RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
CCDC197-201ENST00000359253 IBA57-AS1B1ANH7 110 aa9.1□□□□□ -0.95
CCDC197-201ENST00000359253 TAX1BP3O14907 124 aa9.1□□□□□ -0.95
CCDC197-201ENST00000359253 MEIG1Q5JSS6 88 aa9.1□□□□□ -0.95
CCDC197-201ENST00000359253 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
CCDC197-201ENST00000359253 RMI2Q96E14 147 aa9.1□□□□□ -0.95
CCDC197-201ENST00000359253 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
CCDC197-201ENST00000359253 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
CCDC197-201ENST00000359253 CKS1BP61024 79 aa9.09□□□□□ -0.95
CCDC197-201ENST00000359253 C1orf43Q9BWL3 253 aa9.09□□□□□ -0.95
CCDC197-201ENST00000359253 NHP2Q9NX24 153 aaKnown RBP9.09□□□□□ -0.95
CCDC197-201ENST00000359253 APLNQ9ULZ1 77 aa9.09□□□□□ -0.95
CCDC197-201ENST00000359253 A0A1B0GV90 55 aa9.08□□□□□ -0.96
CCDC197-201ENST00000359253 F8WDY8 70 aa9.08□□□□□ -0.96
CCDC197-201ENST00000359253 COX17Q14061 63 aa9.08□□□□□ -0.96
CCDC197-201ENST00000359253 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
CCDC197-201ENST00000359253 C9orf118A6NHY6 69 aa9.07□□□□□ -0.96
CCDC197-201ENST00000359253 KIAA0087Q14695 138 aa9.07□□□□□ -0.96
CCDC197-201ENST00000359253 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
CCDC197-201ENST00000359253 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
CCDC197-201ENST00000359253 KRTAP26-1Q6PEX3 210 aa9.05□□□□□ -0.96
CCDC197-201ENST00000359253 CSMD3Q7Z407 3707 aa9.05□□□□□ -0.96
CCDC197-201ENST00000359253 A4D1N5 150 aa9.04□□□□□ -0.96
CCDC197-201ENST00000359253 SPAG11BQ08648 103 aa9.04□□□□□ -0.96
CCDC197-201ENST00000359253 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
CCDC197-201ENST00000359253 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
CCDC197-201ENST00000359253 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
CCDC197-201ENST00000359253 CFC1BP0CG36 223 aa9.03□□□□□ -0.96
CCDC197-201ENST00000359253 CFC1P0CG37 223 aa9.03□□□□□ -0.96
CCDC197-201ENST00000359253 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
CCDC197-201ENST00000359253 GVQW2A0A096LPI5 108 aaPredicted RBP9.02□□□□□ -0.97
CCDC197-201ENST00000359253 LINC00158P58513 81 aa9.02□□□□□ -0.97
CCDC197-201ENST00000359253 RAB37Q96AX2 223 aa9.02□□□□□ -0.97
CCDC197-201ENST00000359253 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
CCDC197-201ENST00000359253 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
CCDC197-201ENST00000359253 LCE6AA0A183 80 aa9.01□□□□□ -0.97
CCDC197-201ENST00000359253 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
CCDC197-201ENST00000359253 NTN5Q8WTR8 489 aaPredicted RBP9.01□□□□□ -0.97
CCDC197-201ENST00000359253 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
CCDC197-201ENST00000359253 STARD9Q9P2P6 4700 aa9.01□□□□□ -0.97
CCDC197-201ENST00000359253 LOC107984156A0A0G2JMH3 177 aa9□□□□□ -0.97
CCDC197-201ENST00000359253 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
CCDC197-201ENST00000359253 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
CCDC197-201ENST00000359253 ARL17AQ8IVW1 177 aa9□□□□□ -0.97
CCDC197-201ENST00000359253 MIR7-3HGQ8N6C7 128 aa9□□□□□ -0.97
CCDC197-201ENST00000359253 A0A1W2PPM0 123 aa8.99□□□□□ -0.97
CCDC197-201ENST00000359253 H3BUT2 72 aa8.99□□□□□ -0.97
CCDC197-201ENST00000359253 K7ERJ3 54 aa8.99□□□□□ -0.97
CCDC197-201ENST00000359253 FABP2P12104 132 aa8.99□□□□□ -0.97
CCDC197-201ENST00000359253 VAMP3Q15836 100 aa8.99□□□□□ -0.97
CCDC197-201ENST00000359253 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
CCDC197-201ENST00000359253 DYNC2H1Q8NCM8 4307 aaKnown RBP8.99□□□□□ -0.97
CCDC197-201ENST00000359253 C2orf82Q6UX34 121 aa8.98□□□□□ -0.97
CCDC197-201ENST00000359253 GTF2H5Q6ZYL4 71 aa8.98□□□□□ -0.97
CCDC197-201ENST00000359253 A0A0U1RRA0 63 aa8.97□□□□□ -0.97
CCDC197-201ENST00000359253 PFN2P35080 140 aa8.97□□□□□ -0.97
CCDC197-201ENST00000359253 DAND5Q8N907 189 aa8.97□□□□□ -0.97
CCDC197-201ENST00000359253 LINC00476Q8WZB0 136 aa8.97□□□□□ -0.97
CCDC197-201ENST00000359253 Q9HAA7 133 aa8.97□□□□□ -0.97
CCDC197-201ENST00000359253 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
CCDC197-201ENST00000359253 PLECQ15149 4684 aaKnown RBP8.96□□□□□ -0.97
CCDC197-201ENST00000359253 UBE2V1Q13404 147 aa8.96□□□□□ -0.98
CCDC197-201ENST00000359253 C15orf56Q8N910 161 aa8.96□□□□□ -0.98
CCDC197-201ENST00000359253 TRAV13-2A0A0B4J235 113 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 NPC2P61916 151 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 RNF151Q2KHN1 245 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 UNQ6190/PRO20217Q6UXQ8 127 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 CAMK2N2Q96S95 79 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 SND1-IT1Q9HBX3 110 aa8.95□□□□□ -0.98
CCDC197-201ENST00000359253 KMT2CQ8NEZ4 4911 aaKnown RBP8.95□□□□□ -0.98
CCDC197-201ENST00000359253 GAGE10A6NGK3 116 aa8.94□□□□□ -0.98
CCDC197-201ENST00000359253 NDUFC2O95298 119 aa8.94□□□□□ -0.98
CCDC197-201ENST00000359253 TSPAN13O95857 204 aa8.94□□□□□ -0.98
CCDC197-201ENST00000359253 LY6G6CO95867 125 aa8.94□□□□□ -0.98
CCDC197-201ENST00000359253 C6orf223Q8N319 242 aa8.93□□□□□ -0.98
CCDC197-201ENST00000359253 TRBV20-1A0A075B6N2 111 aa8.92□□□□□ -0.98
CCDC197-201ENST00000359253 K7EP34 96 aa8.92□□□□□ -0.98
CCDC197-201ENST00000359253 COX6CP09669 75 aa8.92□□□□□ -0.98
CCDC197-201ENST00000359253 SPCS1Q9Y6A9 102 aa8.92□□□□□ -0.98
CCDC197-201ENST00000359253 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
CCDC197-201ENST00000359253 EIF4EBP3O60516 100 aaPredicted RBP8.91□□□□□ -0.98
CCDC197-201ENST00000359253 SYCNQ0VAF6 134 aa8.91□□□□□ -0.98
CCDC197-201ENST00000359253 Q1RN00 199 aa8.91□□□□□ -0.98
CCDC197-201ENST00000359253 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
CCDC197-201ENST00000359253 C10orf25Q5T742 122 aa8.91□□□□□ -0.98
CCDC197-201ENST00000359253 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
CCDC197-201ENST00000359253 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
CCDC197-201ENST00000359253 C14orf177Q52M58 125 aa8.9□□□□□ -0.98
CCDC197-201ENST00000359253 SCGB1C2P0DMR2 95 aa8.89□□□□□ -0.99
CCDC197-201ENST00000359253 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
CCDC197-201ENST00000359253 PSMB2P49721 201 aa8.89□□□□□ -0.99
CCDC197-201ENST00000359253 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
CCDC197-201ENST00000359253 NDUFC2-KCTD14E9PQ53 114 aa8.88□□□□□ -0.99
CCDC197-201ENST00000359253 PSCAO43653 123 aa8.88□□□□□ -0.99
CCDC197-201ENST00000359253 TLX1NBP0CAT3 122 aa8.88□□□□□ -0.99
CCDC197-201ENST00000359253 C9orf116Q5BN46 136 aaPredicted RBP8.88□□□□□ -0.99
CCDC197-201ENST00000359253 Q6ZRU5 148 aa8.88□□□□□ -0.99
CCDC197-201ENST00000359253 LINC00526Q96FQ7 95 aa8.88□□□□□ -0.99
CCDC197-201ENST00000359253 SACSQ9NZJ4 4579 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms