RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
CAPN3-202ENST00000337571 TMEM141Q96I45 108 aa6.54□□□□□ -1.36
CAPN3-202ENST00000337571 PACRGQ96M98 296 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-202ENST00000337571 C2orf88Q9BSF0 95 aa6.54□□□□□ -1.36
CAPN3-202ENST00000337571 MAP1LC3AQ9H492 121 aa6.54□□□□□ -1.36
CAPN3-202ENST00000337571 GAGE2DQ9UEU5 116 aa6.54□□□□□ -1.36
CAPN3-202ENST00000337571 TRGC2P03986 189 aa6.53□□□□□ -1.36
CAPN3-202ENST00000337571 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-202ENST00000337571 C6orf48Q9UBA6 75 aa6.53□□□□□ -1.36
CAPN3-202ENST00000337571 LAMTOR2Q9Y2Q5 125 aa6.53□□□□□ -1.36
CAPN3-202ENST00000337571 IGLV4-3A0A075B6K6 122 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 TRBV30A0A0K0K1B3 111 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 LOC105371267A0A1B0GV96 52 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 FAM168BA1KXE4 195 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 PRSS2P07478 247 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 S100PP25815 95 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 UBE2BP63146 152 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 LINC00242Q5T6M2 205 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 VCX2Q9H322 139 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 CYSLTR1Q9Y271 337 aa6.52□□□□□ -1.37
CAPN3-202ENST00000337571 LRP2P98164 4655 aa6.51□□□□□ -1.37
CAPN3-202ENST00000337571 PRSS47A8MTI9 375 aa6.51□□□□□ -1.37
CAPN3-202ENST00000337571 G0S2P27469 103 aa6.51□□□□□ -1.37
CAPN3-202ENST00000337571 CKS1BP61024 79 aa6.51□□□□□ -1.37
CAPN3-202ENST00000337571 Q8N8P6 123 aa6.51□□□□□ -1.37
CAPN3-202ENST00000337571 NDUFC2-KCTD14E9PQ53 114 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BKO60814 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BJP06899 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BOP23527 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BBP33778 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BDP58876 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BCP62807 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 FABP9Q0Z7S8 132 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 KIAA0087Q14695 138 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST2H2BEQ16778 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 C6orf226Q5I0X4 101 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-202ENST00000337571 C2orf66Q6UXQ4 117 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BHQ93079 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BNQ99877 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 HIST1H2BMQ99879 126 aa6.5□□□□□ -1.37
CAPN3-202ENST00000337571 H0Y9J4 135 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 K7EMI3 77 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 M0QXV9 152 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 UBE2D1P51668 147 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 PAPPA-AS1Q5QFB9 102 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 GNB1LQ9BYB4 327 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 TOMM7Q9P0U1 55 aa6.49□□□□□ -1.37
CAPN3-202ENST00000337571 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
CAPN3-202ENST00000337571 NPSP0C0P6 89 aa6.48□□□□□ -1.37
CAPN3-202ENST00000337571 SEC11AP67812 179 aa6.48□□□□□ -1.37
CAPN3-202ENST00000337571 LCE4AQ5TA78 99 aa6.48□□□□□ -1.37
CAPN3-202ENST00000337571 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
CAPN3-202ENST00000337571 ALKBH7Q9BT30 221 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-202ENST00000337571 TRAPPC1Q9Y5R8 145 aa6.48□□□□□ -1.37
CAPN3-202ENST00000337571 KIAA1644Q3SXP7 199 aa6.47□□□□□ -1.37
CAPN3-202ENST00000337571 ZC2HC1BQ5TFG8 222 aa6.47□□□□□ -1.37
CAPN3-202ENST00000337571 AMELXQ99217 191 aa6.47□□□□□ -1.37
CAPN3-202ENST00000337571 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
CAPN3-202ENST00000337571 NXT2Q9NPJ8 142 aaKnown RBP6.47□□□□□ -1.37
CAPN3-202ENST00000337571 C5orf52A6NGY3 159 aa6.46□□□□□ -1.38
CAPN3-202ENST00000337571 NUPR1O60356 82 aa6.46□□□□□ -1.38
CAPN3-202ENST00000337571 RAB5BP61020 215 aa6.46□□□□□ -1.38
CAPN3-202ENST00000337571 HERVK_113P63121 156 aa6.46□□□□□ -1.38
CAPN3-202ENST00000337571 LBHQ53QV2 105 aaPredicted RBP6.46□□□□□ -1.38
CAPN3-202ENST00000337571 KRTAP11-1Q8IUC1 163 aa6.46□□□□□ -1.38
CAPN3-202ENST00000337571 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
CAPN3-202ENST00000337571 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
CAPN3-202ENST00000337571 SNRPEP62304 92 aaKnown RBP6.45□□□□□ -1.38
CAPN3-202ENST00000337571 COX19Q49B96 90 aa6.45□□□□□ -1.38
CAPN3-202ENST00000337571 COA6Q5JTJ3 125 aaKnown RBP6.45□□□□□ -1.38
CAPN3-202ENST00000337571 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
CAPN3-202ENST00000337571 Q8IZM0 81 aa6.45□□□□□ -1.38
CAPN3-202ENST00000337571 RPL13AP40429 203 aaKnown RBP6.44□□□□□ -1.38
CAPN3-202ENST00000337571 NDUFA6P56556 154 aa6.44□□□□□ -1.38
CAPN3-202ENST00000337571 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
CAPN3-202ENST00000337571 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
CAPN3-202ENST00000337571 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
CAPN3-202ENST00000337571 LINC00469Q8N7U9 141 aa6.44□□□□□ -1.38
CAPN3-202ENST00000337571 URB1-AS1Q96HZ7 61 aa6.44□□□□□ -1.38
CAPN3-202ENST00000337571 F8VRH5 84 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 SCGB3A1Q96QR1 104 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 TIMM17AQ99595 171 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 C22orf24Q9Y442 160 aa6.43□□□□□ -1.38
CAPN3-202ENST00000337571 ZNF861PO60384 105 aa6.42□□□□□ -1.38
CAPN3-202ENST00000337571 ERASQ7Z444 233 aa6.42□□□□□ -1.38
CAPN3-202ENST00000337571 TOMM6Q96B49 74 aa6.42□□□□□ -1.38
CAPN3-202ENST00000337571 LINC01549A6NIU2 74 aa6.41□□□□□ -1.38
CAPN3-202ENST00000337571 CXCL5P42830 114 aa6.41□□□□□ -1.38
CAPN3-202ENST00000337571 HIST3H2BBQ8N257 126 aa6.41□□□□□ -1.38
CAPN3-202ENST00000337571 C18orf32Q8TCD1 76 aa6.41□□□□□ -1.38
CAPN3-202ENST00000337571 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.38
CAPN3-202ENST00000337571 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms