RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 KHDC1LQ5JSQ8 128 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 SPATA25Q9BR10 227 aa3.73□□□□□ -1.81
CD47-201ENST00000355354 MAP6D1Q9H9H5 199 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 SMIM20Q8N5G0 67 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 GAGE7O76087 117 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 GAGE12FP0CL80 117 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 GAGE12GP0CL81 117 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 GAGE12IP0CL82 117 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 ZNF56Q15929 161 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 DEFB130BP0DP73 79 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 DEFB130AP0DP74 79 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 KIAA0087Q14695 138 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 DEFB114Q30KQ6 69 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 MAP1LC3AQ9H492 121 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 HSPB8Q9UJY1 196 aa3.72□□□□□ -1.81
CD47-201ENST00000355354 SDIM1Q6ZPB5 146 aa3.71□□□□□ -1.81
CD47-201ENST00000355354 SCXQ7RTU7 201 aa3.71□□□□□ -1.81
CD47-201ENST00000355354 OR10J6PQ8NGY7 276 aa3.71□□□□□ -1.81
CD47-201ENST00000355354 COPS9Q8WXC6 57 aa3.71□□□□□ -1.81
CD47-201ENST00000355354 DSCR8Q96T75 97 aa3.71□□□□□ -1.82
CD47-201ENST00000355354 SLC50A1Q9BRV3 221 aa3.71□□□□□ -1.82
CD47-201ENST00000355354 MRPS36P82909 103 aaKnown RBP3.71□□□□□ -1.82
CD47-201ENST00000355354 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
CD47-201ENST00000355354 SCGB1D4Q6XE38 83 aa3.71□□□□□ -1.82
CD47-201ENST00000355354 LINC00269Q8N2A0 174 aa3.71□□□□□ -1.82
CD47-201ENST00000355354 UNQ6190/PRO20217Q6UXQ8 127 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 TRBV6-1A0A0K0K1D8 114 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 LGALS9O00182 355 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 WWC2-AS2Q96NR7 200 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 FAM223BA6NKX1 122 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 C3orf84H3BNL1 204 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 CCL18P55774 89 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 SNRPD3P62318 126 aaKnown RBP3.7□□□□□ -1.82
CD47-201ENST00000355354 FAM223AQ8IWN6 122 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 MOB4Q9Y3A3 225 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 IGKV3D-7A0A0C4DH55 119 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 H3BUA1 57 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 M0R2P5 195 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 USMG5Q96IX5 58 aa3.7□□□□□ -1.82
CD47-201ENST00000355354 GEMIN7Q9H840 131 aaKnown RBP3.7□□□□□ -1.82
CD47-201ENST00000355354 SLC25A20O43772 301 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 HERVK_113P61574 105 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 HERV-K104P63124 156 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 PAPPA-AS1Q5QFB9 102 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 LINC01587Q99440 93 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 C14orf132Q9NPU4 83 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 X6R8D5 127 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 LYPD1Q8N2G4 141 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
CD47-201ENST00000355354 A8MWV9 139 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 ERC2-IT1O76042 136 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 SEC11AP67812 179 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 MIR7-3HGQ8N6C7 128 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 TINCRA0A1B0GVN0 87 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 GAGE6Q13070 117 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 C4orf3Q8WVX3 66 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 KRTAP4-5Q9BYR2 181 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 CDC42SE2Q9NRR3 84 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 RPL28P46779 137 aaKnown RBP3.68□□□□□ -1.82
CD47-201ENST00000355354 DEFB135Q30KP9 77 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 CFAP161Q6P656 301 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 LINC00308Q8TCZ7 52 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 TOMM7Q9P0U1 55 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 NDUFA12Q9UI09 145 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 PAX4O43316 350 aa3.68□□□□□ -1.82
CD47-201ENST00000355354 TRGV1A0A0A0MS02 117 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 TIRAPP58753 221 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 SMIM11BQ8TCY0 68 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 XCL1P47992 114 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 LINC00474Q9P2X8 69 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 PRO1854Q9UHT4 67 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 IGLV1-51P01701 117 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 FHL2Q14192 279 aa3.67□□□□□ -1.82
CD47-201ENST00000355354 SYNE1Q8NF91 8797 aaKnown RBP3.66□□□□□ -1.82
CD47-201ENST00000355354 PMVKQ15126 192 aa3.66□□□□□ -1.82
CD47-201ENST00000355354 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
CD47-201ENST00000355354 TRAV10A0A0B4J240 114 aa3.66□□□□□ -1.82
CD47-201ENST00000355354 CKS1BP61024 79 aa3.66□□□□□ -1.82
CD47-201ENST00000355354 IGLV5-39A0A0G2JS06 123 aa3.66□□□□□ -1.82
CD47-201ENST00000355354 FABP2P12104 132 aa3.66□□□□□ -1.82
CD47-201ENST00000355354 NDUFA4O00483 81 aa3.65□□□□□ -1.82
CD47-201ENST00000355354 PF4P02776 101 aa3.65□□□□□ -1.82
CD47-201ENST00000355354 WFDC10BQ8IUB3 73 aa3.65□□□□□ -1.82
CD47-201ENST00000355354 IL17DQ8TAD2 202 aa3.65□□□□□ -1.82
CD47-201ENST00000355354 RPL32P62910 135 aaKnown RBP3.65□□□□□ -1.82
CD47-201ENST00000355354 FAM19A5Q7Z5A7 132 aaPredicted RBP3.65□□□□□ -1.82
CD47-201ENST00000355354 LRCOL1A6NCL2 159 aa3.65□□□□□ -1.83
CD47-201ENST00000355354 C15orf53Q8NAA6 179 aa3.65□□□□□ -1.83
CD47-201ENST00000355354 VCX2Q9H322 139 aa3.65□□□□□ -1.83
CD47-201ENST00000355354 KRTAP26-1Q6PEX3 210 aa3.65□□□□□ -1.83
CD47-201ENST00000355354 LYPD5Q6UWN5 251 aa3.65□□□□□ -1.83
CD47-201ENST00000355354 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.83
CD47-201ENST00000355354 CXCL5P42830 114 aa3.64□□□□□ -1.83
CD47-201ENST00000355354 OR9G4Q8NGQ1 327 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms