 113 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 TMEM243Q9BU79 118 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 KRTAP4-1Q9BYQ7 146 aa5.01□□□□□ -1.61
HMGB1P39-201ENST00000366304 F5H697 171 aa5□□□□□ -1.61
HMGB1P39-201ENST00000366304 M0QY20 66 aa5□□□□□ -1.61
HMGB1P39-201ENST00000366304 SPINK8P0C7L1 97 aa5□□□□□ -1.61
HMGB1P39-201ENST00000366304 COX8AP10176 69 aa5□□□□□ -1.61
HMGB1P39-201ENST00000366304 C9orf116Q5BN46 136 aaPredicted RBP5□□□□□ -1.61
HMGB1P39-201ENST00000366304 Q6ZVH6 145 aa5□□□□□ -1.61
HMGB1P39-201ENST00000366304 TSKUQ8WUA8 353 aa5□□□□□ -1.61
HMGB1P39-201ENST00000366304 F8WDY8 70 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 LTAP01374 205 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 SMIM20Q8N5G0 67 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 C11orf52Q96A22 123 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 OSTCQ9NRP0 149 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 SS18L2Q9UHA2 77 aa4.99□□□□□ -1.61
HMGB1P39-201ENST00000366304 H3BUT2 72 aa4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 APCSP02743 223 aa4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 RPS28P62857 69 aaKnown RBP4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 SUMO4Q6EEV6 95 aa4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 MAP1LC3CQ9BXW4 147 aa4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 MAP1LC3AQ9H492 121 aa4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 SPANXB1Q9NS25 103 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P39-201ENST00000366304 FAM168BA1KXE4 195 aa4.97□□□□□ -1.61
HMGB1P39-201ENST00000366304 SNAI2O43623 268 aa4.97□□□□□ -1.61
HMGB1P39-201ENST00000366304 SYCNQ0VAF6 134 aa4.97□□□□□ -1.61
HMGB1P39-201ENST00000366304 TMEM136Q6ZRR5 245 aa4.97□□□□□ -1.61
HMGB1P39-201ENST00000366304 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
HMGB1P39-201ENST00000366304 OR13C6PQ8NH95 151 aa4.97□□□□□ -1.61
HMGB1P39-201ENST00000366304 LOC107984640A0A0U1RRK4 108 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 H3BMG7 143 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 SYS1-DBNDD2H3BUS1 97 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 XCL1P47992 114 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 UBE2D1P51668 147 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 TAL2Q16559 108 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 CENPWQ5EE01 88 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
HMGB1P39-201ENST00000366304 A0A087WZ39 114 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 IGHV1-58A0A0C4DH39 117 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 LEPROTL1O95214 131 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 MGPP08493 103 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 NTF3P20783 257 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 RPL13AP40429 203 aaKnown RBP4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 LINC01547P58512 204 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 LYRM7Q5U5X0 104 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 ATP5L2Q7Z4Y8 100 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 NUP35Q8NFH5 326 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 PGLYRP4Q96LB8 373 aa4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 RPP21Q9H633 154 aaKnown RBP4.95□□□□□ -1.62
HMGB1P39-201ENST00000366304 TRBV20OR9-2A0A075B6H5 130 aa4.94□□□□□ -1.62
HMGB1P39-201ENST00000366304 IGLV4-69A0A075B6H9 119 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms