RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SMIM9A6NGZ8 99 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 IBA57-AS1B1ANH7 110 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 SNCGO76070 127 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 GAGE4Q13068 117 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 GAGE5Q13069 117 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 MEIG1Q5JSS6 88 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 NOP10Q9NPE3 64 aaKnown RBP7.55□□□□□ -1.2
RTN3-201ENST00000338850 RYR3Q15413 4870 aa7.55□□□□□ -1.2
RTN3-201ENST00000338850 A0A087WZ39 114 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 TRAV13-1A0A0B4J241 112 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 IGHV3OR16-9A0A0B4J2B5 98 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 TRBV7-7A0A0K0K1E9 115 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 FHL2Q14192 279 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 IMUPQ9GZP8 106 aa7.54□□□□□ -1.2
RTN3-201ENST00000338850 TRGV2A0A075B6R0 118 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 GAGE2BQ13066 116 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 GAGE2EQ4V326 116 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 DAND5Q8N907 189 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 CLEC2BQ92478 149 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 GAGE2DQ9UEU5 116 aa7.53□□□□□ -1.2
RTN3-201ENST00000338850 TRGV4A0A0C4DH28 118 aa7.52□□□□□ -1.21
RTN3-201ENST00000338850 C3orf84H3BNL1 204 aa7.52□□□□□ -1.21
RTN3-201ENST00000338850 CRPP02741 224 aa7.52□□□□□ -1.21
RTN3-201ENST00000338850 INAFM2P0DMQ5 153 aa7.52□□□□□ -1.21
RTN3-201ENST00000338850 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.21
RTN3-201ENST00000338850 H0YGX0 51 aa7.51□□□□□ -1.21
RTN3-201ENST00000338850 GAGE7O76087 117 aa7.51□□□□□ -1.21
RTN3-201ENST00000338850 GAGE12FP0CL80 117 aa7.51□□□□□ -1.21
RTN3-201ENST00000338850 GAGE12GP0CL81 117 aa7.51□□□□□ -1.21
RTN3-201ENST00000338850 GAGE12IP0CL82 117 aa7.51□□□□□ -1.21
RTN3-201ENST00000338850 MUC7Q8TAX7 377 aa7.51□□□□□ -1.21
RTN3-201ENST00000338850 NPC2P61916 151 aa7.5□□□□□ -1.21
RTN3-201ENST00000338850 C15orf53Q8NAA6 179 aa7.5□□□□□ -1.21
RTN3-201ENST00000338850 A0A1B0GX51 115 aa7.49□□□□□ -1.21
RTN3-201ENST00000338850 IGHV4-30-4P0DP06 118 aa7.49□□□□□ -1.21
RTN3-201ENST00000338850 CXCL5P42830 114 aa7.49□□□□□ -1.21
RTN3-201ENST00000338850 Q8IZM0 81 aa7.49□□□□□ -1.21
RTN3-201ENST00000338850 ANAPC13Q9BS18 74 aa7.49□□□□□ -1.21
RTN3-201ENST00000338850 DYNC2H1Q8NCM8 4307 aaKnown RBP7.48□□□□□ -1.21
RTN3-201ENST00000338850 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
RTN3-201ENST00000338850 NDUFV3P56181 108 aaKnown RBP7.48□□□□□ -1.21
RTN3-201ENST00000338850 CASC10Q5T4H9 136 aa7.48□□□□□ -1.21
RTN3-201ENST00000338850 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
RTN3-201ENST00000338850 TM2D3Q9BRN9 247 aa7.48□□□□□ -1.21
RTN3-201ENST00000338850 SND1-IT1Q9HBX3 110 aa7.48□□□□□ -1.21
RTN3-201ENST00000338850 TENM2Q9NT68 2774 aa7.48□□□□□ -1.21
RTN3-201ENST00000338850 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
RTN3-201ENST00000338850 RPL35AP18077 110 aaKnown RBP7.47□□□□□ -1.21
RTN3-201ENST00000338850 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
RTN3-201ENST00000338850 DNAH7Q8WXX0 4024 aa7.46□□□□□ -1.21
RTN3-201ENST00000338850 IGLV4-60A0A075B6I1 120 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 IGKV2-28A0A075B6P5 120 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 LOC100131303A0A0U1RQF7 123 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 IGKV2D-28P01615 120 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 ATP5G1P05496 136 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 GAGE6Q13070 117 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 COX17Q14061 63 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 LINC00337Q8N6G1 96 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 PRO0255Q9UI72 69 aa7.46□□□□□ -1.22
RTN3-201ENST00000338850 NDUFC2O95298 119 aa7.45□□□□□ -1.22
RTN3-201ENST00000338850 BAALC-AS2P0C853 105 aa7.45□□□□□ -1.22
RTN3-201ENST00000338850 CCL18P55774 89 aa7.45□□□□□ -1.22
RTN3-201ENST00000338850 SS18Q15532 418 aa7.45□□□□□ -1.22
RTN3-201ENST00000338850 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
RTN3-201ENST00000338850 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
RTN3-201ENST00000338850 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
RTN3-201ENST00000338850 C22orf24Q9Y442 160 aa7.44□□□□□ -1.22
RTN3-201ENST00000338850 X6R8D5 127 aa7.44□□□□□ -1.22
RTN3-201ENST00000338850 IGHV4-28A0A0C4DH34 117 aa7.43□□□□□ -1.22
RTN3-201ENST00000338850 MALP21145 153 aa7.43□□□□□ -1.22
RTN3-201ENST00000338850 DNAL4O96015 105 aa7.42□□□□□ -1.22
RTN3-201ENST00000338850 GYPEP15421 78 aa7.42□□□□□ -1.22
RTN3-201ENST00000338850 LINC00158P58513 81 aa7.42□□□□□ -1.22
RTN3-201ENST00000338850 FAM218AQ96MZ4 157 aa7.42□□□□□ -1.22
RTN3-201ENST00000338850 RYR2Q92736 4967 aa7.42□□□□□ -1.22
RTN3-201ENST00000338850 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
RTN3-201ENST00000338850 LCE6AA0A183 80 aa7.41□□□□□ -1.22
RTN3-201ENST00000338850 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
RTN3-201ENST00000338850 SMIM11BQ8TCY0 68 aa7.41□□□□□ -1.22
RTN3-201ENST00000338850 APOC4P55056 127 aa7.4□□□□□ -1.22
RTN3-201ENST00000338850 RETNQ9HD89 108 aa7.4□□□□□ -1.22
RTN3-201ENST00000338850 TOMM7Q9P0U1 55 aa7.4□□□□□ -1.22
RTN3-201ENST00000338850 SACSQ9NZJ4 4579 aa7.4□□□□□ -1.22
RTN3-201ENST00000338850 C6orf226Q5I0X4 101 aa7.39□□□□□ -1.23
RTN3-201ENST00000338850 C5orf38Q86SI9 138 aa7.39□□□□□ -1.23
RTN3-201ENST00000338850 KIAA0087Q14695 138 aa7.38□□□□□ -1.23
RTN3-201ENST00000338850 CSMD3Q7Z407 3707 aa7.38□□□□□ -1.23
RTN3-201ENST00000338850 H3BQ85 93 aa7.37□□□□□ -1.23
RTN3-201ENST00000338850 PAX4O43316 350 aa7.37□□□□□ -1.23
RTN3-201ENST00000338850 MIFP14174 115 aa7.37□□□□□ -1.23
RTN3-201ENST00000338850 KLK5Q9Y337 293 aaPredicted RBP7.37□□□□□ -1.23
RTN3-201ENST00000338850 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
RTN3-201ENST00000338850 STARD9Q9P2P6 4700 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms