RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CR1P17927 2039 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 EGFEM1PQ0D2K5 195 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 LINC01006Q8NI28 216 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 COX7CP15954 63 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 TRANK1O15050 2925 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 A0A0J9YWU9 116 aa7.08□□□□□ -1.28
CUX1-203ENST00000360264 IGLV1-40P01703 118 aa7.07□□□□□ -1.28
CUX1-203ENST00000360264 Q8N6K4 173 aa7.07□□□□□ -1.28
CUX1-203ENST00000360264 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
CUX1-203ENST00000360264 LINC01561Q8N1V8 128 aa7.07□□□□□ -1.28
CUX1-203ENST00000360264 PLA2G2AP14555 144 aa7.07□□□□□ -1.28
CUX1-203ENST00000360264 EP400Q96L91 3159 aa7.07□□□□□ -1.28
CUX1-203ENST00000360264 SMIM11BQ8TCY0 68 aa7.06□□□□□ -1.28
CUX1-203ENST00000360264 POLR2KP53803 58 aaKnown RBP7.06□□□□□ -1.28
CUX1-203ENST00000360264 CIRBP-AS1Q8TBR5 109 aa7.06□□□□□ -1.28
CUX1-203ENST00000360264 PROK1P58294 105 aa7.06□□□□□ -1.28
CUX1-203ENST00000360264 UTP20O75691 2785 aaKnown RBP7.05□□□□□ -1.28
CUX1-203ENST00000360264 M0QXV9 152 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 Q6Q795 121 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 C1orf137Q5JT78 98 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 C2orf48Q96LS8 159 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 FRMD6-AS1P0C7T7 363 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 TRBV7-6A0A0J9YX20 115 aa7.05□□□□□ -1.28
CUX1-203ENST00000360264 SMIM26A0A096LP01 95 aa7.04□□□□□ -1.28
CUX1-203ENST00000360264 IGHV4-30-4P0DP06 118 aa7.04□□□□□ -1.28
CUX1-203ENST00000360264 NANOS2P60321 138 aaKnown RBP7.04□□□□□ -1.28
CUX1-203ENST00000360264 MRPS12O15235 138 aaKnown RBP7.04□□□□□ -1.28
CUX1-203ENST00000360264 BRWD1-AS2P59051 145 aa7.04□□□□□ -1.28
CUX1-203ENST00000360264 COL4A3Q01955 1670 aa7.04□□□□□ -1.28
CUX1-203ENST00000360264 A0A0U1RQV1 116 aa7.04□□□□□ -1.28
CUX1-203ENST00000360264 SNURFQ9Y675 71 aa7.04□□□□□ -1.28
CUX1-203ENST00000360264 A0A1B0GUV1 79 aa7.03□□□□□ -1.28
CUX1-203ENST00000360264 LINC01556Q5JQF7 62 aa7.03□□□□□ -1.28
CUX1-203ENST00000360264 WFDC10AQ9H1F0 79 aa7.03□□□□□ -1.28
CUX1-203ENST00000360264 NHLRC4P0CG21 123 aaPredicted RBP7.02□□□□□ -1.29
CUX1-203ENST00000360264 POM121L12Q8N7R1 296 aa7.02□□□□□ -1.29
CUX1-203ENST00000360264 BRI3O95415 125 aa7.02□□□□□ -1.29
CUX1-203ENST00000360264 ESRGQ1W209 222 aa7.02□□□□□ -1.29
CUX1-203ENST00000360264 C1orf134Q5TEV5 83 aa7.02□□□□□ -1.29
CUX1-203ENST00000360264 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
CUX1-203ENST00000360264 C10orf99Q6UWK7 81 aa7.01□□□□□ -1.29
CUX1-203ENST00000360264 MAPKAPK5-AS1Q8N8E1 139 aa7.01□□□□□ -1.29
CUX1-203ENST00000360264 Q9BRP9 147 aa7.01□□□□□ -1.29
CUX1-203ENST00000360264 IGHV6-1A0A0B4J1U7 121 aa7.01□□□□□ -1.29
CUX1-203ENST00000360264 Q8N2B8 174 aa7.01□□□□□ -1.29
CUX1-203ENST00000360264 IGIPA6NJ69 53 aa7□□□□□ -1.29
CUX1-203ENST00000360264 C16orf95Q9H693 158 aa7□□□□□ -1.29
CUX1-203ENST00000360264 C22orf34Q6ZV56 151 aa7□□□□□ -1.29
CUX1-203ENST00000360264 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
CUX1-203ENST00000360264 PMAIP1Q13794 54 aa7□□□□□ -1.29
CUX1-203ENST00000360264 MUC22E2RYF6 1773 aaPredicted RBP7□□□□□ -1.29
CUX1-203ENST00000360264 C1orf229Q6ZS94 237 aaPredicted RBP6.99□□□□□ -1.29
CUX1-203ENST00000360264 LINC00526Q96FQ7 95 aa6.99□□□□□ -1.29
CUX1-203ENST00000360264 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
CUX1-203ENST00000360264 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
CUX1-203ENST00000360264 PCSK5Q92824 1860 aa6.99□□□□□ -1.29
CUX1-203ENST00000360264 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
CUX1-203ENST00000360264 PRR4Q16378 134 aa6.98□□□□□ -1.29
CUX1-203ENST00000360264 C1orf195Q5TG92 126 aa6.98□□□□□ -1.29
CUX1-203ENST00000360264 TRBV10-3A0A0K0K1G6 114 aa6.97□□□□□ -1.29
CUX1-203ENST00000360264 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
CUX1-203ENST00000360264 ZNF580Q9UK33 172 aa6.97□□□□□ -1.29
CUX1-203ENST00000360264 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
CUX1-203ENST00000360264 X6R8D5 127 aa6.97□□□□□ -1.29
CUX1-203ENST00000360264 PRO3102Q9H379 93 aa6.97□□□□□ -1.29
CUX1-203ENST00000360264 C2orf91Q6ZV80 131 aa6.97□□□□□ -1.29
CUX1-203ENST00000360264 PRR9Q5T870 116 aa6.96□□□□□ -1.29
CUX1-203ENST00000360264 HCG22E2RYF7 251 aa6.96□□□□□ -1.29
CUX1-203ENST00000360264 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.29
CUX1-203ENST00000360264 Q6ZPA2 131 aa6.96□□□□□ -1.3
CUX1-203ENST00000360264 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.3
CUX1-203ENST00000360264 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.3
CUX1-203ENST00000360264 BEAN1Q3B7T3 259 aa6.96□□□□□ -1.3
CUX1-203ENST00000360264 CRIP2P52943 208 aaPredicted RBP6.95□□□□□ -1.3
CUX1-203ENST00000360264 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
CUX1-203ENST00000360264 H0Y9P7 68 aa6.95□□□□□ -1.3
CUX1-203ENST00000360264 ODF3L2Q3SX64 289 aa6.94□□□□□ -1.3
CUX1-203ENST00000360264 AMELXQ99217 191 aa6.94□□□□□ -1.3
CUX1-203ENST00000360264 COX8CQ7Z4L0 72 aa6.94□□□□□ -1.3
CUX1-203ENST00000360264 FHL2Q14192 279 aa6.94□□□□□ -1.3
CUX1-203ENST00000360264 A8MZ25 164 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 CXCL6P80162 114 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 C11orf21Q9P2W6 132 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 Q6ZS46 218 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 LINC00208Q96KT6 92 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 C18orf65Q6ZTR6 163 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 WISP2O76076 250 aa6.93□□□□□ -1.3
CUX1-203ENST00000360264 TRBV7-7A0A0K0K1E9 115 aa6.92□□□□□ -1.3
CUX1-203ENST00000360264 A0A1B0GW54 56 aa6.92□□□□□ -1.3
CUX1-203ENST00000360264 PCOTHQ58A44 107 aa6.92□□□□□ -1.3
CUX1-203ENST00000360264 Q8N3U1 123 aa6.91□□□□□ -1.3
CUX1-203ENST00000360264 COX6A2Q02221 97 aa6.91□□□□□ -1.3
CUX1-203ENST00000360264 LINC00575Q6W349 94 aa6.91□□□□□ -1.3
CUX1-203ENST00000360264 CCDC179H3BU77 68 aa6.91□□□□□ -1.3
CUX1-203ENST00000360264 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms