RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 LY6G6DO95868 133 aa10.69□□□□□ -0.7
LMNA-201ENST00000347559 A0A087WZ39 114 aa10.69□□□□□ -0.7
LMNA-201ENST00000347559 RBM3P98179 157 aaKnown RBP10.69□□□□□ -0.7
LMNA-201ENST00000347559 LYPD5Q6UWN5 251 aa10.69□□□□□ -0.7
LMNA-201ENST00000347559 CHD6Q8TD26 2715 aa10.69□□□□□ -0.7
LMNA-201ENST00000347559 NANOS2P60321 138 aaKnown RBP10.69□□□□□ -0.7
LMNA-201ENST00000347559 TRGV4A0A0C4DH28 118 aa10.68□□□□□ -0.7
LMNA-201ENST00000347559 C6orf99Q4VX62 202 aa10.68□□□□□ -0.7
LMNA-201ENST00000347559 MAPK1IP1LQ8NDC0 245 aa10.68□□□□□ -0.7
LMNA-201ENST00000347559 LINC00474Q9P2X8 69 aa10.68□□□□□ -0.7
LMNA-201ENST00000347559 PLA2G2AP14555 144 aa10.67□□□□□ -0.7
LMNA-201ENST00000347559 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
LMNA-201ENST00000347559 LINC01547P58512 204 aaPredicted RBP10.67□□□□□ -0.7
LMNA-201ENST00000347559 SCXQ7RTU7 201 aa10.67□□□□□ -0.7
LMNA-201ENST00000347559 FP248Q71RG6 208 aaPredicted RBP10.67□□□□□ -0.7
LMNA-201ENST00000347559 POLQO75417 2590 aa10.66□□□□□ -0.7
LMNA-201ENST00000347559 FN1P02751 2386 aaKnown RBP10.66□□□□□ -0.7
LMNA-201ENST00000347559 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
LMNA-201ENST00000347559 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
LMNA-201ENST00000347559 ODF3L2Q3SX64 289 aa10.66□□□□□ -0.7
LMNA-201ENST00000347559 CHD8Q9HCK8 2581 aa10.66□□□□□ -0.7
LMNA-201ENST00000347559 B4DSR2 109 aa10.65□□□□□ -0.7
LMNA-201ENST00000347559 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
LMNA-201ENST00000347559 LINC00167Q96N53 147 aa10.65□□□□□ -0.7
LMNA-201ENST00000347559 PRB1P04280 392 aa10.65□□□□□ -0.7
LMNA-201ENST00000347559 SMIM26A0A096LP01 95 aa10.64□□□□□ -0.71
LMNA-201ENST00000347559 A0A0U1RQV1 116 aa10.64□□□□□ -0.71
LMNA-201ENST00000347559 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
LMNA-201ENST00000347559 TRBV6-8A0A0A6YYG3 113 aa10.64□□□□□ -0.71
LMNA-201ENST00000347559 BRK1Q8WUW1 75 aa10.64□□□□□ -0.71
LMNA-201ENST00000347559 ZNF702PQ9H963 129 aa10.64□□□□□ -0.71
LMNA-201ENST00000347559 Q6ZQT0 140 aa10.63□□□□□ -0.71
LMNA-201ENST00000347559 Q6ZVQ6 151 aa10.63□□□□□ -0.71
LMNA-201ENST00000347559 IL17DQ8TAD2 202 aa10.63□□□□□ -0.71
LMNA-201ENST00000347559 MXRA5Q9NR99 2828 aa10.63□□□□□ -0.71
LMNA-201ENST00000347559 EPM2AB3EWF7 344 aa10.63□□□□□ -0.71
LMNA-201ENST00000347559 KLKP1Q107X0 134 aa10.63□□□□□ -0.71
LMNA-201ENST00000347559 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
LMNA-201ENST00000347559 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
LMNA-201ENST00000347559 TM2D3Q9BRN9 247 aa10.62□□□□□ -0.71
LMNA-201ENST00000347559 TRBV7-6A0A0J9YX20 115 aa10.61□□□□□ -0.71
LMNA-201ENST00000347559 Q8N3U1 123 aa10.61□□□□□ -0.71
LMNA-201ENST00000347559 LINC00482Q8N8I6 264 aa10.61□□□□□ -0.71
LMNA-201ENST00000347559 C16orf95Q9H693 158 aa10.61□□□□□ -0.71
LMNA-201ENST00000347559 ZNF843Q8N446 348 aa10.61□□□□□ -0.71
LMNA-201ENST00000347559 SONP18583 2426 aaKnown RBP10.6□□□□□ -0.71
LMNA-201ENST00000347559 FBN2P35556 2912 aa10.6□□□□□ -0.71
LMNA-201ENST00000347559 SPATA3Q8NHX4 192 aa10.6□□□□□ -0.71
LMNA-201ENST00000347559 EPG5Q9HCE0 2579 aa10.59□□□□□ -0.71
LMNA-201ENST00000347559 MPLKIPQ8TAP9 179 aa10.59□□□□□ -0.71
LMNA-201ENST00000347559 CENPEQ02224 2701 aa10.59□□□□□ -0.71
LMNA-201ENST00000347559 A0A1W2PRX2 142 aa10.59□□□□□ -0.71
LMNA-201ENST00000347559 A0A096LPF7 62 aa10.58□□□□□ -0.72
LMNA-201ENST00000347559 LINC00575Q6W349 94 aa10.58□□□□□ -0.72
LMNA-201ENST00000347559 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
LMNA-201ENST00000347559 NIPBLQ6KC79 2804 aaeCLIP10.58□□□□□ -0.724e-6■■■□□ 16.9
LMNA-201ENST00000347559 Q8NDZ9 215 aa10.57□□□□□ -0.72
LMNA-201ENST00000347559 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
LMNA-201ENST00000347559 IGLV10-54A0A075B6I4 117 aa10.57□□□□□ -0.72
LMNA-201ENST00000347559 Q6ZQY7 126 aa10.56□□□□□ -0.72
LMNA-201ENST00000347559 Q8IZM0 81 aa10.56□□□□□ -0.72
LMNA-201ENST00000347559 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
LMNA-201ENST00000347559 ZFYVE26Q68DK2 2539 aa10.56□□□□□ -0.72
LMNA-201ENST00000347559 DEFB130BP0DP73 79 aa10.55□□□□□ -0.72
LMNA-201ENST00000347559 DEFB130AP0DP74 79 aa10.55□□□□□ -0.72
LMNA-201ENST00000347559 GNLYP22749 145 aa10.55□□□□□ -0.72
LMNA-201ENST00000347559 MIFP14174 115 aa10.55□□□□□ -0.72
LMNA-201ENST00000347559 BCE1O60756 84 aa10.54□□□□□ -0.72
LMNA-201ENST00000347559 NAV2Q8IVL1 2488 aa10.53□□□□□ -0.72
LMNA-201ENST00000347559 LOC110117498A0A087WWA1 95 aa10.53□□□□□ -0.72
LMNA-201ENST00000347559 PLAC8L1A1L4L8 177 aa10.53□□□□□ -0.72
LMNA-201ENST00000347559 SPTBN4Q9H254 2564 aa10.53□□□□□ -0.72
LMNA-201ENST00000347559 SETXQ7Z333 2677 aaKnown RBP10.53□□□□□ -0.72
LMNA-201ENST00000347559 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
LMNA-201ENST00000347559 C6orf223Q8N319 242 aa10.52□□□□□ -0.72
LMNA-201ENST00000347559 C16orf74Q96GX8 76 aa10.52□□□□□ -0.72
LMNA-201ENST00000347559 LRRK2Q5S007 2527 aa10.52□□□□□ -0.73
LMNA-201ENST00000347559 UTP20O75691 2785 aaKnown RBP10.51□□□□□ -0.73
LMNA-201ENST00000347559 NREPQ16612 68 aa10.51□□□□□ -0.73
LMNA-201ENST00000347559 LINC01356Q8N9X3 169 aa10.51□□□□□ -0.73
LMNA-201ENST00000347559 NBEAL2Q6ZNJ1 2754 aa10.51□□□□□ -0.73
LMNA-201ENST00000347559 ANKRD17O75179 2603 aaKnown RBP10.51□□□□□ -0.73
LMNA-201ENST00000347559 FAM229BQ4G0N7 80 aa10.51□□□□□ -0.73
LMNA-201ENST00000347559 Q8N9L7 120 aa10.51□□□□□ -0.73
LMNA-201ENST00000347559 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
LMNA-201ENST00000347559 GYPEP15421 78 aa10.5□□□□□ -0.73
LMNA-201ENST00000347559 CXCL6P80162 114 aa10.5□□□□□ -0.73
LMNA-201ENST00000347559 Q6YL49 198 aa10.5□□□□□ -0.73
LMNA-201ENST00000347559 MUC7Q8TAX7 377 aa10.5□□□□□ -0.73
LMNA-201ENST00000347559 TMEM254Q8TBM7 123 aa10.5□□□□□ -0.73
LMNA-201ENST00000347559 TRBV7-4A0A0J9YYF1 115 aa10.49□□□□□ -0.73
LMNA-201ENST00000347559 NDUFC1O43677 76 aa10.49□□□□□ -0.73
LMNA-201ENST00000347559 FLNCQ14315 2725 aa10.49□□□□□ -0.73
LMNA-201ENST00000347559 BPY2O14599 106 aa10.48□□□□□ -0.73
LMNA-201ENST00000347559 C1orf195Q5TG92 126 aa10.48□□□□□ -0.73
LMNA-201ENST00000347559 KIAA0087Q14695 138 aa10.48□□□□□ -0.73
LMNA-201ENST00000347559 DAD1P61803 113 aa10.47□□□□□ -0.73
LMNA-201ENST00000347559 NF1P21359 2839 aa10.47□□□□□ -0.73
LMNA-201ENST00000347559 ACACBO00763 2458 aa10.47□□□□□ -0.73
LMNA-201ENST00000347559 TEX15Q9BXT5 2789 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms