RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TINCRA0A1B0GVN0 87 aa9.49□□□□□ -0.89
PRKN-201ENST00000338468 LINC00614P0C842 121 aa9.49□□□□□ -0.89
PRKN-201ENST00000338468 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
PRKN-201ENST00000338468 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
PRKN-201ENST00000338468 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 TRBV30A0A0K0K1B3 111 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 PMVKQ15126 192 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 PMCHL1Q16048 86 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 Q8IZM0 81 aa9.48□□□□□ -0.89
PRKN-201ENST00000338468 TOMM7Q9P0U1 55 aa9.47□□□□□ -0.89
PRKN-201ENST00000338468 FAM168BA1KXE4 195 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 SMIM1B2RUZ4 78 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
PRKN-201ENST00000338468 HBDP02042 147 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 PRSS2P07478 247 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 C6orf226Q5I0X4 101 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 PACRGQ96M98 296 aaPredicted RBP9.45□□□□□ -0.9
PRKN-201ENST00000338468 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
PRKN-201ENST00000338468 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
PRKN-201ENST00000338468 PHF5AQ7RTV0 110 aaKnown RBP9.44□□□□□ -0.9
PRKN-201ENST00000338468 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
PRKN-201ENST00000338468 RAB5BP61020 215 aa9.43□□□□□ -0.9
PRKN-201ENST00000338468 CKS1BP61024 79 aa9.43□□□□□ -0.9
PRKN-201ENST00000338468 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
PRKN-201ENST00000338468 SPINK8P0C7L1 97 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 TNXBP22105 4242 aa9.42□□□□□ -0.9
PRKN-201ENST00000338468 F8VRH5 84 aa9.41□□□□□ -0.9
PRKN-201ENST00000338468 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
PRKN-201ENST00000338468 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
PRKN-201ENST00000338468 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
PRKN-201ENST00000338468 NDUFA6P56556 154 aa9.4□□□□□ -0.9
PRKN-201ENST00000338468 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
PRKN-201ENST00000338468 ATP5LO75964 103 aa9.39□□□□□ -0.91
PRKN-201ENST00000338468 TRGC2P03986 189 aa9.39□□□□□ -0.91
PRKN-201ENST00000338468 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
PRKN-201ENST00000338468 CXCL5P42830 114 aa9.39□□□□□ -0.91
PRKN-201ENST00000338468 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
PRKN-201ENST00000338468 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
PRKN-201ENST00000338468 C11orf86A6NJI1 115 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 COLCA2A8K830 154 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 H3BRM9 83 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
PRKN-201ENST00000338468 M0QXV9 152 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 LINC00310P59036 64 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
PRKN-201ENST00000338468 C1orf137Q5JT78 98 aa9.34□□□□□ -0.91
PRKN-201ENST00000338468 FAM19A2Q8N3H0 131 aa9.34□□□□□ -0.91
PRKN-201ENST00000338468 IFI27L1Q96BM0 104 aa9.34□□□□□ -0.91
PRKN-201ENST00000338468 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
PRKN-201ENST00000338468 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
PRKN-201ENST00000338468 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
PRKN-201ENST00000338468 HSBP1O75506 76 aa9.32□□□□□ -0.92
PRKN-201ENST00000338468 CHTOPQ9Y3Y2 248 aaKnown RBP9.32□□□□□ -0.92
PRKN-201ENST00000338468 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
PRKN-201ENST00000338468 SERF1AO75920 110 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 LRP2P98164 4655 aa9.31□□□□□ -0.92
PRKN-201ENST00000338468 NUPR1O60356 82 aa9.3□□□□□ -0.92
PRKN-201ENST00000338468 SCO1O75880 301 aa9.29□□□□□ -0.92
PRKN-201ENST00000338468 UBE2BP63146 152 aa9.29□□□□□ -0.92
PRKN-201ENST00000338468 ODF1Q14990 250 aa9.29□□□□□ -0.92
PRKN-201ENST00000338468 TMEM223A0PJW6 202 aa9.28□□□□□ -0.92
PRKN-201ENST00000338468 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
PRKN-201ENST00000338468 ZNF625Q96I27 306 aaPredicted RBP9.28□□□□□ -0.92
PRKN-201ENST00000338468 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
PRKN-201ENST00000338468 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
PRKN-201ENST00000338468 PFN2P35080 140 aa9.26□□□□□ -0.93
PRKN-201ENST00000338468 ERG28Q9UKR5 140 aa9.26□□□□□ -0.93
PRKN-201ENST00000338468 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
PRKN-201ENST00000338468 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
PRKN-201ENST00000338468 LBHQ53QV2 105 aaPredicted RBP9.25□□□□□ -0.93
PRKN-201ENST00000338468 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
PRKN-201ENST00000338468 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
PRKN-201ENST00000338468 H0Y8G0 127 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 H0Y9J4 135 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 DIRC1Q969H9 104 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
PRKN-201ENST00000338468 COX17Q14061 63 aa9.22□□□□□ -0.93
PRKN-201ENST00000338468 Q8NDZ9 215 aa9.22□□□□□ -0.93
PRKN-201ENST00000338468 HIST1H2BKO60814 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BJP06899 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 FABP4P15090 132 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BOP23527 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BBP33778 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BDP58876 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BCP62807 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST2H2BEQ16778 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.21□□□□□ -0.94
PRKN-201ENST00000338468 SFTA2Q6UW10 78 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BHQ93079 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BNQ99877 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 HIST1H2BMQ99879 126 aa9.21□□□□□ -0.94
PRKN-201ENST00000338468 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 201.2 ms