RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 COL5A1P20908 1838 aaPredicted RBP8.75□□□□□ -1.01
SEMA6A-202ENST00000343348 H0Y9P7 68 aa8.75□□□□□ -1.01
SEMA6A-202ENST00000343348 LTBP2Q14767 1821 aa8.75□□□□□ -1.01
SEMA6A-202ENST00000343348 HIVEP3Q5T1R4 2406 aa8.74□□□□□ -1.01
SEMA6A-202ENST00000343348 IGLV1-40P01703 118 aa8.74□□□□□ -1.01
SEMA6A-202ENST00000343348 RPL28P46779 137 aaKnown RBP8.74□□□□□ -1.01
SEMA6A-202ENST00000343348 BDP1A6H8Y1 2624 aa8.74□□□□□ -1.01
SEMA6A-202ENST00000343348 CDSNQ15517 529 aa8.73□□□□□ -1.01
SEMA6A-202ENST00000343348 Q6ZSN1 163 aa8.73□□□□□ -1.01
SEMA6A-202ENST00000343348 Q9BRP9 147 aa8.73□□□□□ -1.01
SEMA6A-202ENST00000343348 PLA2G2AP14555 144 aa8.72□□□□□ -1.01
SEMA6A-202ENST00000343348 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
SEMA6A-202ENST00000343348 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
SEMA6A-202ENST00000343348 PTPRBP23467 1997 aa8.71□□□□□ -1.01
SEMA6A-202ENST00000343348 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.01
SEMA6A-202ENST00000343348 AVPP01185 164 aa8.71□□□□□ -1.01
SEMA6A-202ENST00000343348 ANKHD1Q8IWZ3 2542 aaKnown RBP8.71□□□□□ -1.01
SEMA6A-202ENST00000343348 A0A087WSZ3 146 aa8.71□□□□□ -1.02
SEMA6A-202ENST00000343348 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
SEMA6A-202ENST00000343348 FSTL3O95633 263 aa8.71□□□□□ -1.02
SEMA6A-202ENST00000343348 LINC00846Q9NV44 126 aa8.69□□□□□ -1.02
SEMA6A-202ENST00000343348 ODF3L2Q3SX64 289 aa8.69□□□□□ -1.02
SEMA6A-202ENST00000343348 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
SEMA6A-202ENST00000343348 C2CD3Q4AC94 2353 aa8.69□□□□□ -1.02
SEMA6A-202ENST00000343348 ADAMTS20P59510 1910 aa8.69□□□□□ -1.02
SEMA6A-202ENST00000343348 EGFEM1PQ0D2K5 195 aa8.68□□□□□ -1.02
SEMA6A-202ENST00000343348 FHL2Q14192 279 aa8.68□□□□□ -1.02
SEMA6A-202ENST00000343348 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
SEMA6A-202ENST00000343348 Q6ZTC4 211 aa8.67□□□□□ -1.02
SEMA6A-202ENST00000343348 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
SEMA6A-202ENST00000343348 PRLHP81277 87 aa8.66□□□□□ -1.02
SEMA6A-202ENST00000343348 A0A096LNJ9 63 aa8.66□□□□□ -1.02
SEMA6A-202ENST00000343348 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
SEMA6A-202ENST00000343348 NUPR2A6NF83 97 aa8.65□□□□□ -1.03
SEMA6A-202ENST00000343348 AMELXQ99217 191 aa8.64□□□□□ -1.03
SEMA6A-202ENST00000343348 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
SEMA6A-202ENST00000343348 NOTCH2Q04721 2471 aa8.62□□□□□ -1.03
SEMA6A-202ENST00000343348 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
SEMA6A-202ENST00000343348 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
SEMA6A-202ENST00000343348 MUC7Q8TAX7 377 aa8.62□□□□□ -1.03
SEMA6A-202ENST00000343348 C1orf64Q8NEQ6 169 aa8.62□□□□□ -1.03
SEMA6A-202ENST00000343348 C4orf26Q17RF5 130 aa8.61□□□□□ -1.03
SEMA6A-202ENST00000343348 CUL9Q8IWT3 2517 aa8.61□□□□□ -1.03
SEMA6A-202ENST00000343348 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
SEMA6A-202ENST00000343348 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
SEMA6A-202ENST00000343348 ACACBO00763 2458 aa8.61□□□□□ -1.03
SEMA6A-202ENST00000343348 Q6ZRU5 148 aa8.61□□□□□ -1.03
SEMA6A-202ENST00000343348 ABCA2Q9BZC7 2435 aa8.6□□□□□ -1.03
SEMA6A-202ENST00000343348 KRTAP10-9P60411 292 aa8.6□□□□□ -1.03
SEMA6A-202ENST00000343348 C7orf65Q6ZTY9 151 aa8.6□□□□□ -1.03
SEMA6A-202ENST00000343348 KIAA0087Q14695 138 aa8.58□□□□□ -1.04
SEMA6A-202ENST00000343348 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
SEMA6A-202ENST00000343348 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
SEMA6A-202ENST00000343348 IGLV1-51P01701 117 aa8.57□□□□□ -1.04
SEMA6A-202ENST00000343348 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
SEMA6A-202ENST00000343348 SMCR5Q8TEV8 140 aa8.56□□□□□ -1.04
SEMA6A-202ENST00000343348 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
SEMA6A-202ENST00000343348 MUC22E2RYF6 1773 aaPredicted RBP8.56□□□□□ -1.04
SEMA6A-202ENST00000343348 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
SEMA6A-202ENST00000343348 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
SEMA6A-202ENST00000343348 SERTAD4-AS1Q5TG53 156 aa8.55□□□□□ -1.04
SEMA6A-202ENST00000343348 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
SEMA6A-202ENST00000343348 A0A1B0GU69 56 aa8.54□□□□□ -1.04
SEMA6A-202ENST00000343348 SPATA3Q8NHX4 192 aa8.54□□□□□ -1.04
SEMA6A-202ENST00000343348 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
SEMA6A-202ENST00000343348 WDR87Q6ZQQ6 2873 aa8.53□□□□□ -1.04
SEMA6A-202ENST00000343348 PIEZO2Q9H5I5 2752 aa8.53□□□□□ -1.04
SEMA6A-202ENST00000343348 CXCL6P80162 114 aa8.53□□□□□ -1.04
SEMA6A-202ENST00000343348 CACNA1AO00555 2505 aa8.53□□□□□ -1.04
SEMA6A-202ENST00000343348 Q8N2B8 174 aa8.52□□□□□ -1.05
SEMA6A-202ENST00000343348 FSHBP01225 129 aa8.51□□□□□ -1.05
SEMA6A-202ENST00000343348 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
SEMA6A-202ENST00000343348 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
SEMA6A-202ENST00000343348 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
SEMA6A-202ENST00000343348 PRO0628Q9UI54 55 aa8.5□□□□□ -1.05
SEMA6A-202ENST00000343348 MYO18BQ8IUG5 2567 aa8.5□□□□□ -1.05
SEMA6A-202ENST00000343348 FAM218AQ96MZ4 157 aa8.5□□□□□ -1.05
SEMA6A-202ENST00000343348 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
SEMA6A-202ENST00000343348 MOBPQ13875 183 aa8.49□□□□□ -1.05
SEMA6A-202ENST00000343348 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
SEMA6A-202ENST00000343348 A0A1W2PPR1 153 aa8.48□□□□□ -1.05
SEMA6A-202ENST00000343348 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
SEMA6A-202ENST00000343348 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
SEMA6A-202ENST00000343348 CCDC168Q8NDH2 2452 aa8.46□□□□□ -1.05
SEMA6A-202ENST00000343348 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
SEMA6A-202ENST00000343348 ACYP2P14621 99 aa8.45□□□□□ -1.06
SEMA6A-202ENST00000343348 TTC28Q96AY4 2481 aa8.45□□□□□ -1.06
SEMA6A-202ENST00000343348 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
SEMA6A-202ENST00000343348 LINC00167Q96N53 147 aa8.44□□□□□ -1.06
SEMA6A-202ENST00000343348 COL27A1Q8IZC6 1860 aaPredicted RBP8.44□□□□□ -1.06
SEMA6A-202ENST00000343348 KIF25-AS1Q9Y6Z4 181 aa8.44□□□□□ -1.06
SEMA6A-202ENST00000343348 SPINT4Q6UDR6 99 aa8.43□□□□□ -1.06
SEMA6A-202ENST00000343348 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
SEMA6A-202ENST00000343348 ATP11AUNQ6ZP68 121 aa8.42□□□□□ -1.06
SEMA6A-202ENST00000343348 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
SEMA6A-202ENST00000343348 LINC01561Q8N1V8 128 aa8.41□□□□□ -1.06
SEMA6A-202ENST00000343348 F8WDY8 70 aa8.41□□□□□ -1.06
SEMA6A-202ENST00000343348 C11orf72Q8NBR9 251 aa8.41□□□□□ -1.06
SEMA6A-202ENST00000343348 PHF5AQ7RTV0 110 aaKnown RBP8.41□□□□□ -1.06
SEMA6A-202ENST00000343348 C16orf95Q9H693 158 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms