RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 HERVK_113P61574 105 aa8.86□□□□□ -0.99
GTF2F2-201ENST00000340473 SPCS1Q9Y6A9 102 aa8.86□□□□□ -0.99
GTF2F2-201ENST00000340473 IGHV1-58A0A0C4DH39 117 aa8.86□□□□□ -0.99
GTF2F2-201ENST00000340473 IGLV5-39A0A0G2JS06 123 aa8.86□□□□□ -0.99
GTF2F2-201ENST00000340473 E9PLD3 99 aa8.86□□□□□ -0.99
GTF2F2-201ENST00000340473 DNAH6Q9C0G6 4158 aa8.86□□□□□ -0.99
GTF2F2-201ENST00000340473 MALP21145 153 aa8.85□□□□□ -0.99
GTF2F2-201ENST00000340473 PCP4P48539 62 aa8.85□□□□□ -0.99
GTF2F2-201ENST00000340473 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
GTF2F2-201ENST00000340473 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
GTF2F2-201ENST00000340473 RNF151Q2KHN1 245 aa8.85□□□□□ -0.99
GTF2F2-201ENST00000340473 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
GTF2F2-201ENST00000340473 SACSQ9NZJ4 4579 aa8.84□□□□□ -0.99
GTF2F2-201ENST00000340473 LEPROTO15243 131 aa8.84□□□□□ -0.99
GTF2F2-201ENST00000340473 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
GTF2F2-201ENST00000340473 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
GTF2F2-201ENST00000340473 NHP2Q9NX24 153 aaKnown RBP8.84□□□□□ -0.99
GTF2F2-201ENST00000340473 HIST1H4GQ99525 98 aa8.83□□□□□ -1
GTF2F2-201ENST00000340473 LCE6AA0A183 80 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 J3QQQ9 107 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 C15orf56Q8N910 161 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 VPS25Q9BRG1 176 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 C6orf223Q8N319 242 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 COX7B2Q8TF08 81 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 PLEKHB2Q96CS7 222 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 DNAH2Q9P225 4427 aa8.82□□□□□ -1
GTF2F2-201ENST00000340473 PSCAO43653 123 aa8.81□□□□□ -1
GTF2F2-201ENST00000340473 APOMO95445 188 aa8.81□□□□□ -1
GTF2F2-201ENST00000340473 ZNF815PA8K554 130 aa8.81□□□□□ -1
GTF2F2-201ENST00000340473 K7ERJ3 54 aa8.81□□□□□ -1
GTF2F2-201ENST00000340473 KIAA0087Q14695 138 aa8.81□□□□□ -1
GTF2F2-201ENST00000340473 USP17L23D6RBM5 183 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 LECT2O14960 151 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 LGALS3P17931 250 aaKnown RBP8.8□□□□□ -1
GTF2F2-201ENST00000340473 HIGD2BQ4VC39 106 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
GTF2F2-201ENST00000340473 A0A1B0GWB2 263 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 SPAG11BQ08648 103 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 WFDC2Q14508 124 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 Q8IZM0 81 aa8.8□□□□□ -1
GTF2F2-201ENST00000340473 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 A6NJY4 79 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 PRSS2P07478 247 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 SCGB1D4Q6XE38 83 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 C6orf226Q5I0X4 101 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 CFAP161Q6P656 301 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 NDUFA12Q9UI09 145 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 RYR2Q92736 4967 aa8.78□□□□□ -1
GTF2F2-201ENST00000340473 GVQW2A0A096LPI5 108 aaPredicted RBP8.77□□□□□ -1.01
GTF2F2-201ENST00000340473 C2orf82Q6UX34 121 aa8.77□□□□□ -1.01
GTF2F2-201ENST00000340473 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
GTF2F2-201ENST00000340473 LRCOL1A6NCL2 159 aa8.76□□□□□ -1.01
GTF2F2-201ENST00000340473 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
GTF2F2-201ENST00000340473 NDUFA1O15239 70 aa8.76□□□□□ -1.01
GTF2F2-201ENST00000340473 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
GTF2F2-201ENST00000340473 F8W1H4 67 aa8.76□□□□□ -1.01
GTF2F2-201ENST00000340473 C21orf62-AS1Q17RA5 79 aa8.75□□□□□ -1.01
GTF2F2-201ENST00000340473 CKS1BP61024 79 aa8.74□□□□□ -1.01
GTF2F2-201ENST00000340473 SRSF9Q13242 221 aaKnown RBP eCLIP8.74□□□□□ -1.01
GTF2F2-201ENST00000340473 C10orf25Q5T742 122 aa8.74□□□□□ -1.01
GTF2F2-201ENST00000340473 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
GTF2F2-201ENST00000340473 RTL8CO15255 209 aa8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 CXCL5P42830 114 aa8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 FRAS1Q86XX4 4008 aa8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 A0A0J9YXY3 114 aa8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 SLPIP03973 132 aa8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
GTF2F2-201ENST00000340473 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
GTF2F2-201ENST00000340473 CAMK2N2Q96S95 79 aa8.72□□□□□ -1.01
GTF2F2-201ENST00000340473 A0A087WTM6 91 aa8.72□□□□□ -1.01
GTF2F2-201ENST00000340473 Q6ZRU5 148 aa8.72□□□□□ -1.01
GTF2F2-201ENST00000340473 HERV-K104P63124 156 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 RPL24P83731 157 aaKnown RBP8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 H3BMG7 143 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 J3QR89 54 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 TNP2Q05952 138 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 LYRM7Q5U5X0 104 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 PGPEP1Q9NXJ5 209 aa8.7□□□□□ -1.02
GTF2F2-201ENST00000340473 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.69□□□□□ -1.02
GTF2F2-201ENST00000340473 SYCNQ0VAF6 134 aa8.69□□□□□ -1.02
GTF2F2-201ENST00000340473 Q8N814 137 aa8.69□□□□□ -1.02
GTF2F2-201ENST00000340473 F8WDY8 70 aa8.69□□□□□ -1.02
GTF2F2-201ENST00000340473 LITAFQ99732 161 aa8.69□□□□□ -1.02
GTF2F2-201ENST00000340473 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 CARD19Q96LW7 228 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 PFN2P35080 140 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 ADAMTSL4-AS1Q5T5F5 129 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 ERG28Q9UKR5 140 aa8.68□□□□□ -1.02
GTF2F2-201ENST00000340473 CNBPP62633 177 aaKnown RBP8.66□□□□□ -1.02
GTF2F2-201ENST00000340473 DAND5Q8N907 189 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms