RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CYSRT1A8MQ03 144 aa11.65□□□□□ -0.54
SMARCA4-201ENST00000344626 EGFEM1PQ0D2K5 195 aa11.64□□□□□ -0.55
SMARCA4-201ENST00000344626 IGIPA6NJ69 53 aa11.64□□□□□ -0.55
SMARCA4-201ENST00000344626 FLNCQ14315 2725 aa11.64□□□□□ -0.55
SMARCA4-201ENST00000344626 A0A1B0GUV1 79 aa11.64□□□□□ -0.55
SMARCA4-201ENST00000344626 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
SMARCA4-201ENST00000344626 VPS13AQ96RL7 3174 aa11.63□□□□□ -0.55
SMARCA4-201ENST00000344626 DHRS4-AS1Q9P1J3 65 aa11.63□□□□□ -0.55
SMARCA4-201ENST00000344626 LINC00242Q5T6M2 205 aa11.62□□□□□ -0.55
SMARCA4-201ENST00000344626 KRTAP1-1Q07627 177 aa11.62□□□□□ -0.55
SMARCA4-201ENST00000344626 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
SMARCA4-201ENST00000344626 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
SMARCA4-201ENST00000344626 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
SMARCA4-201ENST00000344626 FRYLO94915 3013 aa11.61□□□□□ -0.55
SMARCA4-201ENST00000344626 COL27A1Q8IZC6 1860 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-201ENST00000344626 A8MZ25 164 aa11.6□□□□□ -0.55
SMARCA4-201ENST00000344626 K7EIL1 84 aa11.6□□□□□ -0.55
SMARCA4-201ENST00000344626 FOXI1Q12951 378 aa11.6□□□□□ -0.55
SMARCA4-201ENST00000344626 KLK9Q2XQG4 91 aa11.6□□□□□ -0.55
SMARCA4-201ENST00000344626 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
SMARCA4-201ENST00000344626 C11orf72Q8NBR9 251 aa11.6□□□□□ -0.55
SMARCA4-201ENST00000344626 TEN1Q86WV5 123 aa11.59□□□□□ -0.55
SMARCA4-201ENST00000344626 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
SMARCA4-201ENST00000344626 UBR5O95071 2799 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-201ENST00000344626 POM121L12Q8N7R1 296 aa11.58□□□□□ -0.56
SMARCA4-201ENST00000344626 PLAC8L1A1L4L8 177 aa11.58□□□□□ -0.56
SMARCA4-201ENST00000344626 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
SMARCA4-201ENST00000344626 Q6ZSN1 163 aa11.58□□□□□ -0.56
SMARCA4-201ENST00000344626 H0Y9J4 135 aa11.57□□□□□ -0.56
SMARCA4-201ENST00000344626 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
SMARCA4-201ENST00000344626 LINC00694P0DN24 101 aa11.57□□□□□ -0.56
SMARCA4-201ENST00000344626 H3BNG1 76 aa11.56□□□□□ -0.56
SMARCA4-201ENST00000344626 UNQ6190/PRO20217Q6UXQ8 127 aa11.56□□□□□ -0.56
SMARCA4-201ENST00000344626 FAM19A4Q96LR4 140 aa11.56□□□□□ -0.56
SMARCA4-201ENST00000344626 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
SMARCA4-201ENST00000344626 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
SMARCA4-201ENST00000344626 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
SMARCA4-201ENST00000344626 RPL28P46779 137 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-201ENST00000344626 M0QXV9 152 aa11.54□□□□□ -0.56
SMARCA4-201ENST00000344626 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
SMARCA4-201ENST00000344626 RPL37AP8A6NKH3 93 aa11.54□□□□□ -0.56
SMARCA4-201ENST00000344626 SMIM1B2RUZ4 78 aa11.54□□□□□ -0.56
SMARCA4-201ENST00000344626 VCANP13611 3396 aa11.53□□□□□ -0.56
SMARCA4-201ENST00000344626 AMELXQ99217 191 aa11.53□□□□□ -0.56
SMARCA4-201ENST00000344626 A0A1B0GX51 115 aa11.53□□□□□ -0.56
SMARCA4-201ENST00000344626 X6R8D5 127 aa11.53□□□□□ -0.56
SMARCA4-201ENST00000344626 KRTAP10-3P60369 221 aa11.52□□□□□ -0.56
SMARCA4-201ENST00000344626 C6orf223Q8N319 242 aa11.52□□□□□ -0.56
SMARCA4-201ENST00000344626 MP68P56378 58 aa11.52□□□□□ -0.57
SMARCA4-201ENST00000344626 ZNF73O43830 326 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-201ENST00000344626 PPDPFQ9H3Y8 114 aa11.52□□□□□ -0.57
SMARCA4-201ENST00000344626 TCL1BO95988 128 aa11.52□□□□□ -0.57
SMARCA4-201ENST00000344626 KRTAP10-11P60412 298 aa11.51□□□□□ -0.57
SMARCA4-201ENST00000344626 LINC01556Q5JQF7 62 aa11.51□□□□□ -0.57
SMARCA4-201ENST00000344626 ESRGQ1W209 222 aa11.5□□□□□ -0.57
SMARCA4-201ENST00000344626 COX6A2Q02221 97 aa11.5□□□□□ -0.57
SMARCA4-201ENST00000344626 SS18L2Q9UHA2 77 aa11.5□□□□□ -0.57
SMARCA4-201ENST00000344626 C14orf132Q9NPU4 83 aa11.5□□□□□ -0.57
SMARCA4-201ENST00000344626 KIF25-AS1Q9Y6Z4 181 aa11.49□□□□□ -0.57
SMARCA4-201ENST00000344626 TNRC18O15417 2968 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-201ENST00000344626 NDUFC2-KCTD14E9PQ53 114 aa11.48□□□□□ -0.57
SMARCA4-201ENST00000344626 WFDC2Q14508 124 aa11.48□□□□□ -0.57
SMARCA4-201ENST00000344626 BPY2O14599 106 aa11.48□□□□□ -0.57
SMARCA4-201ENST00000344626 TRIAP1O43715 76 aa11.47□□□□□ -0.57
SMARCA4-201ENST00000344626 IGKV3D-7A0A0C4DH55 119 aa11.47□□□□□ -0.57
SMARCA4-201ENST00000344626 SLPIP03973 132 aa11.46□□□□□ -0.57
SMARCA4-201ENST00000344626 REG3GQ6UW15 175 aa11.45□□□□□ -0.58
SMARCA4-201ENST00000344626 Q6ZQY7 126 aa11.45□□□□□ -0.58
SMARCA4-201ENST00000344626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-201ENST00000344626 Q8NAQ8 132 aa11.44□□□□□ -0.58
SMARCA4-201ENST00000344626 SMIM11BQ8TCY0 68 aa11.44□□□□□ -0.58
SMARCA4-201ENST00000344626 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
SMARCA4-201ENST00000344626 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-201ENST00000344626 URB1-AS1Q96HZ7 61 aa11.44□□□□□ -0.58
SMARCA4-201ENST00000344626 UPK3BQ9BT76 320 aa11.43□□□□□ -0.58
SMARCA4-201ENST00000344626 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
SMARCA4-201ENST00000344626 C3orf84H3BNL1 204 aa11.42□□□□□ -0.58
SMARCA4-201ENST00000344626 TACC2O95359 2948 aa11.41□□□□□ -0.58
SMARCA4-201ENST00000344626 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
SMARCA4-201ENST00000344626 CCKP06307 115 aa11.41□□□□□ -0.58
SMARCA4-201ENST00000344626 IGLV9-49A0A0B4J1Y8 123 aa11.4□□□□□ -0.58
SMARCA4-201ENST00000344626 FRYQ5TBA9 3013 aa11.4□□□□□ -0.58
SMARCA4-201ENST00000344626 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.59
SMARCA4-201ENST00000344626 LINC00315P59091 139 aa11.39□□□□□ -0.59
SMARCA4-201ENST00000344626 COL12A1Q99715 3063 aa11.39□□□□□ -0.59
SMARCA4-201ENST00000344626 TRBV10-3A0A0K0K1G6 114 aa11.38□□□□□ -0.59
SMARCA4-201ENST00000344626 C1orf137Q5JT78 98 aa11.38□□□□□ -0.59
SMARCA4-201ENST00000344626 MRPL55Q7Z7F7 128 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-201ENST00000344626 NSD1Q96L73 2696 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-201ENST00000344626 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
SMARCA4-201ENST00000344626 CHKB-CPT1BH3BT56 60 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 ATOX1O00244 68 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 NDUFC2O95298 119 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 SPINK6Q6UWN8 80 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 Q6ZRU5 148 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 ATMQ13315 3056 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 DMXL2Q8TDJ6 3036 aa11.37□□□□□ -0.59
SMARCA4-201ENST00000344626 LINC00643Q86TS7 51 aa11.36□□□□□ -0.59
SMARCA4-201ENST00000344626 PRYO14603 147 aa11.36□□□□□ -0.59
SMARCA4-201ENST00000344626 LINC00310P59036 64 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms