RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 BCE1O60756 84 aa7.52□□□□□ -1.21
CAPN3-203ENST00000349748 C6orf223Q8N319 242 aa7.52□□□□□ -1.21
CAPN3-203ENST00000349748 JMJD7-PLA2G4BH0Y9G9 81 aa7.52□□□□□ -1.21
CAPN3-203ENST00000349748 CCL18P55774 89 aa7.52□□□□□ -1.21
CAPN3-203ENST00000349748 SPINK13Q1W4C9 94 aa7.52□□□□□ -1.21
CAPN3-203ENST00000349748 SCXQ7RTU7 201 aa7.52□□□□□ -1.21
CAPN3-203ENST00000349748 LINC00158P58513 81 aa7.51□□□□□ -1.21
CAPN3-203ENST00000349748 DAD1P61803 113 aa7.51□□□□□ -1.21
CAPN3-203ENST00000349748 TMEM254Q8TBM7 123 aa7.51□□□□□ -1.21
CAPN3-203ENST00000349748 IGHV3-11P01762 117 aa7.5□□□□□ -1.21
CAPN3-203ENST00000349748 RHPN1-AS1Q9BWJ2 59 aa7.5□□□□□ -1.21
CAPN3-203ENST00000349748 C11orf68Q9H3H3 251 aaKnown RBP7.5□□□□□ -1.21
CAPN3-203ENST00000349748 TOMM7Q9P0U1 55 aa7.5□□□□□ -1.21
CAPN3-203ENST00000349748 C1orf158Q8N1D5 194 aa7.5□□□□□ -1.21
CAPN3-203ENST00000349748 K7EQG2 157 aa7.49□□□□□ -1.21
CAPN3-203ENST00000349748 NREPQ16612 68 aa7.49□□□□□ -1.21
CAPN3-203ENST00000349748 Q6ZVQ6 151 aa7.49□□□□□ -1.21
CAPN3-203ENST00000349748 CCDC168Q8NDH2 2452 aa7.49□□□□□ -1.21
CAPN3-203ENST00000349748 NAV2Q8IVL1 2488 aa7.48□□□□□ -1.21
CAPN3-203ENST00000349748 A8MU10 97 aa7.48□□□□□ -1.21
CAPN3-203ENST00000349748 PSPHP1O15172 72 aa7.48□□□□□ -1.21
CAPN3-203ENST00000349748 FUSP35637 526 aaKnown RBP eCLIP7.48□□□□□ -1.21
CAPN3-203ENST00000349748 CREBBPQ92793 2442 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 BAHCC1Q9P281 2608 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 ZFP36P26651 326 aaKnown RBP7.47□□□□□ -1.21
CAPN3-203ENST00000349748 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 ZNF561-AS1K7EIQ3 104 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 C19orf54Q5BKX5 351 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 C11orf71Q6IPW1 123 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 Q8N814 137 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 CCL19Q99731 98 aa7.47□□□□□ -1.21
CAPN3-203ENST00000349748 TMEM256-PLSCR3K7ERE1 68 aa7.46□□□□□ -1.21
CAPN3-203ENST00000349748 KRTAP10-9P60411 292 aa7.46□□□□□ -1.21
CAPN3-203ENST00000349748 Q6ZTC4 211 aa7.46□□□□□ -1.21
CAPN3-203ENST00000349748 Q6ZQT0 140 aa7.46□□□□□ -1.22
CAPN3-203ENST00000349748 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
CAPN3-203ENST00000349748 A0A096LNT2 108 aa7.45□□□□□ -1.22
CAPN3-203ENST00000349748 NDUFA4O00483 81 aa7.45□□□□□ -1.22
CAPN3-203ENST00000349748 Q6ZRP5 223 aa7.45□□□□□ -1.22
CAPN3-203ENST00000349748 FBN2P35556 2912 aa7.45□□□□□ -1.22
CAPN3-203ENST00000349748 KLK9Q2XQG4 91 aa7.45□□□□□ -1.22
CAPN3-203ENST00000349748 MRPL55Q7Z7F7 128 aaKnown RBP7.45□□□□□ -1.22
CAPN3-203ENST00000349748 PRYO14603 147 aa7.44□□□□□ -1.22
CAPN3-203ENST00000349748 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
CAPN3-203ENST00000349748 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
CAPN3-203ENST00000349748 COX7B2Q8TF08 81 aa7.44□□□□□ -1.22
CAPN3-203ENST00000349748 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
CAPN3-203ENST00000349748 BPY2O14599 106 aa7.43□□□□□ -1.22
CAPN3-203ENST00000349748 UNC79Q9P2D8 2635 aa7.43□□□□□ -1.22
CAPN3-203ENST00000349748 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
CAPN3-203ENST00000349748 RBM12B-AS1Q9P1G2 102 aa7.43□□□□□ -1.22
CAPN3-203ENST00000349748 TRBV6-4A0A1B0GX49 114 aa7.42□□□□□ -1.22
CAPN3-203ENST00000349748 Q8N9L7 120 aa7.42□□□□□ -1.22
CAPN3-203ENST00000349748 LINC01356Q8N9X3 169 aa7.42□□□□□ -1.22
CAPN3-203ENST00000349748 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
CAPN3-203ENST00000349748 CSPG4Q6UVK1 2322 aa7.41□□□□□ -1.22
CAPN3-203ENST00000349748 LAMTOR3Q9UHA4 124 aa7.41□□□□□ -1.22
CAPN3-203ENST00000349748 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
CAPN3-203ENST00000349748 MINOS1-NBL1R4GNA1 71 aa7.41□□□□□ -1.22
CAPN3-203ENST00000349748 SETXQ7Z333 2677 aaKnown RBP7.41□□□□□ -1.22
CAPN3-203ENST00000349748 NANOS2P60321 138 aaKnown RBP7.41□□□□□ -1.22
CAPN3-203ENST00000349748 MAPK1IP1LQ8NDC0 245 aa7.41□□□□□ -1.22
CAPN3-203ENST00000349748 ANKRD17O75179 2603 aaKnown RBP7.4□□□□□ -1.22
CAPN3-203ENST00000349748 APCP25054 2843 aa7.4□□□□□ -1.22
CAPN3-203ENST00000349748 CXCL6P80162 114 aa7.4□□□□□ -1.22
CAPN3-203ENST00000349748 NTM-AS1Q6ZSK4 140 aa7.4□□□□□ -1.22
CAPN3-203ENST00000349748 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
CAPN3-203ENST00000349748 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.4□□□□□ -1.226e-8■■■■□ 22
CAPN3-203ENST00000349748 ABCA2Q9BZC7 2435 aa7.4□□□□□ -1.23
CAPN3-203ENST00000349748 hDV103S1A0JD37 113 aa7.4□□□□□ -1.23
CAPN3-203ENST00000349748 LY6G6DO95868 133 aa7.4□□□□□ -1.23
CAPN3-203ENST00000349748 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
CAPN3-203ENST00000349748 C11orf45Q8TAV5 145 aa7.39□□□□□ -1.23
CAPN3-203ENST00000349748 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
CAPN3-203ENST00000349748 A8MTW9 85 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 IGHV4-30-2A0A087WSY4 118 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 PRB2P02812 416 aaPredicted RBP7.38□□□□□ -1.23
CAPN3-203ENST00000349748 Q1T7F1 81 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 IGHV3-53P01767 116 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 CD164L2Q6UWJ8 174 aa7.38□□□□□ -1.23
CAPN3-203ENST00000349748 IGHV4-61A0A0C4DH41 118 aa7.37□□□□□ -1.23
CAPN3-203ENST00000349748 LOC110117498A0A087WWA1 95 aa7.37□□□□□ -1.23
CAPN3-203ENST00000349748 K7EQD1 137 aa7.37□□□□□ -1.23
CAPN3-203ENST00000349748 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
CAPN3-203ENST00000349748 A8MUN3 132 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 STHQ8IWL8 128 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 MYO9AB2RTY4 2548 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 LINC01006Q8NI28 216 aa7.35□□□□□ -1.23
CAPN3-203ENST00000349748 LMO4P61968 165 aa7.34□□□□□ -1.23
CAPN3-203ENST00000349748 NOTCH3Q9UM47 2321 aa7.34□□□□□ -1.23
CAPN3-203ENST00000349748 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
CAPN3-203ENST00000349748 ACANP16112 2415 aa7.34□□□□□ -1.23
CAPN3-203ENST00000349748 ZANQ9Y493 2812 aa7.34□□□□□ -1.23
CAPN3-203ENST00000349748 SYCNQ0VAF6 134 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms