RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
CDK11B-201ENST00000340677 CSPG4Q6UVK1 2322 aa11.97□□□□□ -0.49
CDK11B-201ENST00000340677 IGHV3OR16-8A0A075B7F1 116 aa11.97□□□□□ -0.49
CDK11B-201ENST00000340677 G3V318 75 aa11.96□□□□□ -0.49
CDK11B-201ENST00000340677 PRYO14603 147 aa11.96□□□□□ -0.49
CDK11B-201ENST00000340677 CTSGP08311 255 aa11.96□□□□□ -0.49
CDK11B-201ENST00000340677 UBE2AP49459 152 aa11.96□□□□□ -0.49
CDK11B-201ENST00000340677 Q5VV11 94 aa11.96□□□□□ -0.5
CDK11B-201ENST00000340677 USMG5Q96IX5 58 aa11.95□□□□□ -0.5
CDK11B-201ENST00000340677 NDUFA12Q9UI09 145 aa11.95□□□□□ -0.5
CDK11B-201ENST00000340677 NOTCH2Q04721 2471 aa11.95□□□□□ -0.5
CDK11B-201ENST00000340677 PDZD2O15018 2839 aa11.94□□□□□ -0.5
CDK11B-201ENST00000340677 KRTAP1-1Q07627 177 aa11.94□□□□□ -0.5
CDK11B-201ENST00000340677 HCG22E2RYF7 251 aa11.93□□□□□ -0.5
CDK11B-201ENST00000340677 IGLV1-40P01703 118 aa11.93□□□□□ -0.5
CDK11B-201ENST00000340677 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
CDK11B-201ENST00000340677 C11orf72Q8NBR9 251 aa11.92□□□□□ -0.5
CDK11B-201ENST00000340677 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
CDK11B-201ENST00000340677 UBL5Q9BZL1 73 aa11.92□□□□□ -0.5
CDK11B-201ENST00000340677 IGKV3D-20A0A0C4DH25 116 aa11.92□□□□□ -0.5
CDK11B-201ENST00000340677 IGHV7-4-1A0A0J9YVY3 117 aa11.92□□□□□ -0.5
CDK11B-201ENST00000340677 SPANXN1Q5VSR9 72 aa11.92□□□□□ -0.5
CDK11B-201ENST00000340677 A0A0A0MQY5 61 aa11.91□□□□□ -0.5
CDK11B-201ENST00000340677 TRAV21A0A0B4J279 112 aa11.91□□□□□ -0.5
CDK11B-201ENST00000340677 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
CDK11B-201ENST00000340677 ERC2-IT1O76042 136 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 NREPQ16612 68 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 LINC01554Q52M75 96 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 C1orf64Q8NEQ6 169 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 KIF25-AS1Q9Y6Z4 181 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 TEP1Q99973 2627 aaKnown RBP11.9□□□□□ -0.5
CDK11B-201ENST00000340677 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 IGHV1OR15-1A0A075B7D0 117 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 LINC00337Q8N6G1 96 aa11.9□□□□□ -0.5
CDK11B-201ENST00000340677 ITPR2Q14571 2701 aa11.89□□□□□ -0.51
CDK11B-201ENST00000340677 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
CDK11B-201ENST00000340677 MIR7-3HGQ8N6C7 128 aa11.89□□□□□ -0.51
CDK11B-201ENST00000340677 PDE6HQ13956 83 aa11.89□□□□□ -0.51
CDK11B-201ENST00000340677 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 A0A087WYN8 130 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 SMAD5-AS1Q9Y6J3 95 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 PRAC2D3DTV9 90 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 C9orf47Q6ZRZ4 202 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 ZNF702PQ9H963 129 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 C11orf21Q9P2W6 132 aa11.88□□□□□ -0.51
CDK11B-201ENST00000340677 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
CDK11B-201ENST00000340677 CHKB-CPT1BH3BT56 60 aa11.87□□□□□ -0.51
CDK11B-201ENST00000340677 RNASE13Q5GAN3 156 aaKnown RBP11.86□□□□□ -0.51
CDK11B-201ENST00000340677 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
CDK11B-201ENST00000340677 K7EQG2 157 aa11.86□□□□□ -0.51
CDK11B-201ENST00000340677 IGHV3-66A0A0C4DH42 116 aa11.85□□□□□ -0.51
CDK11B-201ENST00000340677 Q8N3U1 123 aa11.85□□□□□ -0.51
CDK11B-201ENST00000340677 GNRH2O43555 120 aa11.84□□□□□ -0.51
CDK11B-201ENST00000340677 IGHV3OR16-13A0A075B7E8 117 aa11.84□□□□□ -0.51
CDK11B-201ENST00000340677 IGHV3-74A0A0B4J1X5 117 aa11.84□□□□□ -0.51
CDK11B-201ENST00000340677 NDUFA4O00483 81 aa11.84□□□□□ -0.51
CDK11B-201ENST00000340677 ZANQ9Y493 2812 aa11.83□□□□□ -0.51
CDK11B-201ENST00000340677 CSMD2Q7Z408 3487 aa11.83□□□□□ -0.52
CDK11B-201ENST00000340677 LINC01547P58512 204 aaPredicted RBP11.83□□□□□ -0.52
CDK11B-201ENST00000340677 MAP1AP78559 2803 aaPredicted RBP11.83□□□□□ -0.52
CDK11B-201ENST00000340677 MP68P56378 58 aa11.82□□□□□ -0.52
CDK11B-201ENST00000340677 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
CDK11B-201ENST00000340677 PSCAO43653 123 aa11.82□□□□□ -0.52
CDK11B-201ENST00000340677 MGPP08493 103 aa11.82□□□□□ -0.52
CDK11B-201ENST00000340677 FLNAP21333 2647 aaKnown RBP11.81□□□□□ -0.52
CDK11B-201ENST00000340677 CCDC168Q8NDH2 2452 aa11.81□□□□□ -0.52
CDK11B-201ENST00000340677 C2CD3Q4AC94 2353 aa11.81□□□□□ -0.52
CDK11B-201ENST00000340677 KLLNB2CW77 178 aa11.81□□□□□ -0.52
CDK11B-201ENST00000340677 IGHV3-49A0A0A0MS15 119 aa11.8□□□□□ -0.52
CDK11B-201ENST00000340677 DNAJC9-AS1A6NH13 148 aa11.8□□□□□ -0.52
CDK11B-201ENST00000340677 S100A4P26447 101 aaKnown RBP11.8□□□□□ -0.52
CDK11B-201ENST00000340677 MED14OSP0DP75 135 aa11.79□□□□□ -0.52
CDK11B-201ENST00000340677 CXCL6P80162 114 aa11.79□□□□□ -0.52
CDK11B-201ENST00000340677 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
CDK11B-201ENST00000340677 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
CDK11B-201ENST00000340677 PPP1R17O96001 155 aa11.78□□□□□ -0.52
CDK11B-201ENST00000340677 Q6ZTI0 123 aa11.78□□□□□ -0.52
CDK11B-201ENST00000340677 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
CDK11B-201ENST00000340677 ORMDL1Q9P0S3 153 aa11.77□□□□□ -0.53
CDK11B-201ENST00000340677 POLR2KP53803 58 aaKnown RBP11.76□□□□□ -0.53
CDK11B-201ENST00000340677 HAMPP81172 84 aa11.76□□□□□ -0.53
CDK11B-201ENST00000340677 IGHV3-11P01762 117 aa11.76□□□□□ -0.53
CDK11B-201ENST00000340677 SLPIP03973 132 aa11.76□□□□□ -0.53
CDK11B-201ENST00000340677 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.76□□□□□ -0.53
CDK11B-201ENST00000340677 HIGD2AQ9BW72 106 aa11.76□□□□□ -0.53
CDK11B-201ENST00000340677 SORL1Q92673 2214 aa11.75□□□□□ -0.53
CDK11B-201ENST00000340677 LECT2O14960 151 aa11.75□□□□□ -0.53
CDK11B-201ENST00000340677 MUC4Q99102 2169 aa11.75□□□□□ -0.53
CDK11B-201ENST00000340677 PRAC1Q96KF2 57 aa11.74□□□□□ -0.53
CDK11B-201ENST00000340677 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
CDK11B-201ENST00000340677 OTOGQ6ZRI0 2925 aa11.74□□□□□ -0.53
CDK11B-201ENST00000340677 LY6G6DO95868 133 aa11.74□□□□□ -0.53
CDK11B-201ENST00000340677 BPY2O14599 106 aa11.73□□□□□ -0.53
CDK11B-201ENST00000340677 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
CDK11B-201ENST00000340677 RPL11P62913 178 aaKnown RBP11.73□□□□□ -0.53
CDK11B-201ENST00000340677 C10orf99Q6UWK7 81 aa11.73□□□□□ -0.53
CDK11B-201ENST00000340677 C18orf65Q6ZTR6 163 aa11.73□□□□□ -0.53
CDK11B-201ENST00000340677 JMJD7-PLA2G4BH0Y9G9 81 aa11.72□□□□□ -0.53
CDK11B-201ENST00000340677 ZNF706Q9Y5V0 76 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms