RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 DNAH12Q6ZR08 3092 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 Q0VFX4 171 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 C11orf53Q8IXP5 236 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 EDN2P20800 178 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 RITA1Q96K30 269 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 A0A1B0GW54 56 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 Q6ZTC4 211 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 IL17DQ8TAD2 202 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 Q6ZSR3 168 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 SSBP3-AS1Q7Z2R9 100 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 ERC2-IT1O76042 136 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 IGHV6-1A0A0B4J1U7 121 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 H3BPC8 53 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 COL4A6Q14031 1691 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 DEFB135Q30KP9 77 aa4.55□□□□□ -1.68
VCAN-203ENST00000343200 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
VCAN-203ENST00000343200 A6NDX4 124 aa4.54□□□□□ -1.68
VCAN-203ENST00000343200 PRSS33Q8NF86 280 aa4.54□□□□□ -1.68
VCAN-203ENST00000343200 A0A096LNI7 61 aa4.54□□□□□ -1.68
VCAN-203ENST00000343200 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
VCAN-203ENST00000343200 PRLHP81277 87 aa4.54□□□□□ -1.68
VCAN-203ENST00000343200 LY6LH3BQJ8 138 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 RSPO1Q2MKA7 263 aaPredicted RBP4.53□□□□□ -1.68
VCAN-203ENST00000343200 ITGBL1O95965 494 aaPredicted RBP4.53□□□□□ -1.68
VCAN-203ENST00000343200 REG3GQ6UW15 175 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 CHD7Q9P2D1 2997 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 SBSPONQ8IVN8 264 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 CTSZQ9UBR2 303 aa4.53□□□□□ -1.68
VCAN-203ENST00000343200 CEP350Q5VT06 3117 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 IGLV4-69A0A075B6H9 119 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 RNF223E7ERA6 249 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 EPOPA6NHQ4 379 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 WIPF1O43516 503 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 SPINK1P00995 79 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 LCA10Q71F78 164 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 H3BS24 57 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 FAM19A4Q96LR4 140 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 IGSF10Q6WRI0 2623 aa4.52□□□□□ -1.69
VCAN-203ENST00000343200 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 PLA2G1BP04054 148 aaKnown RBP4.51□□□□□ -1.69
VCAN-203ENST00000343200 ODF3L1Q8IXM7 274 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 IGIPA6NJ69 53 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 ZNF503-AS2A6NEH8 195 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 SPRNQ5BIV9 151 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 TRAV10A0A0B4J240 114 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 CRIP1P50238 77 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 KPRPQ5T749 579 aaPredicted RBP4.51□□□□□ -1.69
VCAN-203ENST00000343200 TACC2O95359 2948 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 COL4A3Q01955 1670 aa4.51□□□□□ -1.69
VCAN-203ENST00000343200 ELOF1P60002 83 aaKnown RBP4.51□□□□□ -1.69
VCAN-203ENST00000343200 E7EUB6 86 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 LINC00310P59036 64 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 MAP6D1Q9H9H5 199 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 TRAV22A0A0B4J277 110 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 LINC01561Q8N1V8 128 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 CFAP54Q96N23 3096 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 RPL37AP8A6NKH3 93 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 SMIM29Q86T20 159 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 TNFRSF13BO14836 293 aaPredicted RBP4.5□□□□□ -1.69
VCAN-203ENST00000343200 UNQ9165/PRO28630Q6UXU0 137 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 Q6ZTI0 123 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 Q9UF83 564 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 ADAMTSL4-AS1Q5T5F5 129 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 LINC00574Q9H8X3 128 aa4.5□□□□□ -1.69
VCAN-203ENST00000343200 C9orf116Q5BN46 136 aaPredicted RBP4.49□□□□□ -1.69
VCAN-203ENST00000343200 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.49□□□□□ -1.69
VCAN-203ENST00000343200 NHLRC4P0CG21 123 aaPredicted RBP4.49□□□□□ -1.69
VCAN-203ENST00000343200 MRGPRG-AS1Q2M3A8 158 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 IGFL3Q6UXB1 125 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 LINC00336Q6ZUF6 198 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 VWCEQ96DN2 955 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 ZNF702PQ9H963 129 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 LOC110117498A0A087WWA1 95 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 UQCR11O14957 56 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 FHL2Q14192 279 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 Q96MF0 132 aa4.49□□□□□ -1.69
VCAN-203ENST00000343200 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
VCAN-203ENST00000343200 C11orf45Q8TAV5 145 aa4.48□□□□□ -1.69
VCAN-203ENST00000343200 ZNF295-AS1Q8N0V1 137 aa4.48□□□□□ -1.69
VCAN-203ENST00000343200 POLR2KP53803 58 aaKnown RBP4.48□□□□□ -1.69
VCAN-203ENST00000343200 KLLNB2CW77 178 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 MSMPQ1L6U9 139 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 DEFB4AO15263 64 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 Q9BRP9 147 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 LINC01548A6NM66 108 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 FRYLO94915 3013 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 CIRBP-AS1Q8TBR5 109 aa4.47□□□□□ -1.69
VCAN-203ENST00000343200 LAMA2P24043 3122 aaKnown RBP4.46□□□□□ -1.69
VCAN-203ENST00000343200 TSPEAR-AS2P59090 65 aa4.46□□□□□ -1.69
VCAN-203ENST00000343200 LOC101927531A0A1B0GV80 90 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 CDC42SE2Q9NRR3 84 aa4.46□□□□□ -1.7
VCAN-203ENST00000343200 PRO0461Q9UI25 63 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 391.5 ms