RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FASNP49327 2511 aaKnown RBP7.83□□□□□ -1.16
CLCN6-202ENST00000346436 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 XGP55808 180 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 K7ERS5 55 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 BPY2O14599 106 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 EGFEM1PQ0D2K5 195 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 C1orf137Q5JT78 98 aa7.83□□□□□ -1.16
CLCN6-202ENST00000346436 IGLV9-49A0A0B4J1Y8 123 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 LOC100131303A0A0U1RQF7 123 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 IGKV2-28A0A075B6P5 120 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 IGKV2D-28P01615 120 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 COX17Q14061 63 aa7.82□□□□□ -1.16
CLCN6-202ENST00000346436 H3BT86 120 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 WFDC9Q8NEX5 89 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 SMIM20Q8N5G0 67 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 PYGO1Q9Y3Y4 419 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 DSPP15924 2871 aaKnown RBP7.81□□□□□ -1.16
CLCN6-202ENST00000346436 LINC01556Q5JQF7 62 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 Q8N2B8 174 aa7.81□□□□□ -1.16
CLCN6-202ENST00000346436 COL27A1Q8IZC6 1860 aaPredicted RBP7.8□□□□□ -1.16
CLCN6-202ENST00000346436 C10orf25Q5T742 122 aa7.8□□□□□ -1.16
CLCN6-202ENST00000346436 NBEAQ8NFP9 2946 aa7.8□□□□□ -1.16
CLCN6-202ENST00000346436 SLPIP03973 132 aa7.8□□□□□ -1.16
CLCN6-202ENST00000346436 ABCA12Q86UK0 2595 aa7.79□□□□□ -1.16
CLCN6-202ENST00000346436 Q6ZSN1 163 aa7.78□□□□□ -1.16
CLCN6-202ENST00000346436 MRPS36P82909 103 aaKnown RBP7.78□□□□□ -1.16
CLCN6-202ENST00000346436 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
CLCN6-202ENST00000346436 CIRBP-AS1Q8TBR5 109 aa7.78□□□□□ -1.16
CLCN6-202ENST00000346436 NDUFV3P56181 108 aaKnown RBP7.78□□□□□ -1.16
CLCN6-202ENST00000346436 FREM2Q5SZK8 3169 aa7.78□□□□□ -1.16
CLCN6-202ENST00000346436 ADAMTSL4-AS1Q5T5F5 129 aa7.78□□□□□ -1.16
CLCN6-202ENST00000346436 Q8IZM0 81 aa7.77□□□□□ -1.17
CLCN6-202ENST00000346436 HRCT1Q6UXD1 115 aa7.77□□□□□ -1.17
CLCN6-202ENST00000346436 FN1P02751 2386 aaKnown RBP7.77□□□□□ -1.17
CLCN6-202ENST00000346436 COX6A2Q02221 97 aa7.76□□□□□ -1.17
CLCN6-202ENST00000346436 FRYQ5TBA9 3013 aa7.76□□□□□ -1.17
CLCN6-202ENST00000346436 RPL37AP8A6NKH3 93 aa7.75□□□□□ -1.17
CLCN6-202ENST00000346436 LST1O00453 97 aa7.75□□□□□ -1.17
CLCN6-202ENST00000346436 C2orf48Q96LS8 159 aa7.75□□□□□ -1.17
CLCN6-202ENST00000346436 LINC00694P0DN24 101 aa7.75□□□□□ -1.17
CLCN6-202ENST00000346436 C1orf158Q8N1D5 194 aa7.75□□□□□ -1.17
CLCN6-202ENST00000346436 KIF25-AS1Q9Y6Z4 181 aa7.75□□□□□ -1.17
CLCN6-202ENST00000346436 COL6A3P12111 3177 aa7.74□□□□□ -1.17
CLCN6-202ENST00000346436 CYSRT1A8MQ03 144 aa7.74□□□□□ -1.17
CLCN6-202ENST00000346436 LYPD5Q6UWN5 251 aa7.74□□□□□ -1.17
CLCN6-202ENST00000346436 SDIM1Q6ZPB5 146 aa7.74□□□□□ -1.17
CLCN6-202ENST00000346436 Q9UF83 564 aa7.73□□□□□ -1.17
CLCN6-202ENST00000346436 LINC01546A6NGU7 62 aa7.73□□□□□ -1.17
CLCN6-202ENST00000346436 LINC00526Q96FQ7 95 aa7.73□□□□□ -1.17
CLCN6-202ENST00000346436 Q6JHZ5 121 aa7.73□□□□□ -1.17
CLCN6-202ENST00000346436 LINC00315P59091 139 aa7.73□□□□□ -1.17
CLCN6-202ENST00000346436 C6orf99Q4VX62 202 aa7.73□□□□□ -1.17
CLCN6-202ENST00000346436 FHL2Q14192 279 aa7.72□□□□□ -1.17
CLCN6-202ENST00000346436 BEAN1Q3B7T3 259 aa7.72□□□□□ -1.17
CLCN6-202ENST00000346436 LINC00242Q5T6M2 205 aa7.72□□□□□ -1.17
CLCN6-202ENST00000346436 ZNF73O43830 326 aaPredicted RBP7.71□□□□□ -1.17
CLCN6-202ENST00000346436 CCDC179H3BU77 68 aa7.71□□□□□ -1.17
CLCN6-202ENST00000346436 C5orf47Q569G3 176 aa7.71□□□□□ -1.18
CLCN6-202ENST00000346436 SBSPONQ8IVN8 264 aa7.71□□□□□ -1.18
CLCN6-202ENST00000346436 H3BNG1 76 aa7.7□□□□□ -1.18
CLCN6-202ENST00000346436 MTORP42345 2549 aa7.7□□□□□ -1.18
CLCN6-202ENST00000346436 CCKP06307 115 aa7.7□□□□□ -1.18
CLCN6-202ENST00000346436 CDC42SE2Q9NRR3 84 aa7.7□□□□□ -1.18
CLCN6-202ENST00000346436 BOD1L1Q8NFC6 3051 aa7.7□□□□□ -1.18
CLCN6-202ENST00000346436 NBDYA0A0U1RRE5 68 aa7.69□□□□□ -1.18
CLCN6-202ENST00000346436 TIMM17BO60830 172 aa7.69□□□□□ -1.18
CLCN6-202ENST00000346436 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
CLCN6-202ENST00000346436 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
CLCN6-202ENST00000346436 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
CLCN6-202ENST00000346436 WFDC10BQ8IUB3 73 aa7.69□□□□□ -1.18
CLCN6-202ENST00000346436 AMELXQ99217 191 aa7.69□□□□□ -1.18
CLCN6-202ENST00000346436 SERP1Q9Y6X1 66 aa7.69□□□□□ -1.18
CLCN6-202ENST00000346436 SMIM1B2RUZ4 78 aa7.68□□□□□ -1.18
CLCN6-202ENST00000346436 PRYO14603 147 aa7.68□□□□□ -1.18
CLCN6-202ENST00000346436 LINC00336Q6ZUF6 198 aa7.68□□□□□ -1.18
CLCN6-202ENST00000346436 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
CLCN6-202ENST00000346436 SMIM11BQ8TCY0 68 aa7.68□□□□□ -1.18
CLCN6-202ENST00000346436 NDUFC2-KCTD14E9PQ53 114 aa7.67□□□□□ -1.18
CLCN6-202ENST00000346436 Q6ZVQ6 151 aa7.67□□□□□ -1.18
CLCN6-202ENST00000346436 ANKRD17O75179 2603 aaKnown RBP7.67□□□□□ -1.18
CLCN6-202ENST00000346436 A0A1B0GUV1 79 aa7.67□□□□□ -1.18
CLCN6-202ENST00000346436 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
CLCN6-202ENST00000346436 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
CLCN6-202ENST00000346436 PKD1L2Q7Z442 2459 aa7.67□□□□□ -1.18
CLCN6-202ENST00000346436 IGLV4-60A0A075B6I1 120 aa7.66□□□□□ -1.18
CLCN6-202ENST00000346436 ATOX1O00244 68 aa7.66□□□□□ -1.18
CLCN6-202ENST00000346436 PRR15LQ9BU68 103 aa7.66□□□□□ -1.18
CLCN6-202ENST00000346436 Q6ZQY7 126 aa7.65□□□□□ -1.18
CLCN6-202ENST00000346436 PRO0461Q9UI25 63 aa7.65□□□□□ -1.18
CLCN6-202ENST00000346436 PRR3P79522 188 aaKnown RBP7.65□□□□□ -1.19
CLCN6-202ENST00000346436 UNQ6190/PRO20217Q6UXQ8 127 aa7.65□□□□□ -1.19
CLCN6-202ENST00000346436 ATP5EP2Q5VTU8 51 aa7.64□□□□□ -1.19
CLCN6-202ENST00000346436 LINC01561Q8N1V8 128 aa7.64□□□□□ -1.19
CLCN6-202ENST00000346436 ACANP16112 2415 aa7.64□□□□□ -1.19
CLCN6-202ENST00000346436 RTL8CO15255 209 aa7.64□□□□□ -1.19
CLCN6-202ENST00000346436 Q6ZRP5 223 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms