RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 NDUFS5O43920 106 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 CDH23Q9H251 3354 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 SERP2Q8N6R1 65 aa8.75□□□□□ -1.01
COLCA1-201ENST00000355430 LOC107984640A0A0U1RRK4 108 aa8.74□□□□□ -1.01
COLCA1-201ENST00000355430 CSDC2Q9Y534 153 aaKnown RBP8.74□□□□□ -1.01
COLCA1-201ENST00000355430 FAM19A5Q7Z5A7 132 aaPredicted RBP8.74□□□□□ -1.01
COLCA1-201ENST00000355430 IGLV5-52A0A0A0MRZ9 124 aa8.74□□□□□ -1.01
COLCA1-201ENST00000355430 TMEM258P61165 79 aa8.74□□□□□ -1.01
COLCA1-201ENST00000355430 Q9UF83 564 aa8.74□□□□□ -1.01
COLCA1-201ENST00000355430 FSHBP01225 129 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 DOPEY1Q5JWR5 2465 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 Q6JHZ5 121 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 SPATA3Q8NHX4 192 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 Q8IZM0 81 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 C11orf72Q8NBR9 251 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 KLK9Q2XQG4 91 aa8.73□□□□□ -1.01
COLCA1-201ENST00000355430 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
COLCA1-201ENST00000355430 SBSPONQ8IVN8 264 aa8.72□□□□□ -1.01
COLCA1-201ENST00000355430 ZNF706Q9Y5V0 76 aaPredicted RBP8.71□□□□□ -1.01
COLCA1-201ENST00000355430 A0A087WVE0 104 aa8.71□□□□□ -1.02
COLCA1-201ENST00000355430 Q6ZQY7 126 aa8.71□□□□□ -1.02
COLCA1-201ENST00000355430 FHL2Q14192 279 aa8.71□□□□□ -1.02
COLCA1-201ENST00000355430 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
COLCA1-201ENST00000355430 CCKP06307 115 aa8.7□□□□□ -1.02
COLCA1-201ENST00000355430 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
COLCA1-201ENST00000355430 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
COLCA1-201ENST00000355430 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
COLCA1-201ENST00000355430 WWC2-AS2Q96NR7 200 aa8.7□□□□□ -1.02
COLCA1-201ENST00000355430 DNAH14Q0VDD8 3507 aa8.7□□□□□ -1.02
COLCA1-201ENST00000355430 FN1P02751 2386 aaKnown RBP8.69□□□□□ -1.02
COLCA1-201ENST00000355430 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
COLCA1-201ENST00000355430 LINC00337Q8N6G1 96 aa8.69□□□□□ -1.02
COLCA1-201ENST00000355430 COX17Q14061 63 aa8.68□□□□□ -1.02
COLCA1-201ENST00000355430 Q8N814 137 aa8.68□□□□□ -1.02
COLCA1-201ENST00000355430 BPY2O14599 106 aa8.67□□□□□ -1.02
COLCA1-201ENST00000355430 NTM-AS1Q6ZSK4 140 aa8.67□□□□□ -1.02
COLCA1-201ENST00000355430 TRBV7-7A0A0K0K1E9 115 aa8.66□□□□□ -1.02
COLCA1-201ENST00000355430 MUC7Q8TAX7 377 aa8.66□□□□□ -1.02
COLCA1-201ENST00000355430 SNURFQ9Y675 71 aa8.66□□□□□ -1.02
COLCA1-201ENST00000355430 UNQ6190/PRO20217Q6UXQ8 127 aa8.66□□□□□ -1.02
COLCA1-201ENST00000355430 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.02
COLCA1-201ENST00000355430 CYSRT1A8MQ03 144 aa8.65□□□□□ -1.02
COLCA1-201ENST00000355430 LITAFQ99732 161 aa8.65□□□□□ -1.02
COLCA1-201ENST00000355430 F8P00451 2351 aa8.65□□□□□ -1.03
COLCA1-201ENST00000355430 IGLV5-45A0A087WSX0 123 aa8.64□□□□□ -1.03
COLCA1-201ENST00000355430 NDUFC2O95298 119 aa8.64□□□□□ -1.03
COLCA1-201ENST00000355430 MDFIQ99750 246 aa8.64□□□□□ -1.03
COLCA1-201ENST00000355430 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
COLCA1-201ENST00000355430 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
COLCA1-201ENST00000355430 C3orf84H3BNL1 204 aa8.63□□□□□ -1.03
COLCA1-201ENST00000355430 C5orf47Q569G3 176 aa8.62□□□□□ -1.03
COLCA1-201ENST00000355430 ZNF73O43830 326 aaPredicted RBP8.62□□□□□ -1.03
COLCA1-201ENST00000355430 IGKV2-28A0A075B6P5 120 aa8.61□□□□□ -1.03
COLCA1-201ENST00000355430 IGKV2D-28P01615 120 aa8.61□□□□□ -1.03
COLCA1-201ENST00000355430 ZNF575Q86XF7 245 aa8.61□□□□□ -1.03
COLCA1-201ENST00000355430 M0R378 163 aa8.6□□□□□ -1.03
COLCA1-201ENST00000355430 LYPD5Q6UWN5 251 aa8.6□□□□□ -1.03
COLCA1-201ENST00000355430 C6orf223Q8N319 242 aa8.6□□□□□ -1.03
COLCA1-201ENST00000355430 ANKRD17O75179 2603 aaKnown RBP8.6□□□□□ -1.03
COLCA1-201ENST00000355430 POLQO75417 2590 aa8.6□□□□□ -1.03
COLCA1-201ENST00000355430 PLAC8L1A1L4L8 177 aa8.6□□□□□ -1.03
COLCA1-201ENST00000355430 FLNBO75369 2602 aaKnown RBP8.6□□□□□ -1.03
COLCA1-201ENST00000355430 A0A096LNI7 61 aa8.59□□□□□ -1.03
COLCA1-201ENST00000355430 TRBV10-3A0A0K0K1G6 114 aa8.59□□□□□ -1.03
COLCA1-201ENST00000355430 MP68P56378 58 aa8.59□□□□□ -1.03
COLCA1-201ENST00000355430 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
COLCA1-201ENST00000355430 PRUNE2Q8WUY3 3088 aa8.59□□□□□ -1.04
COLCA1-201ENST00000355430 MPLKIPQ8TAP9 179 aa8.58□□□□□ -1.04
COLCA1-201ENST00000355430 A8MTW9 85 aa8.58□□□□□ -1.04
COLCA1-201ENST00000355430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
COLCA1-201ENST00000355430 MUC4Q99102 2169 aa8.58□□□□□ -1.04
COLCA1-201ENST00000355430 IGHV3OR16-9A0A0B4J2B5 98 aa8.58□□□□□ -1.04
COLCA1-201ENST00000355430 A0A1B0GUV1 79 aa8.58□□□□□ -1.04
COLCA1-201ENST00000355430 MTORP42345 2549 aa8.57□□□□□ -1.04
COLCA1-201ENST00000355430 F8WDY8 70 aa8.57□□□□□ -1.04
COLCA1-201ENST00000355430 BRK1Q8WUW1 75 aa8.57□□□□□ -1.04
COLCA1-201ENST00000355430 H0Y9J4 135 aa8.57□□□□□ -1.04
COLCA1-201ENST00000355430 EGFEM1PQ0D2K5 195 aa8.56□□□□□ -1.04
COLCA1-201ENST00000355430 DHRS4-AS1Q9P1J3 65 aa8.56□□□□□ -1.04
COLCA1-201ENST00000355430 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
COLCA1-201ENST00000355430 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
COLCA1-201ENST00000355430 CELA1Q9UNI1 258 aa8.55□□□□□ -1.04
COLCA1-201ENST00000355430 RPL37AP8A6NKH3 93 aa8.55□□□□□ -1.04
COLCA1-201ENST00000355430 TRAV7A0A075B6U4 112 aa8.54□□□□□ -1.04
COLCA1-201ENST00000355430 LINC00575Q6W349 94 aa8.54□□□□□ -1.04
COLCA1-201ENST00000355430 NDUFC2-KCTD14E9PQ53 114 aa8.54□□□□□ -1.04
COLCA1-201ENST00000355430 A0A096LNT2 108 aa8.53□□□□□ -1.04
COLCA1-201ENST00000355430 ACANP16112 2415 aa8.53□□□□□ -1.04
COLCA1-201ENST00000355430 H3BNG1 76 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 SZT2Q5T011 3432 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 LINC01561Q8N1V8 128 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 NDUFC1O43677 76 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 SMCR5Q8TEV8 140 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 TRIOO75962 3097 aa8.52□□□□□ -1.05
COLCA1-201ENST00000355430 SETD2Q9BYW2 2564 aaPredicted RBP8.51□□□□□ -1.05
COLCA1-201ENST00000355430 XIRP2A4UGR9 3374 aa8.51□□□□□ -1.05
COLCA1-201ENST00000355430 HRCT1Q6UXD1 115 aa8.51□□□□□ -1.05
COLCA1-201ENST00000355430 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms