RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PAX4O43316 350 aa12.57□□□□□ -0.4
PTP4A3-202ENST00000349124 DEFB4AO15263 64 aa12.56□□□□□ -0.4
PTP4A3-202ENST00000349124 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
PTP4A3-202ENST00000349124 OR13C6PQ8NH95 151 aa12.56□□□□□ -0.4
PTP4A3-202ENST00000349124 UNC79Q9P2D8 2635 aa12.56□□□□□ -0.4
PTP4A3-202ENST00000349124 MRPL23Q16540 153 aaKnown RBP12.56□□□□□ -0.4
PTP4A3-202ENST00000349124 FAM110AQ9BQ89 295 aa12.56□□□□□ -0.4
PTP4A3-202ENST00000349124 MALP21145 153 aa12.55□□□□□ -0.4
PTP4A3-202ENST00000349124 PRR3P79522 188 aaKnown RBP12.55□□□□□ -0.4
PTP4A3-202ENST00000349124 Q8N3U1 123 aa12.55□□□□□ -0.4
PTP4A3-202ENST00000349124 SLPIP03973 132 aa12.55□□□□□ -0.4
PTP4A3-202ENST00000349124 GAGE2AQ6NT46 116 aa12.54□□□□□ -0.4
PTP4A3-202ENST00000349124 C3orf56Q8N813 242 aa12.54□□□□□ -0.4
PTP4A3-202ENST00000349124 PF4P02776 101 aa12.54□□□□□ -0.4
PTP4A3-202ENST00000349124 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
PTP4A3-202ENST00000349124 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
PTP4A3-202ENST00000349124 TRBV7-7A0A0K0K1E9 115 aa12.53□□□□□ -0.4
PTP4A3-202ENST00000349124 FAM222AQ5U5X8 452 aa12.53□□□□□ -0.4
PTP4A3-202ENST00000349124 LECT2O14960 151 aa12.52□□□□□ -0.41
PTP4A3-202ENST00000349124 FAM236AA0A1B0GUQ0 79 aa12.51□□□□□ -0.41
PTP4A3-202ENST00000349124 FAM236BA0A1B0GV22 79 aa12.51□□□□□ -0.41
PTP4A3-202ENST00000349124 ACYP1P07311 99 aa12.51□□□□□ -0.41
PTP4A3-202ENST00000349124 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
PTP4A3-202ENST00000349124 X6R8D5 127 aa12.51□□□□□ -0.41
PTP4A3-202ENST00000349124 TENM1Q9UKZ4 2725 aa12.5□□□□□ -0.41
PTP4A3-202ENST00000349124 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
PTP4A3-202ENST00000349124 IGLV10-54A0A075B6I4 117 aa12.5□□□□□ -0.41
PTP4A3-202ENST00000349124 DNAL4O96015 105 aa12.5□□□□□ -0.41
PTP4A3-202ENST00000349124 HILS1P60008 231 aa12.48□□□□□ -0.41
PTP4A3-202ENST00000349124 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
PTP4A3-202ENST00000349124 LINC00643Q86TS7 51 aa12.48□□□□□ -0.41
PTP4A3-202ENST00000349124 TRRAPQ9Y4A5 3859 aa12.48□□□□□ -0.41
PTP4A3-202ENST00000349124 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
PTP4A3-202ENST00000349124 HECTD1Q9ULT8 2610 aa12.47□□□□□ -0.41
PTP4A3-202ENST00000349124 NCR3O14931 201 aa12.47□□□□□ -0.41
PTP4A3-202ENST00000349124 SS18Q15532 418 aa12.47□□□□□ -0.41
PTP4A3-202ENST00000349124 C9orf116Q5BN46 136 aaPredicted RBP12.47□□□□□ -0.41
PTP4A3-202ENST00000349124 LINC00612Q8N6U2 182 aa12.46□□□□□ -0.41
PTP4A3-202ENST00000349124 OTOGQ6ZRI0 2925 aa12.46□□□□□ -0.41
PTP4A3-202ENST00000349124 SDIM1Q6ZPB5 146 aa12.46□□□□□ -0.42
PTP4A3-202ENST00000349124 PRO0255Q9UI72 69 aa12.45□□□□□ -0.42
PTP4A3-202ENST00000349124 INAFM2P0DMQ5 153 aa12.44□□□□□ -0.42
PTP4A3-202ENST00000349124 A0A1B0GUV1 79 aa12.44□□□□□ -0.42
PTP4A3-202ENST00000349124 H0YGX0 51 aa12.44□□□□□ -0.42
PTP4A3-202ENST00000349124 DEFB135Q30KP9 77 aa12.44□□□□□ -0.42
PTP4A3-202ENST00000349124 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
PTP4A3-202ENST00000349124 Q8IZM0 81 aa12.42□□□□□ -0.42
PTP4A3-202ENST00000349124 KIAA0087Q14695 138 aa12.41□□□□□ -0.42
PTP4A3-202ENST00000349124 Q8NDZ9 215 aa12.41□□□□□ -0.42
PTP4A3-202ENST00000349124 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
PTP4A3-202ENST00000349124 ANGP03950 147 aaKnown RBP12.4□□□□□ -0.42
PTP4A3-202ENST00000349124 IMUPQ9GZP8 106 aa12.4□□□□□ -0.42
PTP4A3-202ENST00000349124 LINC00846Q9NV44 126 aa12.4□□□□□ -0.42
PTP4A3-202ENST00000349124 ATRQ13535 2644 aa12.4□□□□□ -0.42
PTP4A3-202ENST00000349124 CHCHD10Q8WYQ3 142 aaPredicted RBP12.4□□□□□ -0.42
PTP4A3-202ENST00000349124 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
PTP4A3-202ENST00000349124 LY6G6DO95868 133 aa12.39□□□□□ -0.43
PTP4A3-202ENST00000349124 OBSCN-AS1Q96MR7 158 aa12.38□□□□□ -0.43
PTP4A3-202ENST00000349124 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
PTP4A3-202ENST00000349124 CELA1Q9UNI1 258 aa12.37□□□□□ -0.43
PTP4A3-202ENST00000349124 KLK5Q9Y337 293 aaPredicted RBP12.37□□□□□ -0.43
PTP4A3-202ENST00000349124 REG3AQ06141 175 aa12.36□□□□□ -0.43
PTP4A3-202ENST00000349124 CD164L2Q6UWJ8 174 aa12.36□□□□□ -0.43
PTP4A3-202ENST00000349124 HTN3P15516 51 aa12.36□□□□□ -0.43
PTP4A3-202ENST00000349124 C10orf25Q5T742 122 aa12.36□□□□□ -0.43
PTP4A3-202ENST00000349124 IGHV4-28A0A0C4DH34 117 aa12.35□□□□□ -0.43
PTP4A3-202ENST00000349124 CXCL5P42830 114 aa12.34□□□□□ -0.43
PTP4A3-202ENST00000349124 ORMDL1Q9P0S3 153 aa12.34□□□□□ -0.43
PTP4A3-202ENST00000349124 A0A087WVE0 104 aa12.33□□□□□ -0.44
PTP4A3-202ENST00000349124 SMIM9A6NGZ8 99 aa12.33□□□□□ -0.44
PTP4A3-202ENST00000349124 UNQ6190/PRO20217Q6UXQ8 127 aa12.33□□□□□ -0.44
PTP4A3-202ENST00000349124 SMIM20Q8N5G0 67 aa12.33□□□□□ -0.44
PTP4A3-202ENST00000349124 DAD1P61803 113 aa12.32□□□□□ -0.44
PTP4A3-202ENST00000349124 HIVEP1P15822 2718 aa12.32□□□□□ -0.44
PTP4A3-202ENST00000349124 Q8N814 137 aa12.31□□□□□ -0.44
PTP4A3-202ENST00000349124 LYRM9A8MSI8 78 aa12.31□□□□□ -0.44
PTP4A3-202ENST00000349124 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
PTP4A3-202ENST00000349124 LINC01561Q8N1V8 128 aa12.3□□□□□ -0.44
PTP4A3-202ENST00000349124 TEP1Q99973 2627 aaKnown RBP12.3□□□□□ -0.44
PTP4A3-202ENST00000349124 TMEM126AQ9H061 195 aa12.28□□□□□ -0.44
PTP4A3-202ENST00000349124 NSD1Q96L73 2696 aaPredicted RBP12.28□□□□□ -0.44
PTP4A3-202ENST00000349124 C3orf22Q8N5N4 141 aa12.28□□□□□ -0.44
PTP4A3-202ENST00000349124 PKD1L1Q8TDX9 2849 aa12.27□□□□□ -0.44
PTP4A3-202ENST00000349124 C9orf153Q5TBE3 101 aa12.27□□□□□ -0.44
PTP4A3-202ENST00000349124 KLK12Q9UKR0 248 aa12.27□□□□□ -0.44
PTP4A3-202ENST00000349124 INAFM1C9JVW0 142 aa12.26□□□□□ -0.45
PTP4A3-202ENST00000349124 Q8NAQ8 132 aa12.26□□□□□ -0.45
PTP4A3-202ENST00000349124 NDUFC2O95298 119 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 C9orf66Q5T8R8 295 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 WFDC9Q8NEX5 89 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 CYSRT1A8MQ03 144 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 COX17Q14061 63 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 C2orf48Q96LS8 159 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 LINC00167Q96N53 147 aa12.25□□□□□ -0.45
PTP4A3-202ENST00000349124 J3QKU1 62 aa12.24□□□□□ -0.45
PTP4A3-202ENST00000349124 CCKP06307 115 aa12.24□□□□□ -0.45
PTP4A3-202ENST00000349124 SPAG11BQ08648 103 aa12.24□□□□□ -0.45
PTP4A3-202ENST00000349124 S100A7L2Q5SY68 101 aa12.24□□□□□ -0.45
PTP4A3-202ENST00000349124 HIST1H4AP62805 103 aaKnown RBP12.24□□□□□ -0.45
PTP4A3-202ENST00000349124 UQCRQO14949 82 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms