RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 UNQ9165/PRO28630Q6UXU0 137 aa5.84□□□□□ -1.48
ATG4A-201ENST00000343524 LINC00167Q96N53 147 aa5.84□□□□□ -1.48
ATG4A-201ENST00000343524 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.48
ATG4A-201ENST00000343524 MOB4Q9Y3A3 225 aa5.84□□□□□ -1.48
ATG4A-201ENST00000343524 MXRA5Q9NR99 2828 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 TRBV7-6A0A0J9YX20 115 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 A0A0U1RRA0 63 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 LYNX1G3V0Z9 82 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 LYNX1P0DP58 116 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 HILS1P60008 231 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 LINC00242Q5T6M2 205 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 C5orf56Q8N8D9 126 aa5.83□□□□□ -1.48
ATG4A-201ENST00000343524 LINC00482Q8N8I6 264 aa5.82□□□□□ -1.48
ATG4A-201ENST00000343524 MAP1AP78559 2803 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-201ENST00000343524 ABCA4P78363 2273 aa5.82□□□□□ -1.48
ATG4A-201ENST00000343524 F8WEM9 126 aa5.82□□□□□ -1.48
ATG4A-201ENST00000343524 NACAE9PAV3 2078 aa5.81□□□□□ -1.48
ATG4A-201ENST00000343524 IGHV3OR16-12A0A075B7B8 117 aa5.81□□□□□ -1.48
ATG4A-201ENST00000343524 RPL36AP83881 106 aaKnown RBP5.81□□□□□ -1.48
ATG4A-201ENST00000343524 C9orf129Q5T035 196 aaKnown RBP5.81□□□□□ -1.48
ATG4A-201ENST00000343524 RPL36ALQ969Q0 106 aaKnown RBP5.81□□□□□ -1.48
ATG4A-201ENST00000343524 IGKV3-7A0A075B6H7 116 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 IGKV2-28A0A075B6P5 120 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 ERC2-IT1O76042 136 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 LY6G6DO95868 133 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 IGKV2D-28P01615 120 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 IGHV3-53P01767 116 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 CXCL6P80162 114 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 FAM19A1Q7Z5A9 133 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 SIRPDQ9H106 197 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 A0A1W2PRX2 142 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 IBA57-AS1B1ANH7 110 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 H3BQ85 93 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 COX6A2Q02221 97 aa5.8□□□□□ -1.48
ATG4A-201ENST00000343524 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-201ENST00000343524 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.79□□□□□ -1.48
ATG4A-201ENST00000343524 PDE6GP18545 87 aa5.79□□□□□ -1.48
ATG4A-201ENST00000343524 SAA4P35542 130 aa5.79□□□□□ -1.48
ATG4A-201ENST00000343524 C6orf226Q5I0X4 101 aa5.79□□□□□ -1.48
ATG4A-201ENST00000343524 C1orf158Q8N1D5 194 aa5.79□□□□□ -1.48
ATG4A-201ENST00000343524 COX7B2Q8TF08 81 aa5.79□□□□□ -1.48
ATG4A-201ENST00000343524 DYNLRB2Q8TF09 96 aa5.79□□□□□ -1.48
ATG4A-201ENST00000343524 C11orf68Q9H3H3 251 aaKnown RBP5.79□□□□□ -1.48
ATG4A-201ENST00000343524 SPINK13Q1W4C9 94 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 LOC110117498A0A087WWA1 95 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 IGHV3-73A0A0B4J1V6 119 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 PLAC8L1A1L4L8 177 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 CCL21O00585 134 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 MIFP14174 115 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 SS18Q15532 418 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 PRR15Q8IV56 129 aa5.78□□□□□ -1.48
ATG4A-201ENST00000343524 TRBV6-4A0A1B0GX49 114 aa5.77□□□□□ -1.49
ATG4A-201ENST00000343524 LINC00158P58513 81 aa5.77□□□□□ -1.49
ATG4A-201ENST00000343524 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.49
ATG4A-201ENST00000343524 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
ATG4A-201ENST00000343524 RMI2Q96E14 147 aa5.77□□□□□ -1.49
ATG4A-201ENST00000343524 A0A0U1RQV1 116 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 K7EQG2 157 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 CCL18P55774 89 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 CDSNQ15517 529 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 Q8N814 137 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 ANK2Q01484 3957 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 PKD1L1Q8TDX9 2849 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 INAFM1C9JVW0 142 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 K7EQD1 137 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 EDN2P20800 178 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 SNURFQ9Y675 71 aa5.76□□□□□ -1.49
ATG4A-201ENST00000343524 TRBV7-4A0A0J9YYF1 115 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 ZNF561-AS1K7EIQ3 104 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 IGKV3-20P01619 116 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 LINC01547P58512 204 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-201ENST00000343524 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 ESRGQ1W209 222 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 C11orf44Q8N8P7 122 aa5.75□□□□□ -1.49
ATG4A-201ENST00000343524 IGHV3-38A0A0C4DH36 116 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 UBE2L6O14933 153 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 PROK1P58294 105 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 CDC42SE2Q9NRR3 84 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 IGHV3-11P01762 117 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 SLPIP03973 132 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 Q6ZQT0 140 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 LINC00474Q9P2X8 69 aa5.74□□□□□ -1.49
ATG4A-201ENST00000343524 CUBNO60494 3623 aa5.73□□□□□ -1.49
ATG4A-201ENST00000343524 Q6ZRU5 148 aa5.73□□□□□ -1.49
ATG4A-201ENST00000343524 C11orf72Q8NBR9 251 aa5.73□□□□□ -1.49
ATG4A-201ENST00000343524 HIVEP2P31629 2446 aa5.73□□□□□ -1.49
ATG4A-201ENST00000343524 TGP01266 2768 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 A8MTW9 85 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 HAMPP81172 84 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 NREPQ16612 68 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 Q6ZVQ6 151 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 TMEM254Q8TBM7 123 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 NOTCH1P46531 2555 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 PRYO14603 147 aa5.72□□□□□ -1.49
ATG4A-201ENST00000343524 ZFP36P26651 326 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms