RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 USP17L23D6RBM5 183 aa9.79□□□□□ -0.84
LRP8-203ENST00000354412 TRAV25A0A0B4J276 109 aa9.78□□□□□ -0.84
LRP8-203ENST00000354412 NCR3O14931 201 aa9.78□□□□□ -0.84
LRP8-203ENST00000354412 PLA2G2AP14555 144 aa9.78□□□□□ -0.84
LRP8-203ENST00000354412 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.84
LRP8-203ENST00000354412 JMJD7-PLA2G4BH0Y9G9 81 aa9.77□□□□□ -0.84
LRP8-203ENST00000354412 CCKP06307 115 aa9.77□□□□□ -0.84
LRP8-203ENST00000354412 KHDC1LQ5JSQ8 128 aa9.77□□□□□ -0.84
LRP8-203ENST00000354412 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.84
LRP8-203ENST00000354412 A0A087WZ39 114 aa9.77□□□□□ -0.85
LRP8-203ENST00000354412 TRBV6-4A0A1B0GX49 114 aa9.77□□□□□ -0.85
LRP8-203ENST00000354412 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.85
LRP8-203ENST00000354412 KRTAP1-3Q8IUG1 177 aa9.77□□□□□ -0.85
LRP8-203ENST00000354412 PFN2P35080 140 aa9.76□□□□□ -0.85
LRP8-203ENST00000354412 ATP5EP2Q5VTU8 51 aa9.76□□□□□ -0.85
LRP8-203ENST00000354412 DPH3Q96FX2 82 aa9.76□□□□□ -0.85
LRP8-203ENST00000354412 UPK3BQ9BT76 320 aa9.76□□□□□ -0.85
LRP8-203ENST00000354412 IGKV3OR2-268A0A0C4DH90 116 aa9.76□□□□□ -0.85
LRP8-203ENST00000354412 NOP10Q9NPE3 64 aaKnown RBP9.76□□□□□ -0.85
LRP8-203ENST00000354412 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
LRP8-203ENST00000354412 A0A087WVE0 104 aa9.75□□□□□ -0.85
LRP8-203ENST00000354412 LY6G6DO95868 133 aa9.75□□□□□ -0.85
LRP8-203ENST00000354412 OTOGQ6ZRI0 2925 aa9.75□□□□□ -0.85
LRP8-203ENST00000354412 C6orf226Q5I0X4 101 aa9.74□□□□□ -0.85
LRP8-203ENST00000354412 TMEM86BQ8N661 226 aa9.74□□□□□ -0.85
LRP8-203ENST00000354412 J3QKU1 62 aa9.74□□□□□ -0.85
LRP8-203ENST00000354412 TMEM256-PLSCR3K7ERE1 68 aa9.73□□□□□ -0.85
LRP8-203ENST00000354412 SLPIP03973 132 aa9.73□□□□□ -0.85
LRP8-203ENST00000354412 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
LRP8-203ENST00000354412 CYSTM1Q9H1C7 97 aa9.73□□□□□ -0.85
LRP8-203ENST00000354412 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
LRP8-203ENST00000354412 IGLV4-60A0A075B6I1 120 aa9.72□□□□□ -0.85
LRP8-203ENST00000354412 TRGV4A0A0C4DH28 118 aa9.72□□□□□ -0.85
LRP8-203ENST00000354412 LINC00167Q96N53 147 aa9.72□□□□□ -0.85
LRP8-203ENST00000354412 ANK3Q12955 4377 aaKnown RBP9.72□□□□□ -0.85
LRP8-203ENST00000354412 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
LRP8-203ENST00000354412 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
LRP8-203ENST00000354412 SS18Q15532 418 aa9.7□□□□□ -0.86
LRP8-203ENST00000354412 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
LRP8-203ENST00000354412 TRBV10-3A0A0K0K1G6 114 aa9.7□□□□□ -0.86
LRP8-203ENST00000354412 LOC100131303A0A0U1RQF7 123 aa9.7□□□□□ -0.86
LRP8-203ENST00000354412 NDUFC2O95298 119 aa9.69□□□□□ -0.86
LRP8-203ENST00000354412 Q8N814 137 aa9.69□□□□□ -0.86
LRP8-203ENST00000354412 KIR2DL5BQ8NHK3 375 aa9.69□□□□□ -0.86
LRP8-203ENST00000354412 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
LRP8-203ENST00000354412 UBL5Q9BZL1 73 aa9.69□□□□□ -0.86
LRP8-203ENST00000354412 LINC00959A0A1B0GUT2 108 aa9.69□□□□□ -0.86
LRP8-203ENST00000354412 A0A1W2PRX2 142 aa9.68□□□□□ -0.86
LRP8-203ENST00000354412 LYPD5Q6UWN5 251 aa9.68□□□□□ -0.86
LRP8-203ENST00000354412 NOTCH3Q9UM47 2321 aa9.68□□□□□ -0.86
LRP8-203ENST00000354412 GHRHP01286 108 aa9.68□□□□□ -0.86
LRP8-203ENST00000354412 Q8IZM0 81 aa9.68□□□□□ -0.86
LRP8-203ENST00000354412 FLNBO75369 2602 aaKnown RBP9.67□□□□□ -0.86
LRP8-203ENST00000354412 DSCR8Q96T75 97 aa9.67□□□□□ -0.86
LRP8-203ENST00000354412 C2CD3Q4AC94 2353 aa9.67□□□□□ -0.86
LRP8-203ENST00000354412 PLAC8L1A1L4L8 177 aa9.67□□□□□ -0.86
LRP8-203ENST00000354412 HIVEP2P31629 2446 aa9.66□□□□□ -0.86
LRP8-203ENST00000354412 SMR3AQ99954 134 aa9.66□□□□□ -0.86
LRP8-203ENST00000354412 WIPF1O43516 503 aa9.65□□□□□ -0.86
LRP8-203ENST00000354412 JMJD1CQ15652 2540 aa9.65□□□□□ -0.87
LRP8-203ENST00000354412 C11orf68Q9H3H3 251 aaKnown RBP9.65□□□□□ -0.87
LRP8-203ENST00000354412 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
LRP8-203ENST00000354412 COX17Q14061 63 aa9.64□□□□□ -0.87
LRP8-203ENST00000354412 FHL2Q14192 279 aa9.64□□□□□ -0.87
LRP8-203ENST00000354412 ENHOQ6UWT2 76 aa9.64□□□□□ -0.87
LRP8-203ENST00000354412 BCE1O60756 84 aa9.64□□□□□ -0.87
LRP8-203ENST00000354412 HILS1P60008 231 aa9.64□□□□□ -0.87
LRP8-203ENST00000354412 GIG44P09565 113 aaPredicted RBP9.63□□□□□ -0.87
LRP8-203ENST00000354412 XCL1P47992 114 aa9.63□□□□□ -0.87
LRP8-203ENST00000354412 A0A1B0GUV1 79 aa9.63□□□□□ -0.87
LRP8-203ENST00000354412 CCL24O00175 119 aa9.63□□□□□ -0.87
LRP8-203ENST00000354412 FN1P02751 2386 aaKnown RBP9.63□□□□□ -0.87
LRP8-203ENST00000354412 NANOS2P60321 138 aaKnown RBP9.62□□□□□ -0.87
LRP8-203ENST00000354412 DNAJC9-AS1A6NH13 148 aa9.62□□□□□ -0.87
LRP8-203ENST00000354412 FAM19A1Q7Z5A9 133 aa9.62□□□□□ -0.87
LRP8-203ENST00000354412 WFDC9Q8NEX5 89 aa9.61□□□□□ -0.87
LRP8-203ENST00000354412 RBM3P98179 157 aaKnown RBP9.6□□□□□ -0.87
LRP8-203ENST00000354412 HIVEP1P15822 2718 aa9.6□□□□□ -0.87
LRP8-203ENST00000354412 OXTP01178 125 aa9.6□□□□□ -0.87
LRP8-203ENST00000354412 ESM1Q9NQ30 184 aa9.6□□□□□ -0.87
LRP8-203ENST00000354412 C20orf197Q8N268 126 aa9.59□□□□□ -0.87
LRP8-203ENST00000354412 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
LRP8-203ENST00000354412 RPL35AP18077 110 aaKnown RBP9.59□□□□□ -0.87
LRP8-203ENST00000354412 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
LRP8-203ENST00000354412 KRTAP1-1Q07627 177 aa9.59□□□□□ -0.87
LRP8-203ENST00000354412 CSNK1G2-AS1Q8NCQ2 148 aa9.58□□□□□ -0.88
LRP8-203ENST00000354412 TRAV7A0A075B6U4 112 aa9.58□□□□□ -0.88
LRP8-203ENST00000354412 C6orf99Q4VX62 202 aa9.58□□□□□ -0.88
LRP8-203ENST00000354412 VWFP04275 2813 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 LOC110117498A0A087WWA1 95 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 H3BQ85 93 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 C4orf26Q17RF5 130 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 Q5XG85 94 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 Q6ZQT0 140 aa9.57□□□□□ -0.88
LRP8-203ENST00000354412 NSD1Q96L73 2696 aaPredicted RBP9.56□□□□□ -0.88
LRP8-203ENST00000354412 IGHV4-28A0A0C4DH34 117 aa9.56□□□□□ -0.88
LRP8-203ENST00000354412 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
LRP8-203ENST00000354412 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms