RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GAGE2EQ4V326 116 aa8.32□□□□□ -1.08
TNFRSF1A-202ENST00000366159 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
TNFRSF1A-202ENST00000366159 SEC11CQ9BY50 192 aa8.32□□□□□ -1.08
TNFRSF1A-202ENST00000366159 GAGE2DQ9UEU5 116 aa8.32□□□□□ -1.08
TNFRSF1A-202ENST00000366159 G0S2P27469 103 aa8.31□□□□□ -1.08
TNFRSF1A-202ENST00000366159 HERVK_113P63121 156 aa8.31□□□□□ -1.08
TNFRSF1A-202ENST00000366159 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
TNFRSF1A-202ENST00000366159 Q8IZM0 81 aa8.31□□□□□ -1.08
TNFRSF1A-202ENST00000366159 GNB1LQ9BYB4 327 aa8.31□□□□□ -1.08
TNFRSF1A-202ENST00000366159 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
TNFRSF1A-202ENST00000366159 SEC11AP67812 179 aa8.3□□□□□ -1.08
TNFRSF1A-202ENST00000366159 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
TNFRSF1A-202ENST00000366159 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
TNFRSF1A-202ENST00000366159 ERASQ7Z444 233 aa8.3□□□□□ -1.08
TNFRSF1A-202ENST00000366159 PACRGQ96M98 296 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF1A-202ENST00000366159 ALKBH7Q9BT30 221 aaPredicted RBP8.3□□□□□ -1.08
TNFRSF1A-202ENST00000366159 C6orf226Q5I0X4 101 aa8.29□□□□□ -1.08
TNFRSF1A-202ENST00000366159 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
TNFRSF1A-202ENST00000366159 M0QXV9 152 aa8.28□□□□□ -1.08
TNFRSF1A-202ENST00000366159 PRSS2P07478 247 aa8.28□□□□□ -1.08
TNFRSF1A-202ENST00000366159 DIRC1Q969H9 104 aa8.28□□□□□ -1.08
TNFRSF1A-202ENST00000366159 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
TNFRSF1A-202ENST00000366159 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
TNFRSF1A-202ENST00000366159 H0Y9J4 135 aa8.27□□□□□ -1.09
TNFRSF1A-202ENST00000366159 CKS1BP61024 79 aa8.27□□□□□ -1.09
TNFRSF1A-202ENST00000366159 SCGB3A1Q96QR1 104 aa8.27□□□□□ -1.09
TNFRSF1A-202ENST00000366159 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 F8VRH5 84 aa8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 S100PP25815 95 aa8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 COX19Q49B96 90 aa8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 CARHSP1Q9Y2V2 147 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1A-202ENST00000366159 COMMD7Q86VX2 200 aa8.25□□□□□ -1.09
TNFRSF1A-202ENST00000366159 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
TNFRSF1A-202ENST00000366159 CST9LQ9H4G1 147 aa8.25□□□□□ -1.09
TNFRSF1A-202ENST00000366159 CXCL5P42830 114 aa8.24□□□□□ -1.09
TNFRSF1A-202ENST00000366159 PDZD11Q5EBL8 140 aa8.24□□□□□ -1.09
TNFRSF1A-202ENST00000366159 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
TNFRSF1A-202ENST00000366159 UBE2BP63146 152 aa8.23□□□□□ -1.09
TNFRSF1A-202ENST00000366159 RHEBQ15382 184 aa8.23□□□□□ -1.09
TNFRSF1A-202ENST00000366159 PRR26Q8N8Z3 221 aa8.23□□□□□ -1.09
TNFRSF1A-202ENST00000366159 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
TNFRSF1A-202ENST00000366159 A0A096LNJ9 63 aa8.22□□□□□ -1.09
TNFRSF1A-202ENST00000366159 TP73-AS1Q9UF72 201 aa8.22□□□□□ -1.09
TNFRSF1A-202ENST00000366159 LPAP08519 4548 aa8.22□□□□□ -1.09
TNFRSF1A-202ENST00000366159 FABP9Q0Z7S8 132 aa8.21□□□□□ -1.1
TNFRSF1A-202ENST00000366159 PMVKQ15126 192 aa8.21□□□□□ -1.1
TNFRSF1A-202ENST00000366159 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
TNFRSF1A-202ENST00000366159 URB1-AS1Q96HZ7 61 aa8.21□□□□□ -1.1
TNFRSF1A-202ENST00000366159 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
TNFRSF1A-202ENST00000366159 IGLV1-50A0A075B6I6 118 aa8.2□□□□□ -1.1
TNFRSF1A-202ENST00000366159 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
TNFRSF1A-202ENST00000366159 NUPR1O60356 82 aa8.19□□□□□ -1.1
TNFRSF1A-202ENST00000366159 ZNF861PO60384 105 aa8.19□□□□□ -1.1
TNFRSF1A-202ENST00000366159 LBHQ53QV2 105 aaPredicted RBP8.19□□□□□ -1.1
TNFRSF1A-202ENST00000366159 IGLV5-39A0A0G2JS06 123 aa8.18□□□□□ -1.1
TNFRSF1A-202ENST00000366159 SPINK8P0C7L1 97 aa8.18□□□□□ -1.1
TNFRSF1A-202ENST00000366159 IGLC3P0DOY3 106 aa8.18□□□□□ -1.1
TNFRSF1A-202ENST00000366159 MRPL55Q7Z7F7 128 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-202ENST00000366159 C18orf32Q8TCD1 76 aa8.18□□□□□ -1.1
TNFRSF1A-202ENST00000366159 SMCO4Q9NRQ5 59 aa8.18□□□□□ -1.1
TNFRSF1A-202ENST00000366159 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
TNFRSF1A-202ENST00000366159 LINC00614P0C842 121 aa8.16□□□□□ -1.1
TNFRSF1A-202ENST00000366159 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
TNFRSF1A-202ENST00000366159 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
TNFRSF1A-202ENST00000366159 H3BRM9 83 aa8.14□□□□□ -1.11
TNFRSF1A-202ENST00000366159 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
TNFRSF1A-202ENST00000366159 BCE1O60756 84 aa8.13□□□□□ -1.11
TNFRSF1A-202ENST00000366159 RAB5BP61020 215 aa8.13□□□□□ -1.11
TNFRSF1A-202ENST00000366159 YPEL4Q96NS1 127 aa8.13□□□□□ -1.11
TNFRSF1A-202ENST00000366159 HBDP02042 147 aa8.12□□□□□ -1.11
TNFRSF1A-202ENST00000366159 RPL13AP40429 203 aaKnown RBP8.12□□□□□ -1.11
TNFRSF1A-202ENST00000366159 PMCHL1Q16048 86 aa8.12□□□□□ -1.11
TNFRSF1A-202ENST00000366159 KRTAP13-1Q8IUC0 172 aa8.12□□□□□ -1.11
TNFRSF1A-202ENST00000366159 RPL37AP8A6NKH3 93 aa8.11□□□□□ -1.11
TNFRSF1A-202ENST00000366159 ATP5LO75964 103 aa8.11□□□□□ -1.11
TNFRSF1A-202ENST00000366159 APOC3P02656 99 aa8.11□□□□□ -1.11
TNFRSF1A-202ENST00000366159 RPL28P46779 137 aaKnown RBP8.1□□□□□ -1.11
TNFRSF1A-202ENST00000366159 GAGE10A6NGK3 116 aa8.09□□□□□ -1.11
TNFRSF1A-202ENST00000366159 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
TNFRSF1A-202ENST00000366159 SNAPINO95295 136 aa8.09□□□□□ -1.11
TNFRSF1A-202ENST00000366159 NDUFA6P56556 154 aa8.09□□□□□ -1.11
TNFRSF1A-202ENST00000366159 ANKRD39Q53RE8 183 aa8.09□□□□□ -1.11
TNFRSF1A-202ENST00000366159 SVBPQ8N300 66 aa8.09□□□□□ -1.11
TNFRSF1A-202ENST00000366159 A0A087X002 238 aa8.08□□□□□ -1.12
TNFRSF1A-202ENST00000366159 VPREB1P12018 145 aa8.08□□□□□ -1.12
TNFRSF1A-202ENST00000366159 PFN2P35080 140 aa8.08□□□□□ -1.12
TNFRSF1A-202ENST00000366159 COX17Q14061 63 aa8.08□□□□□ -1.12
TNFRSF1A-202ENST00000366159 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
TNFRSF1A-202ENST00000366159 SCO1O75880 301 aa8.07□□□□□ -1.12
TNFRSF1A-202ENST00000366159 BAGE3Q86Y29 109 aa8.07□□□□□ -1.12
TNFRSF1A-202ENST00000366159 ZNF625Q96I27 306 aaPredicted RBP8.07□□□□□ -1.12
TNFRSF1A-202ENST00000366159 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
TNFRSF1A-202ENST00000366159 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
TNFRSF1A-202ENST00000366159 Q8NDZ9 215 aa8.06□□□□□ -1.12
TNFRSF1A-202ENST00000366159 NDUFA5Q16718 116 aa8.05□□□□□ -1.12
TNFRSF1A-202ENST00000366159 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms