RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 PLXNA4Q9HCM2 1894 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 IGKV1D-37A0A075B6S9 117 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 Q6ZQT0 140 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 FP248Q71RG6 208 aaPredicted RBP2.7□□□□□ -1.98
SYNE2-202ENST00000344113 ZNF843Q8N446 348 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 SPART-AS1P0CW21 52 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 LINC00588Q9Y4M8 146 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 DNAJC9-AS1A6NH13 148 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 NOP10Q9NPE3 64 aaKnown RBP2.7□□□□□ -1.98
SYNE2-202ENST00000344113 A0A087WVE0 104 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 GNRH2O43555 120 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 LY6G6DO95868 133 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 DEFB130BP0DP73 79 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 DEFB130AP0DP74 79 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 IGLV7-46A0A075B6I9 117 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 MAP6D1Q9H9H5 199 aa2.7□□□□□ -1.98
SYNE2-202ENST00000344113 CHCHD10Q8WYQ3 142 aaPredicted RBP2.7□□□□□ -1.98
SYNE2-202ENST00000344113 IGLV7-43P04211 117 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 KPRPQ5T749 579 aaPredicted RBP2.69□□□□□ -1.98
SYNE2-202ENST00000344113 LCE6AA0A183 80 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 IGFL4Q6B9Z1 124 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 TSPEAR-AS2P59090 65 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 C17orf58Q2M2W7 97 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 SYCNQ0VAF6 134 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 LY6G6EA0A0G2JKS1 128 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 REV3LO60673 3130 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 SSBP3-AS1Q7Z2R9 100 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 UBE2DNLQ8IWF7 75 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 IGLV3-9A0A075B6K5 115 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 OVOL3O00110 214 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 IGHV4-59P01825 116 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 CRIP1P50238 77 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 ADAMTSL4-AS1Q5T5F5 129 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 S4R3C0 116 aa2.69□□□□□ -1.98
SYNE2-202ENST00000344113 TMEM92Q6UXU6 159 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 RUSC1-AS1Q66K80 236 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 Q6ZPA2 131 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 ZNRD1Q9P1U0 126 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 SLPIP03973 132 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 MOBPQ13875 183 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 DAZAP2Q15038 168 aaPredicted RBP2.68□□□□□ -1.98
SYNE2-202ENST00000344113 IGHV4-30-2A0A087WSY4 118 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 KLLNB2CW77 178 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 EGFEM1PQ0D2K5 195 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 TSHBP01222 138 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 Q6ZS46 218 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 CDC42SE2Q9NRR3 84 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 NLRC5Q86WI3 1866 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 LITAFQ99732 161 aa2.68□□□□□ -1.98
SYNE2-202ENST00000344113 IGLV10-54A0A075B6I4 117 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 USP24Q9UPU5 2620 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 WFDC13Q8IUB5 93 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 SMIM1B2RUZ4 78 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 IGHV3OR16-8A0A075B7F1 116 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 ZFHX2Q9C0A1 2572 aaPredicted RBP2.67□□□□□ -1.98
SYNE2-202ENST00000344113 COA5Q86WW8 74 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 CFAP54Q96N23 3096 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 A0A1B0GUV1 79 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 LY6EQ16553 131 aa2.67□□□□□ -1.98
SYNE2-202ENST00000344113 Q6ZSV7 163 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 A0A087WYN8 130 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 LINC00242Q5T6M2 205 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 IGKV2D-24A0A075B6R9 120 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 REG3AQ06141 175 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 LINC01356Q8N9X3 169 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 KIF25-AS1Q9Y6Z4 181 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 FREM2Q5SZK8 3169 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 IGF2RP11717 2491 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 IGLV2-23P01705 113 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 Q8NBF4 154 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 PLA2G1BP04054 148 aaKnown RBP2.66□□□□□ -1.98
SYNE2-202ENST00000344113 IGHV3-38A0A0C4DH36 116 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 DEFB103AP81534 67 aa2.66□□□□□ -1.98
SYNE2-202ENST00000344113 COL4A6Q14031 1691 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 DEFB131BA0A096LNP1 70 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 E7EUB6 86 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 SMIM29Q86T20 159 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 PLXNB2O15031 1838 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 A8MWP4 228 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 ADORA2A-AS1P86434 159 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 OCR1Q9BZK8 76 aa2.65□□□□□ -1.98
SYNE2-202ENST00000344113 COL5A3P25940 1745 aaPredicted RBP2.65□□□□□ -1.99
SYNE2-202ENST00000344113 KIF26AQ9ULI4 1882 aaPredicted RBP2.65□□□□□ -1.99
SYNE2-202ENST00000344113 KCNQ1DNQ9H478 68 aa2.65□□□□□ -1.99
SYNE2-202ENST00000344113 SPATA3Q8NHX4 192 aa2.65□□□□□ -1.99
SYNE2-202ENST00000344113 PCOTHQ58A44 107 aa2.65□□□□□ -1.99
SYNE2-202ENST00000344113 C7orf33Q8WU49 177 aa2.65□□□□□ -1.99
SYNE2-202ENST00000344113 IGLV1-50A0A075B6I6 118 aa2.65□□□□□ -1.99
SYNE2-202ENST00000344113 C10orf142B7Z368 130 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 PRR3P79522 188 aaKnown RBP2.64□□□□□ -1.99
SYNE2-202ENST00000344113 C22orf24Q9Y442 160 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 UNQ9165/PRO28630Q6UXU0 137 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 LINC00959A0A1B0GUT2 108 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 B3GALT5-AS1P59052 145 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 PIEZO2Q9H5I5 2752 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 CENPEQ02224 2701 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 BRWD3Q6RI45 1802 aa2.64□□□□□ -1.99
SYNE2-202ENST00000344113 NUP210Q8TEM1 1887 aaPredicted RBP2.64□□□□□ -1.99
SYNE2-202ENST00000344113 C5orf42Q9H799 3197 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms