RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TOMM7Q9P0U1 55 aa4.18□□□□□ -1.74
CLCN3-201ENST00000347613 TRGV4A0A0C4DH28 118 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 TIMM17BO60830 172 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 LY6G6DO95868 133 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 SMCR5Q8TEV8 140 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 LINC01600Q96MT4 127 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 MAST4O15021 2626 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 TRBV6-4A0A1B0GX49 114 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 MALP21145 153 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 MIR7-3HGQ8N6C7 128 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 CELA1Q9UNI1 258 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 TTC32Q5I0X7 151 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 MRAPQ8TCY5 172 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 RNF183Q96D59 192 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 F8P00451 2351 aa4.17□□□□□ -1.74
CLCN3-201ENST00000347613 J3QR89 54 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 A0A087WYN8 130 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 INAFM1C9JVW0 142 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 PFN2P35080 140 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 C9orf116Q5BN46 136 aaPredicted RBP4.16□□□□□ -1.74
CLCN3-201ENST00000347613 MEIG1Q5JSS6 88 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 HUWE1Q7Z6Z7 4374 aaKnown RBP4.16□□□□□ -1.74
CLCN3-201ENST00000347613 LINC00959A0A1B0GUT2 108 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 GYPEP15421 78 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 CCL18P55774 89 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 LINC00526Q96FQ7 95 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 CHCHD5Q9BSY4 110 aa4.16□□□□□ -1.74
CLCN3-201ENST00000347613 UBE2L6O14933 153 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 ATP5G1P05496 136 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 XCL1P47992 114 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 LINC00612Q8N6U2 182 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 COX7B2Q8TF08 81 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 NOTCH1P46531 2555 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 NBEAL1Q6ZS30 2694 aa4.15□□□□□ -1.74
CLCN3-201ENST00000347613 IGLV10-54A0A075B6I4 117 aa4.15□□□□□ -1.75
CLCN3-201ENST00000347613 DEFB135Q30KP9 77 aa4.15□□□□□ -1.75
CLCN3-201ENST00000347613 FAM222AQ5U5X8 452 aa4.15□□□□□ -1.75
CLCN3-201ENST00000347613 UBE2WQ96B02 151 aa4.15□□□□□ -1.75
CLCN3-201ENST00000347613 SLPIP03973 132 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 IFITM1P13164 125 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 COX7A2LO14548 114 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 NANOS2P60321 138 aaKnown RBP4.14□□□□□ -1.75
CLCN3-201ENST00000347613 LYRM7Q5U5X0 104 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 A0A087WZ39 114 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 C6orf223Q8N319 242 aa4.14□□□□□ -1.75
CLCN3-201ENST00000347613 DEFB121Q5J5C9 76 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 C15orf53Q8NAA6 179 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 TMEM262E9PQX1 116 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 KIAA0087Q14695 138 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 C4orf26Q17RF5 130 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 LINC00269Q8N2A0 174 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 SND1-IT1Q9HBX3 110 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 TENM2Q9NT68 2774 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 LINC00158P58513 81 aa4.13□□□□□ -1.75
CLCN3-201ENST00000347613 CIRBPQ14011 172 aaKnown RBP4.13□□□□□ -1.75
CLCN3-201ENST00000347613 SS18Q15532 418 aa4.12□□□□□ -1.75
CLCN3-201ENST00000347613 IGHV4-28A0A0C4DH34 117 aa4.12□□□□□ -1.75
CLCN3-201ENST00000347613 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
CLCN3-201ENST00000347613 H3BT86 120 aa4.11□□□□□ -1.75
CLCN3-201ENST00000347613 BAALC-AS2P0C853 105 aa4.11□□□□□ -1.75
CLCN3-201ENST00000347613 RPL28P46779 137 aaKnown RBP4.11□□□□□ -1.75
CLCN3-201ENST00000347613 Q8NAQ8 132 aa4.11□□□□□ -1.75
CLCN3-201ENST00000347613 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
CLCN3-201ENST00000347613 COX6CP09669 75 aa4.1□□□□□ -1.75
CLCN3-201ENST00000347613 RETNQ9HD89 108 aa4.1□□□□□ -1.75
CLCN3-201ENST00000347613 C3orf56Q8N813 242 aa4.1□□□□□ -1.75
CLCN3-201ENST00000347613 NDUFV3P56181 108 aaKnown RBP4.1□□□□□ -1.75
CLCN3-201ENST00000347613 PRO0255Q9UI72 69 aa4.09□□□□□ -1.75
CLCN3-201ENST00000347613 COL6A5A8TX70 2615 aa4.09□□□□□ -1.75
CLCN3-201ENST00000347613 PAX4O43316 350 aa4.09□□□□□ -1.75
CLCN3-201ENST00000347613 TEX29Q8N6K0 151 aa4.09□□□□□ -1.75
CLCN3-201ENST00000347613 A0A1B0GUV1 79 aa4.09□□□□□ -1.76
CLCN3-201ENST00000347613 NCR3O14931 201 aa4.09□□□□□ -1.76
CLCN3-201ENST00000347613 HTN3P15516 51 aa4.09□□□□□ -1.76
CLCN3-201ENST00000347613 LECT2O14960 151 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 KRTAP10-11P60412 298 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 UNQ6190/PRO20217Q6UXQ8 127 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 SDIM1Q6ZPB5 146 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 CHCHD10Q8WYQ3 142 aaPredicted RBP4.08□□□□□ -1.76
CLCN3-201ENST00000347613 C14orf132Q9NPU4 83 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 IBA57-AS1B1ANH7 110 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 ANAPC13Q9BS18 74 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 V9GYY9 64 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 B5MCH6 92 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 SNCGO76070 127 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 TRACP01848 142 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 ANGP03950 147 aaKnown RBP4.08□□□□□ -1.76
CLCN3-201ENST00000347613 CMC4P56277 68 aaPredicted RBP4.08□□□□□ -1.76
CLCN3-201ENST00000347613 GAGE2BQ13066 116 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 GAGE2EQ4V326 116 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 ENHOQ6UWT2 76 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 C11orf45Q8TAV5 145 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 GAGE2DQ9UEU5 116 aa4.08□□□□□ -1.76
CLCN3-201ENST00000347613 CRPP02741 224 aa4.07□□□□□ -1.76
CLCN3-201ENST00000347613 IGHV4-30-4P0DP06 118 aa4.07□□□□□ -1.76
CLCN3-201ENST00000347613 REG3AQ06141 175 aa4.07□□□□□ -1.76
CLCN3-201ENST00000347613 M0R2N4 97 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms