RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
CPSF7-201ENST00000340437 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
CPSF7-201ENST00000340437 Q6Q795 121 aa10.11□□□□□ -0.79
CPSF7-201ENST00000340437 TRACP01848 142 aa10.11□□□□□ -0.79
CPSF7-201ENST00000340437 PLAC8L1A1L4L8 177 aa10.1□□□□□ -0.79
CPSF7-201ENST00000340437 FHL2Q14192 279 aa10.1□□□□□ -0.79
CPSF7-201ENST00000340437 IL17DQ8TAD2 202 aa10.1□□□□□ -0.79
CPSF7-201ENST00000340437 J3QKU1 62 aa10.09□□□□□ -0.79
CPSF7-201ENST00000340437 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
CPSF7-201ENST00000340437 TRBV6-4A0A1B0GX49 114 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 DEFB135Q30KP9 77 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 Q8N3U1 123 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 TENM4Q6N022 2769 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 C9orf153Q5TBE3 101 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
CPSF7-201ENST00000340437 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
CPSF7-201ENST00000340437 LINC00643Q86TS7 51 aa10.07□□□□□ -0.8
CPSF7-201ENST00000340437 LINC00959A0A1B0GUT2 108 aa10.07□□□□□ -0.8
CPSF7-201ENST00000340437 INAFM2P0DMQ5 153 aa10.07□□□□□ -0.8
CPSF7-201ENST00000340437 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
CPSF7-201ENST00000340437 INAFM1C9JVW0 142 aa10.06□□□□□ -0.8
CPSF7-201ENST00000340437 ACYP1P07311 99 aa10.06□□□□□ -0.8
CPSF7-201ENST00000340437 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
CPSF7-201ENST00000340437 MRPL23Q16540 153 aaKnown RBP10.06□□□□□ -0.8
CPSF7-201ENST00000340437 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
CPSF7-201ENST00000340437 LINC01600Q96MT4 127 aa10.05□□□□□ -0.8
CPSF7-201ENST00000340437 VWFP04275 2813 aa10.05□□□□□ -0.8
CPSF7-201ENST00000340437 SS18Q15532 418 aa10.05□□□□□ -0.8
CPSF7-201ENST00000340437 A0A087WVE0 104 aa10.04□□□□□ -0.8
CPSF7-201ENST00000340437 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-201ENST00000340437 KRTAP1-3Q8IUG1 177 aa10.04□□□□□ -0.8
CPSF7-201ENST00000340437 LINC00269Q8N2A0 174 aa10.04□□□□□ -0.8
CPSF7-201ENST00000340437 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
CPSF7-201ENST00000340437 ANGP03950 147 aaKnown RBP10.03□□□□□ -0.8
CPSF7-201ENST00000340437 HIST1H4AP62805 103 aaKnown RBP10.03□□□□□ -0.8
CPSF7-201ENST00000340437 A0A087WZ39 114 aa10.03□□□□□ -0.8
CPSF7-201ENST00000340437 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
CPSF7-201ENST00000340437 TMEM86BQ8N661 226 aa10.03□□□□□ -0.8
CPSF7-201ENST00000340437 PDZD2O15018 2839 aa10.03□□□□□ -0.8
CPSF7-201ENST00000340437 FAM19A3Q7Z5A8 133 aa10.02□□□□□ -0.8
CPSF7-201ENST00000340437 IBA57-AS1B1ANH7 110 aa10.02□□□□□ -0.81
CPSF7-201ENST00000340437 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
CPSF7-201ENST00000340437 LRRC75A-AS1Q8N1F1 130 aa10.02□□□□□ -0.81
CPSF7-201ENST00000340437 NSD1Q96L73 2696 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-201ENST00000340437 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
CPSF7-201ENST00000340437 WFDC9Q8NEX5 89 aa10.01□□□□□ -0.81
CPSF7-201ENST00000340437 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
CPSF7-201ENST00000340437 LINC00846Q9NV44 126 aa10.01□□□□□ -0.81
CPSF7-201ENST00000340437 H0YGX0 51 aa10□□□□□ -0.81
CPSF7-201ENST00000340437 FAM222AQ5U5X8 452 aa10□□□□□ -0.81
CPSF7-201ENST00000340437 CXCL5P42830 114 aa9.99□□□□□ -0.81
CPSF7-201ENST00000340437 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-201ENST00000340437 OVOL2Q9BRP0 275 aa9.99□□□□□ -0.81
CPSF7-201ENST00000340437 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
CPSF7-201ENST00000340437 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
CPSF7-201ENST00000340437 S100A7L2Q5SY68 101 aa9.97□□□□□ -0.81
CPSF7-201ENST00000340437 FBN1P35555 2871 aaKnown RBP9.97□□□□□ -0.81
CPSF7-201ENST00000340437 A0A1B0GX51 115 aa9.97□□□□□ -0.81
CPSF7-201ENST00000340437 FAM110AQ9BQ89 295 aa9.96□□□□□ -0.81
CPSF7-201ENST00000340437 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-201ENST00000340437 C6orf223Q8N319 242 aa9.96□□□□□ -0.82
CPSF7-201ENST00000340437 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
CPSF7-201ENST00000340437 SPATA3Q8NHX4 192 aa9.96□□□□□ -0.82
CPSF7-201ENST00000340437 OTOGQ6ZRI0 2925 aa9.96□□□□□ -0.82
CPSF7-201ENST00000340437 hADV29S1A0JD25 119 aa9.95□□□□□ -0.82
CPSF7-201ENST00000340437 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-201ENST00000340437 PRO0255Q9UI72 69 aa9.95□□□□□ -0.82
CPSF7-201ENST00000340437 IMUPQ9GZP8 106 aa9.95□□□□□ -0.82
CPSF7-201ENST00000340437 LY6G6DO95868 133 aa9.94□□□□□ -0.82
CPSF7-201ENST00000340437 C6orf99Q4VX62 202 aa9.94□□□□□ -0.82
CPSF7-201ENST00000340437 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
CPSF7-201ENST00000340437 BAHCC1Q9P281 2608 aa9.93□□□□□ -0.82
CPSF7-201ENST00000340437 DAD1P61803 113 aa9.93□□□□□ -0.82
CPSF7-201ENST00000340437 REG3AQ06141 175 aa9.93□□□□□ -0.82
CPSF7-201ENST00000340437 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
CPSF7-201ENST00000340437 HILS1P60008 231 aa9.92□□□□□ -0.82
CPSF7-201ENST00000340437 LAMTOR3Q9UHA4 124 aa9.92□□□□□ -0.82
CPSF7-201ENST00000340437 UQCRQO14949 82 aa9.91□□□□□ -0.82
CPSF7-201ENST00000340437 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
CPSF7-201ENST00000340437 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
CPSF7-201ENST00000340437 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.82
CPSF7-201ENST00000340437 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
CPSF7-201ENST00000340437 Q8IZM0 81 aa9.9□□□□□ -0.82
CPSF7-201ENST00000340437 KRTAP10-3P60369 221 aa9.9□□□□□ -0.82
CPSF7-201ENST00000340437 X6R8D5 127 aa9.9□□□□□ -0.82
CPSF7-201ENST00000340437 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
CPSF7-201ENST00000340437 PPDPFQ9H3Y8 114 aa9.89□□□□□ -0.83
CPSF7-201ENST00000340437 XAGE1AQ9HD64 81 aa9.89□□□□□ -0.83
CPSF7-201ENST00000340437 Q8N814 137 aa9.89□□□□□ -0.83
CPSF7-201ENST00000340437 COX7CP15954 63 aa9.88□□□□□ -0.83
CPSF7-201ENST00000340437 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
CPSF7-201ENST00000340437 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
CPSF7-201ENST00000340437 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 Q8NDZ9 215 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 ATOX1O00244 68 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 KRTAP1-1Q07627 177 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 FAM19A1Q7Z5A9 133 aa9.87□□□□□ -0.83
CPSF7-201ENST00000340437 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms