RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 UNQ6190/PRO20217Q6UXQ8 127 aa9.14□□□□□ -0.95
PMS1-201ENST00000342075 SCGB1D4Q6XE38 83 aa9.14□□□□□ -0.95
PMS1-201ENST00000342075 PRSS2P07478 247 aa9.13□□□□□ -0.95
PMS1-201ENST00000342075 RYR2Q92736 4967 aa9.13□□□□□ -0.95
PMS1-201ENST00000342075 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
PMS1-201ENST00000342075 HNRNPA3P51991 378 aaKnown RBP9.13□□□□□ -0.95
PMS1-201ENST00000342075 NPC2P61916 151 aa9.13□□□□□ -0.95
PMS1-201ENST00000342075 CTAG1AP78358 180 aa9.13□□□□□ -0.95
PMS1-201ENST00000342075 Q8IZM0 81 aa9.13□□□□□ -0.95
PMS1-201ENST00000342075 DNAH17Q9UFH2 4485 aa9.12□□□□□ -0.95
PMS1-201ENST00000342075 NDUFA1O15239 70 aa9.12□□□□□ -0.95
PMS1-201ENST00000342075 SLPIP03973 132 aa9.12□□□□□ -0.95
PMS1-201ENST00000342075 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
PMS1-201ENST00000342075 LINC00587B1AMM8 73 aa9.12□□□□□ -0.95
PMS1-201ENST00000342075 K7EP13 123 aa9.12□□□□□ -0.95
PMS1-201ENST00000342075 FAT2Q9NYQ8 4349 aa9.11□□□□□ -0.95
PMS1-201ENST00000342075 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
PMS1-201ENST00000342075 APOMO95445 188 aa9.11□□□□□ -0.95
PMS1-201ENST00000342075 CKS1BP61024 79 aa9.11□□□□□ -0.95
PMS1-201ENST00000342075 CFAP161Q6P656 301 aa9.11□□□□□ -0.95
PMS1-201ENST00000342075 RMI2Q96E14 147 aa9.11□□□□□ -0.95
PMS1-201ENST00000342075 PFN2P35080 140 aa9.1□□□□□ -0.95
PMS1-201ENST00000342075 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.1□□□□□ -0.95
PMS1-201ENST00000342075 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
PMS1-201ENST00000342075 DLEU1O43261 78 aa9.1□□□□□ -0.95
PMS1-201ENST00000342075 SMIM13P0DJ93 91 aa9.1□□□□□ -0.95
PMS1-201ENST00000342075 NTN5Q8WTR8 489 aaPredicted RBP9.1□□□□□ -0.95
PMS1-201ENST00000342075 LITAFQ99732 161 aa9.1□□□□□ -0.95
PMS1-201ENST00000342075 Q6ZRU5 148 aa9.09□□□□□ -0.95
PMS1-201ENST00000342075 LINC01561Q8N1V8 128 aa9.09□□□□□ -0.95
PMS1-201ENST00000342075 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
PMS1-201ENST00000342075 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
PMS1-201ENST00000342075 C6orf48Q9UBA6 75 aa9.08□□□□□ -0.96
PMS1-201ENST00000342075 RYR3Q15413 4870 aa9.08□□□□□ -0.96
PMS1-201ENST00000342075 GVQW2A0A096LPI5 108 aaPredicted RBP9.08□□□□□ -0.96
PMS1-201ENST00000342075 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
PMS1-201ENST00000342075 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
PMS1-201ENST00000342075 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
PMS1-201ENST00000342075 HINT1P49773 126 aaPredicted RBP9.07□□□□□ -0.96
PMS1-201ENST00000342075 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
PMS1-201ENST00000342075 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
PMS1-201ENST00000342075 COX11Q9Y6N1 276 aa9.06□□□□□ -0.96
PMS1-201ENST00000342075 BATFQ16520 125 aa9.05□□□□□ -0.96
PMS1-201ENST00000342075 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
PMS1-201ENST00000342075 ERG28Q9UKR5 140 aa9.05□□□□□ -0.96
PMS1-201ENST00000342075 LCE6AA0A183 80 aa9.05□□□□□ -0.96
PMS1-201ENST00000342075 RTL8CO15255 209 aa9.05□□□□□ -0.96
PMS1-201ENST00000342075 LINC00158P58513 81 aa9.04□□□□□ -0.96
PMS1-201ENST00000342075 TNP2Q05952 138 aa9.04□□□□□ -0.96
PMS1-201ENST00000342075 SRSF9Q13242 221 aaKnown RBP eCLIP9.04□□□□□ -0.96
PMS1-201ENST00000342075 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
PMS1-201ENST00000342075 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
PMS1-201ENST00000342075 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 PKD1P98161 4303 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 EREGO14944 169 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 GCSHP23434 173 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 FXYD2P54710 66 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 SYCNQ0VAF6 134 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 HIGD1BQ9P298 99 aa9.03□□□□□ -0.96
PMS1-201ENST00000342075 HERV-K104P63124 156 aa9.02□□□□□ -0.97
PMS1-201ENST00000342075 A0A087WTM6 91 aa9.02□□□□□ -0.97
PMS1-201ENST00000342075 MUSTN1Q8IVN3 82 aa9.02□□□□□ -0.97
PMS1-201ENST00000342075 CXCL5P42830 114 aa9.01□□□□□ -0.97
PMS1-201ENST00000342075 SNHG12Q9BXW3 62 aa9.01□□□□□ -0.97
PMS1-201ENST00000342075 DNAH5Q8TE73 4624 aa9.01□□□□□ -0.97
PMS1-201ENST00000342075 CARD19Q96LW7 228 aa9.01□□□□□ -0.97
PMS1-201ENST00000342075 XAGE1AQ9HD64 81 aa9.01□□□□□ -0.97
PMS1-201ENST00000342075 TMEM238C9JI98 176 aa9□□□□□ -0.97
PMS1-201ENST00000342075 BVES-AS1Q5T3Y7 98 aa9□□□□□ -0.97
PMS1-201ENST00000342075 Q8NDZ9 215 aa9□□□□□ -0.97
PMS1-201ENST00000342075 C2orf48Q96LS8 159 aa9□□□□□ -0.97
PMS1-201ENST00000342075 Q8N814 137 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 HSD52Q0P140 79 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 Q6ZRP5 223 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 CEND1Q8N111 149 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 K7ERJ3 54 aa8.99□□□□□ -0.97
PMS1-201ENST00000342075 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
PMS1-201ENST00000342075 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
PMS1-201ENST00000342075 CIRBPQ14011 172 aaKnown RBP8.98□□□□□ -0.97
PMS1-201ENST00000342075 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
PMS1-201ENST00000342075 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
PMS1-201ENST00000342075 SPANXCQ9NY87 97 aa8.97□□□□□ -0.97
PMS1-201ENST00000342075 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
PMS1-201ENST00000342075 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
PMS1-201ENST00000342075 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
PMS1-201ENST00000342075 TIMM17BO60830 172 aa8.97□□□□□ -0.97
PMS1-201ENST00000342075 A4D1N5 150 aa8.96□□□□□ -0.97
PMS1-201ENST00000342075 Q6ZVH6 145 aa8.96□□□□□ -0.98
PMS1-201ENST00000342075 PTTG1IPP53801 180 aa8.95□□□□□ -0.98
PMS1-201ENST00000342075 KRTAP10-2P60368 255 aa8.95□□□□□ -0.98
PMS1-201ENST00000342075 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
PMS1-201ENST00000342075 NHP2Q9NX24 153 aaKnown RBP8.95□□□□□ -0.98
PMS1-201ENST00000342075 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
PMS1-201ENST00000342075 GAGE2BQ13066 116 aa8.94□□□□□ -0.98
PMS1-201ENST00000342075 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
PMS1-201ENST00000342075 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
PMS1-201ENST00000342075 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
PMS1-201ENST00000342075 IGKV2-24A0A0C4DH68 120 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms