RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 X6R8D5 127 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 BRWD1-AS2P59051 145 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 IGLV5-52A0A0A0MRZ9 124 aa9.67□□□□□ -0.86
SRGAP3-201ENST00000360413 USP24Q9UPU5 2620 aa9.66□□□□□ -0.86
SRGAP3-201ENST00000360413 GAS8-AS1O95177 125 aa9.66□□□□□ -0.86
SRGAP3-201ENST00000360413 LINC00337Q8N6G1 96 aa9.65□□□□□ -0.86
SRGAP3-201ENST00000360413 Q6ZSV7 163 aa9.65□□□□□ -0.86
SRGAP3-201ENST00000360413 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.86
SRGAP3-201ENST00000360413 LMO4P61968 165 aa9.65□□□□□ -0.87
SRGAP3-201ENST00000360413 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.87
SRGAP3-201ENST00000360413 LINC00310P59036 64 aa9.65□□□□□ -0.87
SRGAP3-201ENST00000360413 CDIP1Q9H305 208 aa9.65□□□□□ -0.87
SRGAP3-201ENST00000360413 COL27A1Q8IZC6 1860 aaPredicted RBP9.64□□□□□ -0.87
SRGAP3-201ENST00000360413 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
SRGAP3-201ENST00000360413 Q6ZPA2 131 aa9.64□□□□□ -0.87
SRGAP3-201ENST00000360413 LINC00575Q6W349 94 aa9.64□□□□□ -0.87
SRGAP3-201ENST00000360413 CXCL6P80162 114 aa9.63□□□□□ -0.87
SRGAP3-201ENST00000360413 INAFM1C9JVW0 142 aa9.63□□□□□ -0.87
SRGAP3-201ENST00000360413 POLR2KP53803 58 aaKnown RBP9.62□□□□□ -0.87
SRGAP3-201ENST00000360413 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
SRGAP3-201ENST00000360413 BBC3Q96PG8 261 aaPredicted RBP9.62□□□□□ -0.87
SRGAP3-201ENST00000360413 IGIPA6NJ69 53 aa9.62□□□□□ -0.87
SRGAP3-201ENST00000360413 PLA2G2AP14555 144 aa9.61□□□□□ -0.87
SRGAP3-201ENST00000360413 IGLV2-18A0A075B6J9 118 aa9.61□□□□□ -0.87
SRGAP3-201ENST00000360413 A0A1B0GW54 56 aa9.61□□□□□ -0.87
SRGAP3-201ENST00000360413 SPINK1P00995 79 aa9.61□□□□□ -0.87
SRGAP3-201ENST00000360413 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
SRGAP3-201ENST00000360413 Q8N2B8 174 aa9.6□□□□□ -0.87
SRGAP3-201ENST00000360413 ZNF702PQ9H963 129 aa9.6□□□□□ -0.87
SRGAP3-201ENST00000360413 KLLNB2CW77 178 aa9.6□□□□□ -0.87
SRGAP3-201ENST00000360413 LINC00846Q9NV44 126 aa9.6□□□□□ -0.87
SRGAP3-201ENST00000360413 NHLRC4P0CG21 123 aaPredicted RBP9.59□□□□□ -0.87
SRGAP3-201ENST00000360413 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
SRGAP3-201ENST00000360413 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
SRGAP3-201ENST00000360413 LINC01561Q8N1V8 128 aa9.59□□□□□ -0.87
SRGAP3-201ENST00000360413 CYSRT1A8MQ03 144 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 Q9UF83 564 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 CHD8Q9HCK8 2581 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 HCG22E2RYF7 251 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 PRR9Q5T870 116 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
SRGAP3-201ENST00000360413 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
SRGAP3-201ENST00000360413 URB1-AS1Q96HZ7 61 aa9.57□□□□□ -0.88
SRGAP3-201ENST00000360413 M0R2N4 97 aa9.57□□□□□ -0.88
SRGAP3-201ENST00000360413 RETNLBQ9BQ08 111 aa9.57□□□□□ -0.88
SRGAP3-201ENST00000360413 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
SRGAP3-201ENST00000360413 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
SRGAP3-201ENST00000360413 TRBV10-3A0A0K0K1G6 114 aa9.56□□□□□ -0.88
SRGAP3-201ENST00000360413 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
SRGAP3-201ENST00000360413 Q9BRP9 147 aa9.56□□□□□ -0.88
SRGAP3-201ENST00000360413 ACYP2P14621 99 aa9.55□□□□□ -0.88
SRGAP3-201ENST00000360413 COL4A3Q01955 1670 aa9.55□□□□□ -0.88
SRGAP3-201ENST00000360413 A0A1B0GU69 56 aa9.55□□□□□ -0.88
SRGAP3-201ENST00000360413 COX6A2Q02221 97 aa9.55□□□□□ -0.88
SRGAP3-201ENST00000360413 C8orf87E5RJ46 101 aa9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 C9orf116Q5BN46 136 aaPredicted RBP9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 MSMPQ1L6U9 139 aa9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 C1orf64Q8NEQ6 169 aa9.54□□□□□ -0.88
SRGAP3-201ENST00000360413 FASNP49327 2511 aaKnown RBP9.53□□□□□ -0.88
SRGAP3-201ENST00000360413 A0A1B0GUV1 79 aa9.53□□□□□ -0.88
SRGAP3-201ENST00000360413 LY6G6DO95868 133 aa9.53□□□□□ -0.88
SRGAP3-201ENST00000360413 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
SRGAP3-201ENST00000360413 C7orf65Q6ZTY9 151 aa9.52□□□□□ -0.88
SRGAP3-201ENST00000360413 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
SRGAP3-201ENST00000360413 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
SRGAP3-201ENST00000360413 CRIP3Q6Q6R5 217 aa9.51□□□□□ -0.89
SRGAP3-201ENST00000360413 PRM2P04554 102 aa9.51□□□□□ -0.89
SRGAP3-201ENST00000360413 Q8NA96 180 aa9.51□□□□□ -0.89
SRGAP3-201ENST00000360413 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
SRGAP3-201ENST00000360413 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
SRGAP3-201ENST00000360413 LINC01006Q8NI28 216 aa9.5□□□□□ -0.89
SRGAP3-201ENST00000360413 PCSK5Q92824 1860 aa9.5□□□□□ -0.89
SRGAP3-201ENST00000360413 SMIM29Q86T20 159 aa9.49□□□□□ -0.89
SRGAP3-201ENST00000360413 H3BPC8 53 aa9.48□□□□□ -0.89
SRGAP3-201ENST00000360413 IGLV1-40P01703 118 aa9.48□□□□□ -0.89
SRGAP3-201ENST00000360413 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
SRGAP3-201ENST00000360413 Q6ZTC4 211 aa9.48□□□□□ -0.89
SRGAP3-201ENST00000360413 A0A087WSZ3 146 aa9.47□□□□□ -0.89
SRGAP3-201ENST00000360413 EDN2P20800 178 aa9.47□□□□□ -0.89
SRGAP3-201ENST00000360413 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
SRGAP3-201ENST00000360413 PRLHP81277 87 aa9.46□□□□□ -0.9
SRGAP3-201ENST00000360413 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.9
SRGAP3-201ENST00000360413 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
SRGAP3-201ENST00000360413 A8MTW9 85 aa9.44□□□□□ -0.9
SRGAP3-201ENST00000360413 AMELXQ99217 191 aa9.44□□□□□ -0.9
SRGAP3-201ENST00000360413 PLA2G1BP04054 148 aaKnown RBP9.43□□□□□ -0.9
SRGAP3-201ENST00000360413 BCE1O60756 84 aa9.43□□□□□ -0.9
SRGAP3-201ENST00000360413 IGKV2D-30A0A075B6S6 120 aa9.42□□□□□ -0.9
SRGAP3-201ENST00000360413 IGKV2-30P06310 120 aa9.42□□□□□ -0.9
SRGAP3-201ENST00000360413 A0A096LNJ9 63 aa9.42□□□□□ -0.9
SRGAP3-201ENST00000360413 BRI3O95415 125 aa9.41□□□□□ -0.9
SRGAP3-201ENST00000360413 MDFIQ99750 246 aa9.41□□□□□ -0.9
SRGAP3-201ENST00000360413 C10orf99Q6UWK7 81 aa9.41□□□□□ -0.9
SRGAP3-201ENST00000360413 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms