RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 SCGB1D4Q6XE38 83 aa12.74□□□□□ -0.37
GTF3C5-201ENST00000342018 NDUFA1O15239 70 aa12.74□□□□□ -0.37
GTF3C5-201ENST00000342018 GVQW2A0A096LPI5 108 aaPredicted RBP12.72□□□□□ -0.37
GTF3C5-201ENST00000342018 MIEN1Q9BRT3 115 aa12.72□□□□□ -0.37
GTF3C5-201ENST00000342018 UNQ6190/PRO20217Q6UXQ8 127 aa12.71□□□□□ -0.37
GTF3C5-201ENST00000342018 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.37
GTF3C5-201ENST00000342018 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.37
GTF3C5-201ENST00000342018 DLEU1O43261 78 aa12.7□□□□□ -0.38
GTF3C5-201ENST00000342018 C10orf25Q5T742 122 aa12.7□□□□□ -0.38
GTF3C5-201ENST00000342018 A0A0J9YXY3 114 aa12.7□□□□□ -0.38
GTF3C5-201ENST00000342018 A0A0U1RRA0 63 aa12.7□□□□□ -0.38
GTF3C5-201ENST00000342018 CXCL5P42830 114 aa12.7□□□□□ -0.38
GTF3C5-201ENST00000342018 MEIG1Q5JSS6 88 aa12.69□□□□□ -0.38
GTF3C5-201ENST00000342018 HNRNPA3P51991 378 aaKnown RBP12.68□□□□□ -0.38
GTF3C5-201ENST00000342018 HYDINQ4G0P3 5121 aa12.68□□□□□ -0.38
GTF3C5-201ENST00000342018 DNAH6Q9C0G6 4158 aa12.68□□□□□ -0.38
GTF3C5-201ENST00000342018 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
GTF3C5-201ENST00000342018 HERV-K104P63124 156 aa12.68□□□□□ -0.38
GTF3C5-201ENST00000342018 C2orf91Q6ZV80 131 aa12.68□□□□□ -0.38
GTF3C5-201ENST00000342018 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.67□□□□□ -0.38
GTF3C5-201ENST00000342018 C9orf116Q5BN46 136 aaPredicted RBP12.67□□□□□ -0.38
GTF3C5-201ENST00000342018 Q6ZRU5 148 aa12.66□□□□□ -0.38
GTF3C5-201ENST00000342018 C2orf48Q96LS8 159 aa12.66□□□□□ -0.38
GTF3C5-201ENST00000342018 PFN2P35080 140 aa12.66□□□□□ -0.38
GTF3C5-201ENST00000342018 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
GTF3C5-201ENST00000342018 SYCNQ0VAF6 134 aa12.65□□□□□ -0.38
GTF3C5-201ENST00000342018 SLPIP03973 132 aa12.64□□□□□ -0.39
GTF3C5-201ENST00000342018 SMIM13P0DJ93 91 aa12.64□□□□□ -0.39
GTF3C5-201ENST00000342018 C14orf177Q52M58 125 aa12.64□□□□□ -0.39
GTF3C5-201ENST00000342018 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
GTF3C5-201ENST00000342018 A0A087WTM6 91 aa12.64□□□□□ -0.39
GTF3C5-201ENST00000342018 LINC00158P58513 81 aa12.63□□□□□ -0.39
GTF3C5-201ENST00000342018 DAND5Q8N907 189 aa12.63□□□□□ -0.39
GTF3C5-201ENST00000342018 CARD19Q96LW7 228 aa12.63□□□□□ -0.39
GTF3C5-201ENST00000342018 ERG28Q9UKR5 140 aa12.63□□□□□ -0.39
GTF3C5-201ENST00000342018 DNAH2Q9P225 4427 aa12.63□□□□□ -0.39
GTF3C5-201ENST00000342018 RTL8CO15255 209 aa12.62□□□□□ -0.39
GTF3C5-201ENST00000342018 CIRBPQ14011 172 aaKnown RBP12.62□□□□□ -0.39
GTF3C5-201ENST00000342018 TNP2Q05952 138 aa12.62□□□□□ -0.39
GTF3C5-201ENST00000342018 ADAMTSL4-AS1Q5T5F5 129 aa12.62□□□□□ -0.39
GTF3C5-201ENST00000342018 SACSQ9NZJ4 4579 aa12.61□□□□□ -0.39
GTF3C5-201ENST00000342018 HIGD1BQ9P298 99 aa12.61□□□□□ -0.39
GTF3C5-201ENST00000342018 TMEM238C9JI98 176 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 NPC2P61916 151 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 SRSF9Q13242 221 aaKnown RBP eCLIP12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 Q8N814 137 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 LITAFQ99732 161 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 TRBV30A0A0K0K1B3 111 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 F8WDY8 70 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
GTF3C5-201ENST00000342018 LBHQ53QV2 105 aaPredicted RBP12.59□□□□□ -0.39
GTF3C5-201ENST00000342018 TIMM17BO60830 172 aa12.58□□□□□ -0.4
GTF3C5-201ENST00000342018 FUSP35637 526 aaKnown RBP eCLIP12.58□□□□□ -0.4
GTF3C5-201ENST00000342018 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
GTF3C5-201ENST00000342018 EREGO14944 169 aa12.57□□□□□ -0.4
GTF3C5-201ENST00000342018 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.56□□□□□ -0.4
GTF3C5-201ENST00000342018 SNHG12Q9BXW3 62 aa12.56□□□□□ -0.4
GTF3C5-201ENST00000342018 KMT2CQ8NEZ4 4911 aaKnown RBP12.55□□□□□ -0.4
GTF3C5-201ENST00000342018 CNBPP62633 177 aaKnown RBP12.55□□□□□ -0.4
GTF3C5-201ENST00000342018 COX17Q14061 63 aa12.55□□□□□ -0.4
GTF3C5-201ENST00000342018 SPANXB1Q9NS25 103 aaPredicted RBP12.55□□□□□ -0.4
GTF3C5-201ENST00000342018 GCSHP23434 173 aa12.54□□□□□ -0.4
GTF3C5-201ENST00000342018 SPANXDQ9BXN6 97 aa12.54□□□□□ -0.4
GTF3C5-201ENST00000342018 SPANXCQ9NY87 97 aa12.54□□□□□ -0.4
GTF3C5-201ENST00000342018 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
GTF3C5-201ENST00000342018 RPL18AQ02543 176 aaKnown RBP12.53□□□□□ -0.4
GTF3C5-201ENST00000342018 HSD52Q0P140 79 aa12.53□□□□□ -0.4
GTF3C5-201ENST00000342018 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
GTF3C5-201ENST00000342018 M0R143 59 aa12.52□□□□□ -0.4
GTF3C5-201ENST00000342018 GAGE2EQ4V326 116 aa12.52□□□□□ -0.4
GTF3C5-201ENST00000342018 MUSTN1Q8IVN3 82 aa12.52□□□□□ -0.4
GTF3C5-201ENST00000342018 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.4
GTF3C5-201ENST00000342018 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.41
GTF3C5-201ENST00000342018 HINT1P49773 126 aaPredicted RBP12.52□□□□□ -0.41
GTF3C5-201ENST00000342018 A0A1B0GV90 55 aa12.51□□□□□ -0.41
GTF3C5-201ENST00000342018 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
GTF3C5-201ENST00000342018 RNF151Q2KHN1 245 aa12.51□□□□□ -0.41
GTF3C5-201ENST00000342018 Q6ZRP5 223 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 CEND1Q8N111 149 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 LINC00308Q8TCZ7 52 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 XAGE1AQ9HD64 81 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 TAL2Q16559 108 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 SOSTDC1Q6X4U4 206 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 SND1-IT1Q9HBX3 110 aa12.5□□□□□ -0.41
GTF3C5-201ENST00000342018 BATFQ16520 125 aa12.49□□□□□ -0.41
GTF3C5-201ENST00000342018 Q6ZVH6 145 aa12.49□□□□□ -0.41
GTF3C5-201ENST00000342018 RYR2Q92736 4967 aa12.49□□□□□ -0.41
GTF3C5-201ENST00000342018 DNAH17Q9UFH2 4485 aa12.49□□□□□ -0.41
GTF3C5-201ENST00000342018 GAGE2BQ13066 116 aa12.49□□□□□ -0.41
GTF3C5-201ENST00000342018 IGLV5-52A0A0A0MRZ9 124 aa12.47□□□□□ -0.41
GTF3C5-201ENST00000342018 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
GTF3C5-201ENST00000342018 PTTG1IPP53801 180 aa12.47□□□□□ -0.41
GTF3C5-201ENST00000342018 FXYD2P54710 66 aa12.47□□□□□ -0.41
GTF3C5-201ENST00000342018 C9orf163Q8N9P6 203 aa12.47□□□□□ -0.41
GTF3C5-201ENST00000342018 IFITM1P13164 125 aa12.47□□□□□ -0.41
GTF3C5-201ENST00000342018 BVES-AS1Q5T3Y7 98 aa12.46□□□□□ -0.42
GTF3C5-201ENST00000342018 TLX1NBP0CAT3 122 aa12.45□□□□□ -0.42
GTF3C5-201ENST00000342018 KRTAP10-2P60368 255 aa12.45□□□□□ -0.42
GTF3C5-201ENST00000342018 RPL24P83731 157 aaKnown RBP12.45□□□□□ -0.42
GTF3C5-201ENST00000342018 COPS9Q8WXC6 57 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms