RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 UQCRQO14949 82 aa10□□□□□ -0.81
PCDH8-201ENST00000338862 HILS1P60008 231 aa10□□□□□ -0.81
PCDH8-201ENST00000338862 RNF152Q8N8N0 203 aa10□□□□□ -0.81
PCDH8-201ENST00000338862 F5H768 121 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 M0QXV9 152 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 LINC00482Q8N8I6 264 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 DSCR8Q96T75 97 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 H0YGX0 51 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 BEAN1Q3B7T3 259 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 C16orf74Q96GX8 76 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
PCDH8-201ENST00000338862 LRRC75A-AS1Q8N1F1 130 aa9.98□□□□□ -0.81
PCDH8-201ENST00000338862 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
PCDH8-201ENST00000338862 DEFB113Q30KQ7 82 aa9.98□□□□□ -0.81
PCDH8-201ENST00000338862 UNC79Q9P2D8 2635 aa9.98□□□□□ -0.81
PCDH8-201ENST00000338862 UBR5O95071 2799 aaPredicted RBP9.98□□□□□ -0.81
PCDH8-201ENST00000338862 ATOX1O00244 68 aa9.98□□□□□ -0.81
PCDH8-201ENST00000338862 Q8N3U1 123 aa9.98□□□□□ -0.81
PCDH8-201ENST00000338862 IGKV2-28A0A075B6P5 120 aa9.97□□□□□ -0.81
PCDH8-201ENST00000338862 IGKV2D-28P01615 120 aa9.97□□□□□ -0.81
PCDH8-201ENST00000338862 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
PCDH8-201ENST00000338862 BBC3Q96PG8 261 aaPredicted RBP9.97□□□□□ -0.81
PCDH8-201ENST00000338862 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
PCDH8-201ENST00000338862 DEFB135Q30KP9 77 aa9.97□□□□□ -0.81
PCDH8-201ENST00000338862 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.81
PCDH8-201ENST00000338862 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.81
PCDH8-201ENST00000338862 RPL18AQ02543 176 aaKnown RBP9.96□□□□□ -0.81
PCDH8-201ENST00000338862 C20orf197Q8N268 126 aa9.96□□□□□ -0.81
PCDH8-201ENST00000338862 UBL5Q9BZL1 73 aa9.96□□□□□ -0.81
PCDH8-201ENST00000338862 USP17L23D6RBM5 183 aa9.96□□□□□ -0.82
PCDH8-201ENST00000338862 GHRHP01286 108 aa9.96□□□□□ -0.82
PCDH8-201ENST00000338862 XAGE1AQ9HD64 81 aa9.96□□□□□ -0.82
PCDH8-201ENST00000338862 COX7CP15954 63 aa9.95□□□□□ -0.82
PCDH8-201ENST00000338862 RPL28P46779 137 aaKnown RBP9.95□□□□□ -0.82
PCDH8-201ENST00000338862 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
PCDH8-201ENST00000338862 FAM19A1Q7Z5A9 133 aa9.95□□□□□ -0.82
PCDH8-201ENST00000338862 KIR2DL5BQ8NHK3 375 aa9.94□□□□□ -0.82
PCDH8-201ENST00000338862 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
PCDH8-201ENST00000338862 FAM110AQ9BQ89 295 aa9.93□□□□□ -0.82
PCDH8-201ENST00000338862 TEP1Q99973 2627 aaKnown RBP9.92□□□□□ -0.82
PCDH8-201ENST00000338862 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
PCDH8-201ENST00000338862 FAM222AQ5U5X8 452 aa9.92□□□□□ -0.82
PCDH8-201ENST00000338862 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
PCDH8-201ENST00000338862 J3KT08 172 aa9.91□□□□□ -0.82
PCDH8-201ENST00000338862 ITPR2Q14571 2701 aa9.91□□□□□ -0.82
PCDH8-201ENST00000338862 DAD1P61803 113 aa9.91□□□□□ -0.82
PCDH8-201ENST00000338862 IGHV3OR16-9A0A0B4J2B5 98 aa9.91□□□□□ -0.82
PCDH8-201ENST00000338862 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
PCDH8-201ENST00000338862 C6orf223Q8N319 242 aa9.91□□□□□ -0.82
PCDH8-201ENST00000338862 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.82
PCDH8-201ENST00000338862 CHCHD10Q8WYQ3 142 aaPredicted RBP9.9□□□□□ -0.82
PCDH8-201ENST00000338862 FHL2Q14192 279 aa9.9□□□□□ -0.82
PCDH8-201ENST00000338862 LINC01006Q8NI28 216 aa9.9□□□□□ -0.83
PCDH8-201ENST00000338862 FAM19A5Q7Z5A7 132 aaPredicted RBP9.89□□□□□ -0.83
PCDH8-201ENST00000338862 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
PCDH8-201ENST00000338862 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
PCDH8-201ENST00000338862 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
PCDH8-201ENST00000338862 SNURFQ9Y675 71 aa9.88□□□□□ -0.83
PCDH8-201ENST00000338862 A0A087WZ39 114 aa9.88□□□□□ -0.83
PCDH8-201ENST00000338862 HIGD2BQ4VC39 106 aa9.88□□□□□ -0.83
PCDH8-201ENST00000338862 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
PCDH8-201ENST00000338862 REG3AQ06141 175 aa9.87□□□□□ -0.83
PCDH8-201ENST00000338862 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
PCDH8-201ENST00000338862 SMR3AQ99954 134 aa9.87□□□□□ -0.83
PCDH8-201ENST00000338862 RBM3P98179 157 aaKnown RBP9.86□□□□□ -0.83
PCDH8-201ENST00000338862 DEFB121Q5J5C9 76 aa9.86□□□□□ -0.83
PCDH8-201ENST00000338862 Q6ZQY7 126 aa9.86□□□□□ -0.83
PCDH8-201ENST00000338862 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
PCDH8-201ENST00000338862 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
PCDH8-201ENST00000338862 IGHV4-28A0A0C4DH34 117 aa9.85□□□□□ -0.83
PCDH8-201ENST00000338862 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
PCDH8-201ENST00000338862 CYSTM1Q9H1C7 97 aa9.84□□□□□ -0.83
PCDH8-201ENST00000338862 Q8N814 137 aa9.83□□□□□ -0.84
PCDH8-201ENST00000338862 PRB2P02812 416 aaPredicted RBP9.83□□□□□ -0.84
PCDH8-201ENST00000338862 CMC4P56277 68 aaPredicted RBP9.83□□□□□ -0.84
PCDH8-201ENST00000338862 CR1P17927 2039 aa9.83□□□□□ -0.84
PCDH8-201ENST00000338862 JMJD7-PLA2G4BH0Y9G9 81 aa9.83□□□□□ -0.84
PCDH8-201ENST00000338862 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
PCDH8-201ENST00000338862 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
PCDH8-201ENST00000338862 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
PCDH8-201ENST00000338862 HIVEP1P15822 2718 aa9.81□□□□□ -0.84
PCDH8-201ENST00000338862 CCKP06307 115 aa9.81□□□□□ -0.84
PCDH8-201ENST00000338862 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
PCDH8-201ENST00000338862 C10orf25Q5T742 122 aa9.8□□□□□ -0.84
PCDH8-201ENST00000338862 Q6JHZ5 121 aa9.8□□□□□ -0.84
PCDH8-201ENST00000338862 ZNF843Q8N446 348 aa9.8□□□□□ -0.84
PCDH8-201ENST00000338862 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
PCDH8-201ENST00000338862 A0A096LNT2 108 aa9.78□□□□□ -0.84
PCDH8-201ENST00000338862 CYSRT1A8MQ03 144 aa9.78□□□□□ -0.84
PCDH8-201ENST00000338862 PLAC8L1A1L4L8 177 aa9.77□□□□□ -0.85
PCDH8-201ENST00000338862 IGLV1-51P01701 117 aa9.77□□□□□ -0.85
PCDH8-201ENST00000338862 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
PCDH8-201ENST00000338862 Q8IZM0 81 aa9.77□□□□□ -0.85
PCDH8-201ENST00000338862 CAMK2N2Q96S95 79 aa9.77□□□□□ -0.85
PCDH8-201ENST00000338862 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
PCDH8-201ENST00000338862 Q8N9L7 120 aa9.76□□□□□ -0.85
PCDH8-201ENST00000338862 NOTCH1P46531 2555 aa9.76□□□□□ -0.85
PCDH8-201ENST00000338862 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
PCDH8-201ENST00000338862 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms