RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PSMG3-AS1Q96PY0 264 aa10.23□□□□□ -0.77
SREBF1-202ENST00000355815 TEP1Q99973 2627 aaKnown RBP10.23□□□□□ -0.77
SREBF1-202ENST00000355815 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
SREBF1-202ENST00000355815 IGKV2D-24A0A075B6R9 120 aa10.23□□□□□ -0.77
SREBF1-202ENST00000355815 UBE2BP63146 152 aa10.23□□□□□ -0.77
SREBF1-202ENST00000355815 SPAG11BQ08648 103 aa10.23□□□□□ -0.77
SREBF1-202ENST00000355815 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
SREBF1-202ENST00000355815 SMR3AQ99954 134 aa10.22□□□□□ -0.77
SREBF1-202ENST00000355815 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.77
SREBF1-202ENST00000355815 NDUFS5O43920 106 aa10.21□□□□□ -0.77
SREBF1-202ENST00000355815 SEC61GP60059 68 aa10.21□□□□□ -0.77
SREBF1-202ENST00000355815 CDK2AP2O75956 126 aa10.21□□□□□ -0.78
SREBF1-202ENST00000355815 PLA2G2AP14555 144 aa10.2□□□□□ -0.78
SREBF1-202ENST00000355815 HRNRQ86YZ3 2850 aaPredicted RBP10.2□□□□□ -0.78
SREBF1-202ENST00000355815 BPY2O14599 106 aa10.2□□□□□ -0.78
SREBF1-202ENST00000355815 C3orf84H3BNL1 204 aa10.2□□□□□ -0.78
SREBF1-202ENST00000355815 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
SREBF1-202ENST00000355815 C4orf3Q8WVX3 66 aa10.19□□□□□ -0.78
SREBF1-202ENST00000355815 DIRC1Q969H9 104 aa10.19□□□□□ -0.78
SREBF1-202ENST00000355815 LOC100131303A0A0U1RQF7 123 aa10.19□□□□□ -0.78
SREBF1-202ENST00000355815 NDUFC2-KCTD14E9PQ53 114 aa10.19□□□□□ -0.78
SREBF1-202ENST00000355815 C1orf195Q5TG92 126 aa10.19□□□□□ -0.78
SREBF1-202ENST00000355815 Q6ZQY7 126 aa10.19□□□□□ -0.78
SREBF1-202ENST00000355815 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
SREBF1-202ENST00000355815 HILS1P60008 231 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 Q6ZSN1 163 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 FAM19A1Q7Z5A9 133 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 C9orf85Q96MD7 179 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 GCN1Q92616 2671 aaKnown RBP10.18□□□□□ -0.78
SREBF1-202ENST00000355815 MGAM2Q2M2H8 2515 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 PSCAO43653 123 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
SREBF1-202ENST00000355815 CUBNO60494 3623 aa10.17□□□□□ -0.78
SREBF1-202ENST00000355815 ETDCA0A1B0GVM5 59 aa10.17□□□□□ -0.78
SREBF1-202ENST00000355815 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
SREBF1-202ENST00000355815 NF1P21359 2839 aa10.17□□□□□ -0.78
SREBF1-202ENST00000355815 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
SREBF1-202ENST00000355815 MRPS36P82909 103 aaKnown RBP10.16□□□□□ -0.78
SREBF1-202ENST00000355815 DEFB135Q30KP9 77 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 CELSR1Q9NYQ6 3014 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 TMEM89A2RUT3 159 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 FHL3Q13643 280 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 LINC00482Q8N8I6 264 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 CCL18P55774 89 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 MP68P56378 58 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
SREBF1-202ENST00000355815 UBR5O95071 2799 aaPredicted RBP10.15□□□□□ -0.78
SREBF1-202ENST00000355815 A0A087WYN8 130 aa10.15□□□□□ -0.78
SREBF1-202ENST00000355815 NANOS2P60321 138 aaKnown RBP10.15□□□□□ -0.78
SREBF1-202ENST00000355815 COX6A2Q02221 97 aa10.15□□□□□ -0.78
SREBF1-202ENST00000355815 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
SREBF1-202ENST00000355815 CELA1Q9UNI1 258 aa10.15□□□□□ -0.78
SREBF1-202ENST00000355815 A0A096LNI7 61 aa10.15□□□□□ -0.79
SREBF1-202ENST00000355815 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 C1orf158Q8N1D5 194 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 RETNQ9HD89 108 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 TRBV10-1A0A0K0K1A3 114 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 LINC01006Q8NI28 216 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
SREBF1-202ENST00000355815 CCKP06307 115 aa10.13□□□□□ -0.79
SREBF1-202ENST00000355815 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
SREBF1-202ENST00000355815 LINC00315P59091 139 aa10.13□□□□□ -0.79
SREBF1-202ENST00000355815 FBN2P35556 2912 aa10.13□□□□□ -0.79
SREBF1-202ENST00000355815 COX7BP24311 80 aa10.12□□□□□ -0.79
SREBF1-202ENST00000355815 IBA57-AS1B1ANH7 110 aa10.12□□□□□ -0.79
SREBF1-202ENST00000355815 NHLRC4P0CG21 123 aaPredicted RBP10.12□□□□□ -0.79
SREBF1-202ENST00000355815 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
SREBF1-202ENST00000355815 Q8N2B8 174 aa10.11□□□□□ -0.79
SREBF1-202ENST00000355815 Q6JHZ5 121 aa10.11□□□□□ -0.79
SREBF1-202ENST00000355815 MRPL55Q7Z7F7 128 aaKnown RBP10.11□□□□□ -0.79
SREBF1-202ENST00000355815 APOC4P55056 127 aa10.1□□□□□ -0.79
SREBF1-202ENST00000355815 MAST4O15021 2626 aa10.1□□□□□ -0.79
SREBF1-202ENST00000355815 ZNF575Q86XF7 245 aa10.1□□□□□ -0.79
SREBF1-202ENST00000355815 ATP5EP2Q5VTU8 51 aa10.09□□□□□ -0.79
SREBF1-202ENST00000355815 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
SREBF1-202ENST00000355815 SMIM1B2RUZ4 78 aa10.09□□□□□ -0.79
SREBF1-202ENST00000355815 CHCHD10Q8WYQ3 142 aaPredicted RBP10.09□□□□□ -0.79
SREBF1-202ENST00000355815 RMI2Q96E14 147 aa10.09□□□□□ -0.79
SREBF1-202ENST00000355815 C9orf116Q5BN46 136 aaPredicted RBP10.09□□□□□ -0.79
SREBF1-202ENST00000355815 A8MTW9 85 aa10.08□□□□□ -0.8
SREBF1-202ENST00000355815 CELSR2Q9HCU4 2923 aa10.08□□□□□ -0.8
SREBF1-202ENST00000355815 ITPR2Q14571 2701 aa10.08□□□□□ -0.8
SREBF1-202ENST00000355815 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
SREBF1-202ENST00000355815 REG3AQ06141 175 aa10.07□□□□□ -0.8
SREBF1-202ENST00000355815 INAFM1C9JVW0 142 aa10.07□□□□□ -0.8
SREBF1-202ENST00000355815 PDE6GP18545 87 aa10.06□□□□□ -0.8
SREBF1-202ENST00000355815 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
SREBF1-202ENST00000355815 MIFP14174 115 aa10.05□□□□□ -0.8
SREBF1-202ENST00000355815 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
SREBF1-202ENST00000355815 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
SREBF1-202ENST00000355815 Q8N3U1 123 aa10.05□□□□□ -0.8
SREBF1-202ENST00000355815 NTM-AS1Q6ZSK4 140 aa10.05□□□□□ -0.8
SREBF1-202ENST00000355815 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 WFDC13Q8IUB5 93 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 PSPHP1O15172 72 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 FAM222AQ5U5X8 452 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
SREBF1-202ENST00000355815 SETXQ7Z333 2677 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms