RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 TINCRA0A1B0GVN0 87 aa12.59□□□□□ -0.39
HCFC1R1-202ENST00000354679 YPEL4Q96NS1 127 aa12.59□□□□□ -0.39
HCFC1R1-202ENST00000354679 LINC00614P0C842 121 aa12.58□□□□□ -0.4
HCFC1R1-202ENST00000354679 CKS1BP61024 79 aa12.58□□□□□ -0.4
HCFC1R1-202ENST00000354679 PMVKQ15126 192 aa12.58□□□□□ -0.4
HCFC1R1-202ENST00000354679 GAGE2EQ4V326 116 aa12.58□□□□□ -0.4
HCFC1R1-202ENST00000354679 C6orf226Q5I0X4 101 aa12.58□□□□□ -0.4
HCFC1R1-202ENST00000354679 GAGE2DQ9UEU5 116 aa12.58□□□□□ -0.4
HCFC1R1-202ENST00000354679 A0A096LNJ9 63 aa12.57□□□□□ -0.4
HCFC1R1-202ENST00000354679 IGLV5-45A0A087WSX0 123 aa12.56□□□□□ -0.4
HCFC1R1-202ENST00000354679 HBDP02042 147 aa12.56□□□□□ -0.4
HCFC1R1-202ENST00000354679 NDUFC2-KCTD14E9PQ53 114 aa12.55□□□□□ -0.4
HCFC1R1-202ENST00000354679 RAB5BP61020 215 aa12.55□□□□□ -0.4
HCFC1R1-202ENST00000354679 PHF5AQ7RTV0 110 aaKnown RBP12.55□□□□□ -0.4
HCFC1R1-202ENST00000354679 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
HCFC1R1-202ENST00000354679 SMIM1B2RUZ4 78 aa12.54□□□□□ -0.4
HCFC1R1-202ENST00000354679 PMCHL1Q16048 86 aa12.53□□□□□ -0.4
HCFC1R1-202ENST00000354679 PDZD11Q5EBL8 140 aa12.53□□□□□ -0.4
HCFC1R1-202ENST00000354679 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
HCFC1R1-202ENST00000354679 CXCL5P42830 114 aa12.52□□□□□ -0.41
HCFC1R1-202ENST00000354679 FAM19A5Q7Z5A7 132 aaPredicted RBP12.52□□□□□ -0.41
HCFC1R1-202ENST00000354679 F8VRH5 84 aa12.51□□□□□ -0.41
HCFC1R1-202ENST00000354679 NDUFA6P56556 154 aa12.51□□□□□ -0.41
HCFC1R1-202ENST00000354679 COX7B2Q8TF08 81 aa12.51□□□□□ -0.41
HCFC1R1-202ENST00000354679 SPINK8P0C7L1 97 aa12.5□□□□□ -0.41
HCFC1R1-202ENST00000354679 C9orf129Q5T035 196 aaKnown RBP12.5□□□□□ -0.41
HCFC1R1-202ENST00000354679 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
HCFC1R1-202ENST00000354679 PSORS1C2Q9UIG4 136 aa12.5□□□□□ -0.41
HCFC1R1-202ENST00000354679 H3BRM9 83 aa12.49□□□□□ -0.41
HCFC1R1-202ENST00000354679 IGLC3P0DOY3 106 aa12.49□□□□□ -0.41
HCFC1R1-202ENST00000354679 SPINK6Q6UWN8 80 aa12.49□□□□□ -0.41
HCFC1R1-202ENST00000354679 ATP5LO75964 103 aa12.48□□□□□ -0.41
HCFC1R1-202ENST00000354679 KRTAP7-1Q8IUC3 87 aa12.48□□□□□ -0.41
HCFC1R1-202ENST00000354679 M0QXV9 152 aa12.46□□□□□ -0.41
HCFC1R1-202ENST00000354679 MT1HL1P0DM35 61 aa12.46□□□□□ -0.41
HCFC1R1-202ENST00000354679 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
HCFC1R1-202ENST00000354679 CHCHD1Q96BP2 118 aaKnown RBP12.46□□□□□ -0.41
HCFC1R1-202ENST00000354679 TNXBP22105 4242 aa12.45□□□□□ -0.42
HCFC1R1-202ENST00000354679 C1orf137Q5JT78 98 aa12.45□□□□□ -0.42
HCFC1R1-202ENST00000354679 HMCN2Q8NDA2 5059 aa12.44□□□□□ -0.42
HCFC1R1-202ENST00000354679 ZNF22P17026 224 aaPredicted RBP12.44□□□□□ -0.42
HCFC1R1-202ENST00000354679 BAGE3Q86Y29 109 aa12.44□□□□□ -0.42
HCFC1R1-202ENST00000354679 XAGE1AQ9HD64 81 aa12.44□□□□□ -0.42
HCFC1R1-202ENST00000354679 KRTAP11-1Q8IUC1 163 aa12.43□□□□□ -0.42
HCFC1R1-202ENST00000354679 IGLV5-39A0A0G2JS06 123 aa12.42□□□□□ -0.42
HCFC1R1-202ENST00000354679 UBE2BP63146 152 aa12.42□□□□□ -0.42
HCFC1R1-202ENST00000354679 REG3GQ6UW15 175 aa12.42□□□□□ -0.42
HCFC1R1-202ENST00000354679 TRGC2P03986 189 aa12.41□□□□□ -0.42
HCFC1R1-202ENST00000354679 SERTAD4-AS1Q5TG53 156 aa12.41□□□□□ -0.42
HCFC1R1-202ENST00000354679 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
HCFC1R1-202ENST00000354679 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
HCFC1R1-202ENST00000354679 CHTOPQ9Y3Y2 248 aaKnown RBP12.39□□□□□ -0.43
HCFC1R1-202ENST00000354679 HSBP1O75506 76 aa12.38□□□□□ -0.43
HCFC1R1-202ENST00000354679 IGLV7-43P04211 117 aa12.38□□□□□ -0.43
HCFC1R1-202ENST00000354679 IFI27L1Q96BM0 104 aa12.38□□□□□ -0.43
HCFC1R1-202ENST00000354679 TRAV12-1A0A0B4J245 112 aa12.37□□□□□ -0.43
HCFC1R1-202ENST00000354679 TMEM170BQ5T4T1 132 aa12.37□□□□□ -0.43
HCFC1R1-202ENST00000354679 C22orf24Q9Y442 160 aa12.37□□□□□ -0.43
HCFC1R1-202ENST00000354679 FAM19A2Q8N3H0 131 aa12.36□□□□□ -0.43
HCFC1R1-202ENST00000354679 COLCA2A8K830 154 aa12.34□□□□□ -0.43
HCFC1R1-202ENST00000354679 ODF1Q14990 250 aa12.34□□□□□ -0.43
HCFC1R1-202ENST00000354679 LBHQ53QV2 105 aaPredicted RBP12.34□□□□□ -0.43
HCFC1R1-202ENST00000354679 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
HCFC1R1-202ENST00000354679 SERF1AO75920 110 aa12.32□□□□□ -0.44
HCFC1R1-202ENST00000354679 DIRC1Q969H9 104 aa12.32□□□□□ -0.44
HCFC1R1-202ENST00000354679 PFN2P35080 140 aa12.31□□□□□ -0.44
HCFC1R1-202ENST00000354679 LINC00310P59036 64 aa12.31□□□□□ -0.44
HCFC1R1-202ENST00000354679 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
HCFC1R1-202ENST00000354679 PLA2G2DQ9UNK4 145 aa12.31□□□□□ -0.44
HCFC1R1-202ENST00000354679 ERG28Q9UKR5 140 aa12.3□□□□□ -0.44
HCFC1R1-202ENST00000354679 TMEM223A0PJW6 202 aa12.29□□□□□ -0.44
HCFC1R1-202ENST00000354679 KRTAP10-8P60410 259 aa12.29□□□□□ -0.44
HCFC1R1-202ENST00000354679 SFTA2Q6UW10 78 aa12.29□□□□□ -0.44
HCFC1R1-202ENST00000354679 ZNF625Q96I27 306 aaPredicted RBP12.29□□□□□ -0.44
HCFC1R1-202ENST00000354679 H0Y9J4 135 aa12.28□□□□□ -0.44
HCFC1R1-202ENST00000354679 NUPR1O60356 82 aa12.28□□□□□ -0.44
HCFC1R1-202ENST00000354679 LEPROTL1O95214 131 aa12.28□□□□□ -0.44
HCFC1R1-202ENST00000354679 IGLV5-37A0A075B6J1 123 aa12.27□□□□□ -0.45
HCFC1R1-202ENST00000354679 H0Y8G0 127 aa12.27□□□□□ -0.45
HCFC1R1-202ENST00000354679 COX17Q14061 63 aa12.27□□□□□ -0.45
HCFC1R1-202ENST00000354679 NKAPP1Q8N9T2 125 aa12.26□□□□□ -0.45
HCFC1R1-202ENST00000354679 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
HCFC1R1-202ENST00000354679 SND1-IT1Q9HBX3 110 aa12.25□□□□□ -0.45
HCFC1R1-202ENST00000354679 SCO1O75880 301 aa12.24□□□□□ -0.45
HCFC1R1-202ENST00000354679 GAGE10A6NGK3 116 aa12.23□□□□□ -0.45
HCFC1R1-202ENST00000354679 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
HCFC1R1-202ENST00000354679 HSPB8Q9UJY1 196 aa12.23□□□□□ -0.45
HCFC1R1-202ENST00000354679 ZNF861PO60384 105 aa12.22□□□□□ -0.45
HCFC1R1-202ENST00000354679 FABP4P15090 132 aa12.22□□□□□ -0.45
HCFC1R1-202ENST00000354679 BCE1O60756 84 aa12.2□□□□□ -0.46
HCFC1R1-202ENST00000354679 VPREB1P12018 145 aa12.2□□□□□ -0.46
HCFC1R1-202ENST00000354679 LINC00158P58513 81 aa12.2□□□□□ -0.46
HCFC1R1-202ENST00000354679 KRTAP1-4P0C5Y4 121 aa12.18□□□□□ -0.46
HCFC1R1-202ENST00000354679 PLNP26678 52 aa12.18□□□□□ -0.46
HCFC1R1-202ENST00000354679 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
HCFC1R1-202ENST00000354679 PRR26Q8N8Z3 221 aa12.18□□□□□ -0.46
HCFC1R1-202ENST00000354679 A0A0U1RRA0 63 aa12.17□□□□□ -0.46
HCFC1R1-202ENST00000354679 IGKV2-28A0A075B6P5 120 aa12.16□□□□□ -0.46
HCFC1R1-202ENST00000354679 HIST1H2BKO60814 126 aa12.16□□□□□ -0.46
HCFC1R1-202ENST00000354679 IGKV2D-28P01615 120 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms