RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
VHL-202ENST00000345392 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
VHL-202ENST00000345392 PAX4O43316 350 aa12.5□□□□□ -0.41
VHL-202ENST00000345392 ATOX1O00244 68 aa12.49□□□□□ -0.41
VHL-202ENST00000345392 A0A1B0GX51 115 aa12.48□□□□□ -0.41
VHL-202ENST00000345392 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
VHL-202ENST00000345392 WFDC10AQ9H1F0 79 aa12.48□□□□□ -0.41
VHL-202ENST00000345392 H0YGX0 51 aa12.47□□□□□ -0.41
VHL-202ENST00000345392 CRYGAP11844 174 aa12.47□□□□□ -0.41
VHL-202ENST00000345392 RPL18AQ02543 176 aaKnown RBP12.47□□□□□ -0.41
VHL-202ENST00000345392 IGHV3OR16-9A0A0B4J2B5 98 aa12.46□□□□□ -0.41
VHL-202ENST00000345392 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
VHL-202ENST00000345392 OBSCN-AS1Q96MR7 158 aa12.45□□□□□ -0.42
VHL-202ENST00000345392 FN1P02751 2386 aaKnown RBP12.44□□□□□ -0.42
VHL-202ENST00000345392 TRGV4A0A0C4DH28 118 aa12.44□□□□□ -0.42
VHL-202ENST00000345392 IBA57-AS1B1ANH7 110 aa12.44□□□□□ -0.42
VHL-202ENST00000345392 LINC01561Q8N1V8 128 aa12.44□□□□□ -0.42
VHL-202ENST00000345392 PLAC8L1A1L4L8 177 aa12.43□□□□□ -0.42
VHL-202ENST00000345392 Q6JHZ5 121 aa12.43□□□□□ -0.42
VHL-202ENST00000345392 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
VHL-202ENST00000345392 J3KT08 172 aa12.42□□□□□ -0.42
VHL-202ENST00000345392 RPL35AP18077 110 aaKnown RBP12.42□□□□□ -0.42
VHL-202ENST00000345392 A0A087WZ39 114 aa12.41□□□□□ -0.42
VHL-202ENST00000345392 SS18Q15532 418 aa12.41□□□□□ -0.42
VHL-202ENST00000345392 C6orf226Q5I0X4 101 aa12.41□□□□□ -0.42
VHL-202ENST00000345392 FAM19A5Q7Z5A7 132 aaPredicted RBP12.41□□□□□ -0.42
VHL-202ENST00000345392 WFDC11Q8NEX6 87 aa12.41□□□□□ -0.42
VHL-202ENST00000345392 TRBV6-8A0A0A6YYG3 113 aa12.41□□□□□ -0.42
VHL-202ENST00000345392 DNAJC9-AS1A6NH13 148 aa12.41□□□□□ -0.42
VHL-202ENST00000345392 PRR3P79522 188 aaKnown RBP12.41□□□□□ -0.42
VHL-202ENST00000345392 ESM1Q9NQ30 184 aa12.4□□□□□ -0.42
VHL-202ENST00000345392 TRBV6-4A0A1B0GX49 114 aa12.4□□□□□ -0.42
VHL-202ENST00000345392 KRTAP1-3Q8IUG1 177 aa12.4□□□□□ -0.42
VHL-202ENST00000345392 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
VHL-202ENST00000345392 ORMDL1Q9P0S3 153 aa12.4□□□□□ -0.42
VHL-202ENST00000345392 NBEAL2Q6ZNJ1 2754 aa12.4□□□□□ -0.43
VHL-202ENST00000345392 USP17L23D6RBM5 183 aa12.39□□□□□ -0.43
VHL-202ENST00000345392 CCL24O00175 119 aa12.39□□□□□ -0.43
VHL-202ENST00000345392 SERP2Q8N6R1 65 aa12.39□□□□□ -0.43
VHL-202ENST00000345392 WFDC9Q8NEX5 89 aa12.39□□□□□ -0.43
VHL-202ENST00000345392 XCL1P47992 114 aa12.38□□□□□ -0.43
VHL-202ENST00000345392 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
VHL-202ENST00000345392 HILS1P60008 231 aa12.37□□□□□ -0.43
VHL-202ENST00000345392 C16orf74Q96GX8 76 aa12.37□□□□□ -0.43
VHL-202ENST00000345392 LINC00959A0A1B0GUT2 108 aa12.37□□□□□ -0.43
VHL-202ENST00000345392 CLPSL2Q6UWE3 100 aa12.36□□□□□ -0.43
VHL-202ENST00000345392 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
VHL-202ENST00000345392 FHL2Q14192 279 aa12.35□□□□□ -0.43
VHL-202ENST00000345392 CCKP06307 115 aa12.35□□□□□ -0.43
VHL-202ENST00000345392 LY6G6DO95868 133 aa12.34□□□□□ -0.43
VHL-202ENST00000345392 RNASE1P07998 156 aaKnown RBP12.34□□□□□ -0.43
VHL-202ENST00000345392 OTOGQ6ZRI0 2925 aa12.33□□□□□ -0.44
VHL-202ENST00000345392 DSCR8Q96T75 97 aa12.33□□□□□ -0.44
VHL-202ENST00000345392 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
VHL-202ENST00000345392 DPH3Q96FX2 82 aa12.32□□□□□ -0.44
VHL-202ENST00000345392 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
VHL-202ENST00000345392 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
VHL-202ENST00000345392 TMEM86BQ8N661 226 aa12.31□□□□□ -0.44
VHL-202ENST00000345392 Q8N814 137 aa12.31□□□□□ -0.44
VHL-202ENST00000345392 SMIM9A6NGZ8 99 aa12.3□□□□□ -0.44
VHL-202ENST00000345392 CYSRT1A8MQ03 144 aa12.3□□□□□ -0.44
VHL-202ENST00000345392 FAM19A1Q7Z5A9 133 aa12.3□□□□□ -0.44
VHL-202ENST00000345392 TRAV23DV6A0A075B6W5 121 aa12.3□□□□□ -0.44
VHL-202ENST00000345392 A0A096LPF7 62 aa12.3□□□□□ -0.44
VHL-202ENST00000345392 RPS28P62857 69 aaKnown RBP12.3□□□□□ -0.44
VHL-202ENST00000345392 TMEM258P61165 79 aa12.29□□□□□ -0.44
VHL-202ENST00000345392 CSNK1G2-AS1Q8NCQ2 148 aa12.29□□□□□ -0.44
VHL-202ENST00000345392 ANK3Q12955 4377 aaKnown RBP12.28□□□□□ -0.44
VHL-202ENST00000345392 ENHOQ6UWT2 76 aa12.28□□□□□ -0.44
VHL-202ENST00000345392 OXTP01178 125 aa12.28□□□□□ -0.44
VHL-202ENST00000345392 SMR3AQ99954 134 aa12.27□□□□□ -0.44
VHL-202ENST00000345392 GHRHP01286 108 aa12.27□□□□□ -0.45
VHL-202ENST00000345392 C9orf116Q5BN46 136 aaPredicted RBP12.27□□□□□ -0.45
VHL-202ENST00000345392 JMJD7-PLA2G4BH0Y9G9 81 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 LINC01006Q8NI28 216 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 VWFP04275 2813 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 TMEM256-PLSCR3K7ERE1 68 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 GYPEP15421 78 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 Q8IZM0 81 aa12.26□□□□□ -0.45
VHL-202ENST00000345392 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
VHL-202ENST00000345392 C5orf47Q569G3 176 aa12.24□□□□□ -0.45
VHL-202ENST00000345392 HIVEP1P15822 2718 aa12.24□□□□□ -0.45
VHL-202ENST00000345392 IGLV10-54A0A075B6I4 117 aa12.23□□□□□ -0.45
VHL-202ENST00000345392 C6orf99Q4VX62 202 aa12.23□□□□□ -0.45
VHL-202ENST00000345392 Q8NDZ9 215 aa12.23□□□□□ -0.45
VHL-202ENST00000345392 S100A7L2Q5SY68 101 aa12.23□□□□□ -0.45
VHL-202ENST00000345392 TEP1Q99973 2627 aaKnown RBP12.22□□□□□ -0.45
VHL-202ENST00000345392 Q8N3U1 123 aa12.21□□□□□ -0.46
VHL-202ENST00000345392 F8P00451 2351 aa12.2□□□□□ -0.46
VHL-202ENST00000345392 LINC00269Q8N2A0 174 aa12.2□□□□□ -0.46
VHL-202ENST00000345392 UBL5Q9BZL1 73 aa12.2□□□□□ -0.46
VHL-202ENST00000345392 KIAA0087Q14695 138 aa12.2□□□□□ -0.46
VHL-202ENST00000345392 A0A1B0GUV1 79 aa12.19□□□□□ -0.46
VHL-202ENST00000345392 C20orf197Q8N268 126 aa12.19□□□□□ -0.46
VHL-202ENST00000345392 HIVEP2P31629 2446 aa12.18□□□□□ -0.46
VHL-202ENST00000345392 IGLV1-51P01701 117 aa12.18□□□□□ -0.46
VHL-202ENST00000345392 M0R2N4 97 aa12.18□□□□□ -0.46
VHL-202ENST00000345392 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
VHL-202ENST00000345392 ATP5EP2Q5VTU8 51 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms