RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZFHX3Q15911 3703 aa5.38□□□□□ -1.55
BRCA1-201ENST00000352993 MSMBP08118 114 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 SCXQ7RTU7 201 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 Q8N814 137 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 USP9YO00507 2555 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-201ENST00000352993 IGLV4-60A0A075B6I1 120 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 AVPP01185 164 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 TRAV7A0A075B6U4 112 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 TRBV10-1A0A0K0K1A3 114 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 JMJD1CQ15652 2540 aa5.37□□□□□ -1.55
BRCA1-201ENST00000352993 H7BZZ5 65 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 KRTAP21-3Q3LHN1 58 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 TLN2Q9Y4G6 2542 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 IGHV4-30-2A0A087WSY4 118 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 SS18Q15532 418 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 MPLKIPQ8TAP9 179 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 CCL19Q99731 98 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 C6orf99Q4VX62 202 aa5.36□□□□□ -1.55
BRCA1-201ENST00000352993 FN1P02751 2386 aaKnown RBP5.35□□□□□ -1.55
BRCA1-201ENST00000352993 MAPK1IP1LQ8NDC0 245 aa5.35□□□□□ -1.55
BRCA1-201ENST00000352993 SETD2Q9BYW2 2564 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-201ENST00000352993 FAM19A3Q7Z5A8 133 aa5.35□□□□□ -1.55
BRCA1-201ENST00000352993 C11orf44Q8N8P7 122 aa5.35□□□□□ -1.55
BRCA1-201ENST00000352993 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
BRCA1-201ENST00000352993 CHD8Q9HCK8 2581 aa5.35□□□□□ -1.55
BRCA1-201ENST00000352993 MYO18BQ8IUG5 2567 aa5.35□□□□□ -1.55
BRCA1-201ENST00000352993 USP9XQ93008 2570 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-201ENST00000352993 A8MTW9 85 aa5.34□□□□□ -1.55
BRCA1-201ENST00000352993 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
BRCA1-201ENST00000352993 C19orf84I3L1E1 186 aa5.34□□□□□ -1.55
BRCA1-201ENST00000352993 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.55
BRCA1-201ENST00000352993 LINC01547P58512 204 aaPredicted RBP5.34□□□□□ -1.56
BRCA1-201ENST00000352993 A0A1W2PRX2 142 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 CUBNO60494 3623 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 SONP18583 2426 aaKnown RBP5.33□□□□□ -1.56
BRCA1-201ENST00000352993 TRBV7-6A0A0J9YX20 115 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 B4DSR2 109 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 A0A087WZ39 114 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 A0A096LPF7 62 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 TRBV10-3A0A0K0K1G6 114 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 Q8N3U1 123 aa5.33□□□□□ -1.56
BRCA1-201ENST00000352993 M0R2N4 97 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 LYPD5Q6UWN5 251 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 Q6ZVQ6 151 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-201ENST00000352993 IGLV10-54A0A075B6I4 117 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 TRBV6-8A0A0A6YYG3 113 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 LINC00959A0A1B0GUT2 108 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 DEFB130BP0DP73 79 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 DEFB130AP0DP74 79 aa5.32□□□□□ -1.56
BRCA1-201ENST00000352993 DEFB114Q30KQ6 69 aa5.31□□□□□ -1.56
BRCA1-201ENST00000352993 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-201ENST00000352993 TM2D3Q9BRN9 247 aa5.31□□□□□ -1.56
BRCA1-201ENST00000352993 CRYBG3Q68DQ2 2970 aa5.31□□□□□ -1.56
BRCA1-201ENST00000352993 DAD1P61803 113 aa5.31□□□□□ -1.56
BRCA1-201ENST00000352993 C1orf195Q5TG92 126 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 A0A096LNT2 108 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 LY6G6DO95868 133 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 MIFP14174 115 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 ODF3L2Q3SX64 289 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 Q6ZQT0 140 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 Q6ZQY7 126 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 LINC00269Q8N2A0 174 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
BRCA1-201ENST00000352993 ZNF561-AS1K7EIQ3 104 aa5.29□□□□□ -1.56
BRCA1-201ENST00000352993 V9GYY9 64 aa5.29□□□□□ -1.56
BRCA1-201ENST00000352993 NANOS2P60321 138 aaKnown RBP5.29□□□□□ -1.56
BRCA1-201ENST00000352993 POLQO75417 2590 aa5.29□□□□□ -1.56
BRCA1-201ENST00000352993 LINC00482Q8N8I6 264 aa5.29□□□□□ -1.56
BRCA1-201ENST00000352993 NREPQ16612 68 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 ZNF702PQ9H963 129 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 LINC00575Q6W349 94 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 GNLYP22749 145 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 WFDC10AQ9H1F0 79 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 PDZD2O15018 2839 aa5.28□□□□□ -1.56
BRCA1-201ENST00000352993 NDUFC1O43677 76 aa5.27□□□□□ -1.57
BRCA1-201ENST00000352993 Q8N9L7 120 aa5.27□□□□□ -1.57
BRCA1-201ENST00000352993 Q8IZM0 81 aa5.27□□□□□ -1.57
BRCA1-201ENST00000352993 GYPEP15421 78 aa5.27□□□□□ -1.57
BRCA1-201ENST00000352993 TMEM254Q8TBM7 123 aa5.27□□□□□ -1.57
BRCA1-201ENST00000352993 LRCOL1A6NCL2 159 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 BPY2O14599 106 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 C16orf74Q96GX8 76 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 C16orf95Q9H693 158 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 BCE1O60756 84 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 ZFYVE26Q68DK2 2539 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 ANGP03950 147 aaKnown RBP5.26□□□□□ -1.57
BRCA1-201ENST00000352993 LINC01356Q8N9X3 169 aa5.26□□□□□ -1.57
BRCA1-201ENST00000352993 SEC61GP60059 68 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 HELZ2Q9BYK8 2649 aaKnown RBP5.25□□□□□ -1.57
BRCA1-201ENST00000352993 FUSP35637 526 aaKnown RBP eCLIP5.25□□□□□ -1.57
BRCA1-201ENST00000352993 NAV2Q8IVL1 2488 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 SPATA3Q8NHX4 192 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 MUC7Q8TAX7 377 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 LOC110117498A0A087WWA1 95 aa5.25□□□□□ -1.57
BRCA1-201ENST00000352993 EPM2AB3EWF7 344 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms