RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 IGHV4-31P0DP07 118 aa8.4□□□□□ -1.06
SMARCAL1-201ENST00000357276 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.07
SMARCAL1-201ENST00000357276 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
SMARCAL1-201ENST00000357276 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
SMARCAL1-201ENST00000357276 TRAV23DV6A0A075B6W5 121 aa8.39□□□□□ -1.07
SMARCAL1-201ENST00000357276 ENHOQ6UWT2 76 aa8.39□□□□□ -1.07
SMARCAL1-201ENST00000357276 AKAP9Q99996 3911 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 NBPF19A0A087WUL8 3843 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 FAM208BQ5VWN6 2430 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 LINC00959A0A1B0GUT2 108 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 Q8IZM0 81 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 CREBBPQ92793 2442 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
SMARCAL1-201ENST00000357276 MAP1AP78559 2803 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-201ENST00000357276 XCL1P47992 114 aa8.37□□□□□ -1.07
SMARCAL1-201ENST00000357276 HRCT1Q6UXD1 115 aa8.37□□□□□ -1.07
SMARCAL1-201ENST00000357276 IGKV3OR2-268A0A0C4DH90 116 aa8.37□□□□□ -1.07
SMARCAL1-201ENST00000357276 C11orf44Q8N8P7 122 aa8.37□□□□□ -1.07
SMARCAL1-201ENST00000357276 C16orf74Q96GX8 76 aa8.37□□□□□ -1.07
SMARCAL1-201ENST00000357276 H7BZZ5 65 aa8.36□□□□□ -1.07
SMARCAL1-201ENST00000357276 TMEM86BQ8N661 226 aa8.36□□□□□ -1.07
SMARCAL1-201ENST00000357276 LOC110117498A0A087WWA1 95 aa8.35□□□□□ -1.07
SMARCAL1-201ENST00000357276 C6orf226Q5I0X4 101 aa8.35□□□□□ -1.07
SMARCAL1-201ENST00000357276 Q6ZQT0 140 aa8.35□□□□□ -1.07
SMARCAL1-201ENST00000357276 UBL5Q9BZL1 73 aa8.35□□□□□ -1.07
SMARCAL1-201ENST00000357276 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
SMARCAL1-201ENST00000357276 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
SMARCAL1-201ENST00000357276 FAM236DA0A1B0GTK5 79 aa8.34□□□□□ -1.07
SMARCAL1-201ENST00000357276 FAM236CP0DP71 79 aa8.34□□□□□ -1.07
SMARCAL1-201ENST00000357276 KLKP1Q107X0 134 aa8.34□□□□□ -1.07
SMARCAL1-201ENST00000357276 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.07
SMARCAL1-201ENST00000357276 PRR3P79522 188 aaKnown RBP8.34□□□□□ -1.07
SMARCAL1-201ENST00000357276 COX17Q14061 63 aa8.34□□□□□ -1.08
SMARCAL1-201ENST00000357276 LINC00482Q8N8I6 264 aa8.34□□□□□ -1.08
SMARCAL1-201ENST00000357276 FBN2P35556 2912 aa8.33□□□□□ -1.08
SMARCAL1-201ENST00000357276 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
SMARCAL1-201ENST00000357276 CSNK1G2-AS1Q8NCQ2 148 aa8.33□□□□□ -1.08
SMARCAL1-201ENST00000357276 SERP1Q9Y6X1 66 aa8.33□□□□□ -1.08
SMARCAL1-201ENST00000357276 LRRK2Q5S007 2527 aa8.33□□□□□ -1.08
SMARCAL1-201ENST00000357276 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 USP9YO00507 2555 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 LINC00575Q6W349 94 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 C6orf223Q8N319 242 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 ZANQ9Y493 2812 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 IGHV4-28A0A0C4DH34 117 aa8.32□□□□□ -1.08
SMARCAL1-201ENST00000357276 MRAPQ8TCY5 172 aa8.31□□□□□ -1.08
SMARCAL1-201ENST00000357276 Q8NDZ9 215 aa8.31□□□□□ -1.08
SMARCAL1-201ENST00000357276 C11orf68Q9H3H3 251 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-201ENST00000357276 LINC01547P58512 204 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-201ENST00000357276 CHD6Q8TD26 2715 aa8.3□□□□□ -1.08
SMARCAL1-201ENST00000357276 ZNF561-AS1K7EIQ3 104 aa8.3□□□□□ -1.08
SMARCAL1-201ENST00000357276 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
SMARCAL1-201ENST00000357276 RBM3P98179 157 aaKnown RBP8.29□□□□□ -1.08
SMARCAL1-201ENST00000357276 C9orf66Q5T8R8 295 aa8.29□□□□□ -1.08
SMARCAL1-201ENST00000357276 C6orf99Q4VX62 202 aa8.29□□□□□ -1.08
SMARCAL1-201ENST00000357276 MAPK1IP1LQ8NDC0 245 aa8.29□□□□□ -1.08
SMARCAL1-201ENST00000357276 TENM4Q6N022 2769 aa8.29□□□□□ -1.08
SMARCAL1-201ENST00000357276 M0R2N4 97 aa8.28□□□□□ -1.08
SMARCAL1-201ENST00000357276 KHDC1LQ5JSQ8 128 aa8.28□□□□□ -1.08
SMARCAL1-201ENST00000357276 C19orf73Q9NVV2 129 aa8.28□□□□□ -1.08
SMARCAL1-201ENST00000357276 CXCL6P80162 114 aa8.28□□□□□ -1.08
SMARCAL1-201ENST00000357276 Q6ZVQ6 151 aa8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 WFDC11Q8NEX6 87 aa8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 C16orf95Q9H693 158 aa8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 TRAV10A0A0B4J240 114 aa8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 CMC4P56277 68 aaPredicted RBP8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 LINC00612Q8N6U2 182 aa8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 SPG11Q96JI7 2443 aa8.27□□□□□ -1.09
SMARCAL1-201ENST00000357276 C2CD3Q4AC94 2353 aa8.26□□□□□ -1.09
SMARCAL1-201ENST00000357276 NOTCH3Q9UM47 2321 aa8.26□□□□□ -1.09
SMARCAL1-201ENST00000357276 KRTAP1-1Q07627 177 aa8.25□□□□□ -1.09
SMARCAL1-201ENST00000357276 APCP25054 2843 aa8.25□□□□□ -1.09
SMARCAL1-201ENST00000357276 SETXQ7Z333 2677 aaKnown RBP8.25□□□□□ -1.09
SMARCAL1-201ENST00000357276 PDE6GP18545 87 aa8.25□□□□□ -1.09
SMARCAL1-201ENST00000357276 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
SMARCAL1-201ENST00000357276 CCL24O00175 119 aa8.24□□□□□ -1.09
SMARCAL1-201ENST00000357276 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
SMARCAL1-201ENST00000357276 WFDC10AQ9H1F0 79 aa8.24□□□□□ -1.09
SMARCAL1-201ENST00000357276 PTPN13Q12923 2485 aa8.24□□□□□ -1.09
SMARCAL1-201ENST00000357276 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
SMARCAL1-201ENST00000357276 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
SMARCAL1-201ENST00000357276 TRBV7-4A0A0J9YYF1 115 aa8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 H3BQ85 93 aa8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 LINC00336Q6ZUF6 198 aa8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 MUC7Q8TAX7 377 aa8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 PDZD2O15018 2839 aa8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 RMI2Q96E14 147 aa8.23□□□□□ -1.09
SMARCAL1-201ENST00000357276 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
SMARCAL1-201ENST00000357276 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
SMARCAL1-201ENST00000357276 SPATA3Q8NHX4 192 aa8.22□□□□□ -1.09
SMARCAL1-201ENST00000357276 RPL35AP18077 110 aaKnown RBP8.21□□□□□ -1.09
SMARCAL1-201ENST00000357276 NDUFC1O43677 76 aa8.21□□□□□ -1.1
SMARCAL1-201ENST00000357276 GYPEP15421 78 aa8.21□□□□□ -1.1
SMARCAL1-201ENST00000357276 CLPSL2Q6UWE3 100 aa8.21□□□□□ -1.1
SMARCAL1-201ENST00000357276 LAMTOR3Q9UHA4 124 aa8.21□□□□□ -1.1
SMARCAL1-201ENST00000357276 SNURFQ9Y675 71 aa8.21□□□□□ -1.1
SMARCAL1-201ENST00000357276 NAV2Q8IVL1 2488 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms