RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 A0A0U1RQV1 116 aa14.42□□□□□ -0.1
CDC42BPB-201ENST00000361246 LST1O00453 97 aa14.42□□□□□ -0.1
CDC42BPB-201ENST00000361246 Q8N9L7 120 aa14.42□□□□□ -0.1
CDC42BPB-201ENST00000361246 NAV2Q8IVL1 2488 aa14.41□□□□□ -0.1
CDC42BPB-201ENST00000361246 C2orf48Q96LS8 159 aa14.41□□□□□ -0.1
CDC42BPB-201ENST00000361246 PRR15LQ9BU68 103 aa14.4□□□□□ -0.1
CDC42BPB-201ENST00000361246 KRTAP24-1Q3LI83 254 aa14.4□□□□□ -0.1
CDC42BPB-201ENST00000361246 A0A087WYN8 130 aa14.39□□□□□ -0.11
CDC42BPB-201ENST00000361246 LINC00337Q8N6G1 96 aa14.39□□□□□ -0.11
CDC42BPB-201ENST00000361246 NHLRC4P0CG21 123 aaPredicted RBP14.39□□□□□ -0.11
CDC42BPB-201ENST00000361246 COL27A1Q8IZC6 1860 aaPredicted RBP14.39□□□□□ -0.11
CDC42BPB-201ENST00000361246 Q6ZRU5 148 aa14.38□□□□□ -0.11
CDC42BPB-201ENST00000361246 PCOTHQ58A44 107 aa14.38□□□□□ -0.11
CDC42BPB-201ENST00000361246 CHTF8P0CG12 524 aa14.38□□□□□ -0.11
CDC42BPB-201ENST00000361246 EGFEM1PQ0D2K5 195 aa14.37□□□□□ -0.11
CDC42BPB-201ENST00000361246 FAM19A3Q7Z5A8 133 aa14.36□□□□□ -0.11
CDC42BPB-201ENST00000361246 SMIM1B2RUZ4 78 aa14.36□□□□□ -0.11
CDC42BPB-201ENST00000361246 PRYO14603 147 aa14.36□□□□□ -0.11
CDC42BPB-201ENST00000361246 SPACA4Q8TDM5 124 aa14.35□□□□□ -0.11
CDC42BPB-201ENST00000361246 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
CDC42BPB-201ENST00000361246 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.34□□□□□ -0.11
CDC42BPB-201ENST00000361246 TIMM17BO60830 172 aa14.34□□□□□ -0.11
CDC42BPB-201ENST00000361246 IGIPA6NJ69 53 aa14.33□□□□□ -0.11
CDC42BPB-201ENST00000361246 NDUFC2-KCTD14E9PQ53 114 aa14.32□□□□□ -0.12
CDC42BPB-201ENST00000361246 LINC01547P58512 204 aaPredicted RBP14.32□□□□□ -0.12
CDC42BPB-201ENST00000361246 MYO18BQ8IUG5 2567 aa14.32□□□□□ -0.12
CDC42BPB-201ENST00000361246 Q8N814 137 aa14.31□□□□□ -0.12
CDC42BPB-201ENST00000361246 A6NED7 52 aa14.3□□□□□ -0.12
CDC42BPB-201ENST00000361246 C16orf90A8MZG2 172 aa14.3□□□□□ -0.12
CDC42BPB-201ENST00000361246 TSPEAR-AS2P59090 65 aa14.3□□□□□ -0.12
CDC42BPB-201ENST00000361246 DOPEY1Q5JWR5 2465 aa14.3□□□□□ -0.12
CDC42BPB-201ENST00000361246 A0A087WSZ3 146 aa14.29□□□□□ -0.12
CDC42BPB-201ENST00000361246 LINC00208Q96KT6 92 aa14.28□□□□□ -0.12
CDC42BPB-201ENST00000361246 ADAMTSL4-AS1Q5T5F5 129 aa14.28□□□□□ -0.12
CDC42BPB-201ENST00000361246 SERP2Q8N6R1 65 aa14.28□□□□□ -0.12
CDC42BPB-201ENST00000361246 C2orf91Q6ZV80 131 aa14.27□□□□□ -0.12
CDC42BPB-201ENST00000361246 C22orf24Q9Y442 160 aa14.26□□□□□ -0.13
CDC42BPB-201ENST00000361246 NTM-AS1Q6ZSK4 140 aa14.26□□□□□ -0.13
CDC42BPB-201ENST00000361246 Q8N3U1 123 aa14.26□□□□□ -0.13
CDC42BPB-201ENST00000361246 PTPRBP23467 1997 aa14.25□□□□□ -0.13
CDC42BPB-201ENST00000361246 FAM229AH3BQW9 127 aa14.24□□□□□ -0.13
CDC42BPB-201ENST00000361246 ATP5EP2Q5VTU8 51 aa14.24□□□□□ -0.13
CDC42BPB-201ENST00000361246 LINC00575Q6W349 94 aa14.24□□□□□ -0.13
CDC42BPB-201ENST00000361246 IGKV2D-30A0A075B6S6 120 aa14.23□□□□□ -0.13
CDC42BPB-201ENST00000361246 IGKV2-30P06310 120 aa14.23□□□□□ -0.13
CDC42BPB-201ENST00000361246 SMCR5Q8TEV8 140 aa14.23□□□□□ -0.13
CDC42BPB-201ENST00000361246 TRBV7-6A0A0J9YX20 115 aa14.22□□□□□ -0.13
CDC42BPB-201ENST00000361246 MOBPQ13875 183 aa14.22□□□□□ -0.13
CDC42BPB-201ENST00000361246 UQCRQO14949 82 aa14.21□□□□□ -0.13
CDC42BPB-201ENST00000361246 ZFYVE26Q68DK2 2539 aa14.2□□□□□ -0.14
CDC42BPB-201ENST00000361246 PHF5AQ7RTV0 110 aaKnown RBP14.2□□□□□ -0.14
CDC42BPB-201ENST00000361246 J3QL48 77 aa14.19□□□□□ -0.14
CDC42BPB-201ENST00000361246 COL4A2P08572 1712 aa14.18□□□□□ -0.14
CDC42BPB-201ENST00000361246 LINC00315P59091 139 aa14.18□□□□□ -0.14
CDC42BPB-201ENST00000361246 A0A087WVE0 104 aa14.17□□□□□ -0.14
CDC42BPB-201ENST00000361246 JMJD1CQ15652 2540 aa14.17□□□□□ -0.14
CDC42BPB-201ENST00000361246 RTL8CO15255 209 aa14.17□□□□□ -0.14
CDC42BPB-201ENST00000361246 HCG22E2RYF7 251 aa14.16□□□□□ -0.14
CDC42BPB-201ENST00000361246 BEAN1Q3B7T3 259 aa14.14□□□□□ -0.15
CDC42BPB-201ENST00000361246 Q9UF83 564 aa14.14□□□□□ -0.15
CDC42BPB-201ENST00000361246 C10orf142B7Z368 130 aa14.14□□□□□ -0.15
CDC42BPB-201ENST00000361246 MUC7Q8TAX7 377 aa14.14□□□□□ -0.15
CDC42BPB-201ENST00000361246 CNFNQ9BYD5 112 aa14.14□□□□□ -0.15
CDC42BPB-201ENST00000361246 LIMD2Q9BT23 127 aa14.13□□□□□ -0.15
CDC42BPB-201ENST00000361246 YPEL4Q96NS1 127 aa14.13□□□□□ -0.15
CDC42BPB-201ENST00000361246 URB1-AS1Q96HZ7 61 aa14.12□□□□□ -0.15
CDC42BPB-201ENST00000361246 FAM240AA0A1B0GVK7 77 aa14.12□□□□□ -0.15
CDC42BPB-201ENST00000361246 SOSTDC1Q6X4U4 206 aa14.11□□□□□ -0.15
CDC42BPB-201ENST00000361246 C2CD3Q4AC94 2353 aa14.11□□□□□ -0.15
CDC42BPB-201ENST00000361246 H0Y9P7 68 aa14.11□□□□□ -0.15
CDC42BPB-201ENST00000361246 A0A1B0GUV1 79 aa14.1□□□□□ -0.15
CDC42BPB-201ENST00000361246 FN1P02751 2386 aaKnown RBP14.1□□□□□ -0.15
CDC42BPB-201ENST00000361246 CCDC179H3BU77 68 aa14.1□□□□□ -0.15
CDC42BPB-201ENST00000361246 C7orf65Q6ZTY9 151 aa14.09□□□□□ -0.15
CDC42BPB-201ENST00000361246 AMELXQ99217 191 aa14.08□□□□□ -0.15
CDC42BPB-201ENST00000361246 KIAA0087Q14695 138 aa14.08□□□□□ -0.16
CDC42BPB-201ENST00000361246 Q6JHZ5 121 aa14.07□□□□□ -0.16
CDC42BPB-201ENST00000361246 TYMSOSQ8TAI1 123 aa14.07□□□□□ -0.16
CDC42BPB-201ENST00000361246 PIEZO1Q92508 2521 aa14.06□□□□□ -0.16
CDC42BPB-201ENST00000361246 LINC00167Q96N53 147 aa14.05□□□□□ -0.16
CDC42BPB-201ENST00000361246 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
CDC42BPB-201ENST00000361246 C11orf72Q8NBR9 251 aa14.05□□□□□ -0.16
CDC42BPB-201ENST00000361246 Q8N2B8 174 aa14.05□□□□□ -0.16
CDC42BPB-201ENST00000361246 PCSK5Q92824 1860 aa14.05□□□□□ -0.16
CDC42BPB-201ENST00000361246 CRYGAP11844 174 aa14.03□□□□□ -0.16
CDC42BPB-201ENST00000361246 CSDC2Q9Y534 153 aaKnown RBP14.02□□□□□ -0.16
CDC42BPB-201ENST00000361246 NBDYA0A0U1RRE5 68 aa14.02□□□□□ -0.17
CDC42BPB-201ENST00000361246 WWC2-AS2Q96NR7 200 aa14.02□□□□□ -0.17
CDC42BPB-201ENST00000361246 LINC00588Q9Y4M8 146 aa14.01□□□□□ -0.17
CDC42BPB-201ENST00000361246 C6orf48Q9UBA6 75 aa14.01□□□□□ -0.17
CDC42BPB-201ENST00000361246 ABCA12Q86UK0 2595 aa14□□□□□ -0.17
CDC42BPB-201ENST00000361246 V9GYY9 64 aa13.98□□□□□ -0.17
CDC42BPB-201ENST00000361246 SMR3BP02814 79 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPB-201ENST00000361246 NDUFC1O43677 76 aa13.98□□□□□ -0.17
CDC42BPB-201ENST00000361246 PLA2G1BP04054 148 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-201ENST00000361246 PSPHP1O15172 72 aa13.97□□□□□ -0.17
CDC42BPB-201ENST00000361246 LINC00310P59036 64 aa13.96□□□□□ -0.17
CDC42BPB-201ENST00000361246 TLN1Q9Y490 2541 aaKnown RBP13.96□□□□□ -0.18
CDC42BPB-201ENST00000361246 RPL37AP61513 92 aaKnown RBP13.95□□□□□ -0.18
CDC42BPB-201ENST00000361246 TLN2Q9Y4G6 2542 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms