RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CFHR3Q02985 330 aa6.67□□□□□ -1.34
SMARCAL1-202ENST00000358207 COL6A5A8TX70 2615 aa6.67□□□□□ -1.34
SMARCAL1-202ENST00000358207 DEFB1P60022 68 aa6.67□□□□□ -1.34
SMARCAL1-202ENST00000358207 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
SMARCAL1-202ENST00000358207 A0A087WWL8 130 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 CTSGP08311 255 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 DEFB136Q30KP8 78 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 A0A087WYN8 130 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 RPL11P62913 178 aaKnown RBP6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
SMARCAL1-202ENST00000358207 A6NDX4 124 aa6.65□□□□□ -1.34
SMARCAL1-202ENST00000358207 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.34
SMARCAL1-202ENST00000358207 C20orf203Q8NBC4 194 aa6.65□□□□□ -1.34
SMARCAL1-202ENST00000358207 FAM110DQ8TAY7 271 aaPredicted RBP6.65□□□□□ -1.34
SMARCAL1-202ENST00000358207 UNQ9165/PRO28630Q6UXU0 137 aa6.65□□□□□ -1.34
SMARCAL1-202ENST00000358207 C18orf65Q6ZTR6 163 aa6.65□□□□□ -1.34
SMARCAL1-202ENST00000358207 ZFAND2AQ8N6M9 145 aa6.65□□□□□ -1.35
SMARCAL1-202ENST00000358207 ESM1Q9NQ30 184 aa6.65□□□□□ -1.35
SMARCAL1-202ENST00000358207 F5H697 171 aa6.64□□□□□ -1.35
SMARCAL1-202ENST00000358207 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
SMARCAL1-202ENST00000358207 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
SMARCAL1-202ENST00000358207 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 A0A087WZ39 114 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 C4orf48Q5BLP8 95 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 KPRPQ5T749 579 aaPredicted RBP6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 C6orf223Q8N319 242 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 U3KQE9 123 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 PLAC8L1A1L4L8 177 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 Q6YL49 198 aa6.63□□□□□ -1.35
SMARCAL1-202ENST00000358207 TRBV6-5A0A0K0K1A5 114 aa6.62□□□□□ -1.35
SMARCAL1-202ENST00000358207 NOTCH1P46531 2555 aa6.62□□□□□ -1.35
SMARCAL1-202ENST00000358207 DNAJC9-AS1A6NH13 148 aa6.62□□□□□ -1.35
SMARCAL1-202ENST00000358207 IBA57-AS1B1ANH7 110 aa6.62□□□□□ -1.35
SMARCAL1-202ENST00000358207 SOCS3O14543 225 aa6.62□□□□□ -1.35
SMARCAL1-202ENST00000358207 PIK3CD-AS1Q5SR53 167 aa6.62□□□□□ -1.35
SMARCAL1-202ENST00000358207 C11orf72Q8NBR9 251 aa6.61□□□□□ -1.35
SMARCAL1-202ENST00000358207 NDUFA1O15239 70 aa6.61□□□□□ -1.35
SMARCAL1-202ENST00000358207 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
SMARCAL1-202ENST00000358207 TRAV21A0A0B4J279 112 aa6.61□□□□□ -1.35
SMARCAL1-202ENST00000358207 SLPIP03973 132 aa6.61□□□□□ -1.35
SMARCAL1-202ENST00000358207 CD28P10747 220 aa6.61□□□□□ -1.35
SMARCAL1-202ENST00000358207 MED14OSP0DP75 135 aa6.6□□□□□ -1.35
SMARCAL1-202ENST00000358207 FAM74A4Q5TZK3 123 aa6.6□□□□□ -1.35
SMARCAL1-202ENST00000358207 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
SMARCAL1-202ENST00000358207 M0QY20 66 aa6.6□□□□□ -1.35
SMARCAL1-202ENST00000358207 ATP5EP2Q5VTU8 51 aa6.6□□□□□ -1.35
SMARCAL1-202ENST00000358207 PKD1L1Q8TDX9 2849 aa6.6□□□□□ -1.35
SMARCAL1-202ENST00000358207 Q9H8V8 135 aa6.59□□□□□ -1.35
SMARCAL1-202ENST00000358207 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.35
SMARCAL1-202ENST00000358207 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
SMARCAL1-202ENST00000358207 TRBV10-3A0A0K0K1G6 114 aa6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 MRPL53Q96EL3 112 aaKnown RBP6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 ZNF702PQ9H963 129 aa6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 F6UB75 175 aa6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 BCE1O60756 84 aa6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
SMARCAL1-202ENST00000358207 LECT2O14960 151 aa6.57□□□□□ -1.36
SMARCAL1-202ENST00000358207 MIFP14174 115 aa6.57□□□□□ -1.36
SMARCAL1-202ENST00000358207 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
SMARCAL1-202ENST00000358207 TM2D3Q9BRN9 247 aa6.57□□□□□ -1.36
SMARCAL1-202ENST00000358207 SLURP1P55000 103 aa6.57□□□□□ -1.36
SMARCAL1-202ENST00000358207 TRBV7-4A0A0J9YYF1 115 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 ESRGQ1W209 222 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 Q6ZTI0 123 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 LENEPQ9Y5L5 61 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 A8MU10 97 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 STHQ8IWL8 128 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 RBM12B-AS1Q9P1G2 102 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 KLK9Q9UKQ9 250 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 NDUFC1O43677 76 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 PROK1P58294 105 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 DAD1P61803 113 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 C19orf54Q5BKX5 351 aa6.56□□□□□ -1.36
SMARCAL1-202ENST00000358207 COX6A2Q02221 97 aa6.55□□□□□ -1.36
SMARCAL1-202ENST00000358207 RHPN1-AS1Q9BWJ2 59 aa6.55□□□□□ -1.36
SMARCAL1-202ENST00000358207 IGLV1-40P01703 118 aa6.54□□□□□ -1.36
SMARCAL1-202ENST00000358207 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
SMARCAL1-202ENST00000358207 Q6ZTC4 211 aa6.53□□□□□ -1.36
SMARCAL1-202ENST00000358207 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
SMARCAL1-202ENST00000358207 Q9UF83 564 aa6.53□□□□□ -1.36
SMARCAL1-202ENST00000358207 IGHV3-38A0A0C4DH36 116 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGLV5-39A0A0G2JS06 123 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 LRCOL1A6NCL2 159 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 Q6ZRP5 223 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 ORMDL1Q9P0S3 153 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 CRPP02741 224 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 UBL5Q9BZL1 73 aa6.52□□□□□ -1.37
SMARCAL1-202ENST00000358207 MGAM2Q2M2H8 2515 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms