RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 UBE2WQ96B02 151 aa3.61□□□□□ -1.83
ATXN3-202ENST00000359366 KLK5Q9Y337 293 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-202ENST00000359366 TRBV6-5A0A0K0K1A5 114 aa3.61□□□□□ -1.83
ATXN3-202ENST00000359366 H3BT86 120 aa3.61□□□□□ -1.83
ATXN3-202ENST00000359366 CMC4P56277 68 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-202ENST00000359366 HIST1H4AP62805 103 aaKnown RBP3.61□□□□□ -1.83
ATXN3-202ENST00000359366 SLC25A29Q8N8R3 303 aa3.61□□□□□ -1.83
ATXN3-202ENST00000359366 LINC00467Q9BRT7 94 aa3.61□□□□□ -1.83
ATXN3-202ENST00000359366 HHLA3Q9XRX5 114 aa3.61□□□□□ -1.83
ATXN3-202ENST00000359366 A0A096LPF7 62 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 IGIPA6NJ69 53 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 I3L3M4 83 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 TCL1BO95988 128 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 PPP1R17O96001 155 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 IGHV4-30-4P0DP06 118 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 ATXN8Q156A1 80 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 C5orf38Q86SI9 138 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 SERP2Q8N6R1 65 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 C16orf74Q96GX8 76 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 X6R8D5 127 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 COL7A1Q02388 2944 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 TRBV10-2A0A0K0K1G8 114 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 hADV29S1A0JD25 119 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 LINC01549A6NIU2 74 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 WFDC9Q8NEX5 89 aa3.6□□□□□ -1.83
ATXN3-202ENST00000359366 IGHV3-64A0A075B6Q5 118 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 TRGV4A0A0C4DH28 118 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 K7EMI3 77 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 OXTP01178 125 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 CD164L2Q6UWJ8 174 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 Q6ZRU5 148 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 C20orf203Q8NBC4 194 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 NTN5Q8WTR8 489 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-202ENST00000359366 CELA1Q9UNI1 258 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 STAB2Q8WWQ8 2551 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 C11orf86A6NJI1 115 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 K7EQD1 137 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 DAZ2Q13117 558 aaKnown RBP3.59□□□□□ -1.83
ATXN3-202ENST00000359366 FAM222AQ5U5X8 452 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 MRPL55Q7Z7F7 128 aaKnown RBP3.59□□□□□ -1.83
ATXN3-202ENST00000359366 MAPKAPK5-AS1Q8N8E1 139 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 DSCR8Q96T75 97 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 CHCHD7Q9BUK0 85 aa3.59□□□□□ -1.83
ATXN3-202ENST00000359366 IGLV4-69A0A075B6H9 119 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 A0A0J9YY99 117 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 F8VRH5 84 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 EIF4EBP3O60516 100 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-202ENST00000359366 HTN3P15516 51 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 NTM-AS1Q6ZSK4 140 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 A0A0J9YXV3 536 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 A0A0U1RQV1 116 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 PLNP26678 52 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 HERVK_113P61574 105 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 RPL18AQ02543 176 aaKnown RBP3.58□□□□□ -1.84
ATXN3-202ENST00000359366 SRSF9Q13242 221 aaKnown RBP eCLIP3.58□□□□□ -1.84
ATXN3-202ENST00000359366 FHL2Q14192 279 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 SDIM1Q6ZPB5 146 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 PRR15Q8IV56 129 aa3.58□□□□□ -1.84
ATXN3-202ENST00000359366 ATP5EP56381 51 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-202ENST00000359366 RHOHQ15669 191 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 OVOL2Q9BRP0 275 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 UPK3BQ9BT76 320 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 IGKV3OR2-268A0A0C4DH90 116 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
ATXN3-202ENST00000359366 PIK3CD-AS1Q5SR53 167 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 RPL36ALQ969Q0 106 aaKnown RBP3.57□□□□□ -1.84
ATXN3-202ENST00000359366 LYSTQ99698 3801 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 TRAV12-1A0A0B4J245 112 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 TRBV7-6A0A0J9YX20 115 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 GYPEP15421 78 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 APOC4P55056 127 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 TSPEAR-AS2P59090 65 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 TIMM17AQ99595 171 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 PRO1854Q9UHT4 67 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
ATXN3-202ENST00000359366 LINC01561Q8N1V8 128 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 Q8NAQ8 132 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 TMEM141Q96I45 108 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 TRAV8-3A0A0A6YYJ7 113 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 TEX49A0A1B0GTD5 131 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 VPREB1P12018 145 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
ATXN3-202ENST00000359366 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 A0A0B4J2C4 111 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 DAD1P61803 113 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 TRBV10-1A0A0K0K1A3 114 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 COX6A2Q02221 97 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 C2orf82Q6UX34 121 aa3.55□□□□□ -1.84
ATXN3-202ENST00000359366 HUWE1Q7Z6Z7 4374 aaKnown RBP3.54□□□□□ -1.84
ATXN3-202ENST00000359366 IGLV4-60A0A075B6I1 120 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 TRBV30A0A0K0K1B3 111 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 TRBV6-4A0A1B0GX49 114 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 ZNF815PA8K554 130 aa3.54□□□□□ -1.84
ATXN3-202ENST00000359366 BCE1O60756 84 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms